CmaCh00G002980 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATATGAAAGGGAGCAATCCGGCATCACCTCAAGTGAAGCAACCCCTTCGGAGACGAACCCAGAAATTGAAAACAAAGATCAATTCCTCGATGTTGACATCGACGTCGAAGCAGGTAATGACGAAGTCATTGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAAATGCACAGATCAGTGTTGTTGATTCAAAACTCTCTGTTGAAGTAAACGATACAGTTTTGCACACGTTTACGATCAAATCCCCCGGATCGGAGCAGTTGACCTGTTGA ATGGAATATGAAAGGGAGCAATCCGGCATCACCTCAAGTGAAGCAACCCCTTCGGAGACGAACCCAGAAATTGAAAACAAAGATCAATTCCTCGATGTTGACATCGACGTCGAAGCAGGTAATGACGAAGTCATTGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAAATGCACAGATCAGTGTTGTTGATTCAAAACTCTCTGTTGAAGTAAACGATACAGTTTTGCACACGTTTACGATCAAATCCCCCGGATCGGAGCAGTTGACCTGTTGA ATGGAATATGAAAGGGAGCAATCCGGCATCACCTCAAGTGAAGCAACCCCTTCGGAGACGAACCCAGAAATTGAAAACAAAGATCAATTCCTCGATGTTGACATCGACGTCGAAGCAGGTAATGACGAAGTCATTGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAAATGCACAGATCAGTGTTGTTGATTCAAAACTCTCTGTTGAAGTAAACGATACAGTTTTGCACACGTTTACGATCAAATCCCCCGGATCGGAGCAGTTGACCTGTTGA MEYEREQSGITSSEATPSETNPEIENKDQFLDVDIDVEAGNDEVIVKVSCPLESHPASRVIKAMKNAQISVVDSKLSVEVNDTVLHTFTIKSPGSEQLTC
BLAST of CmaCh00G002980 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 7.0e-12 Identity = 35/67 (52.24%), Postives = 55/67 (82.09%), Query Frame = 1
BLAST of CmaCh00G002980 vs. Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 9.2e-12 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 1
BLAST of CmaCh00G002980 vs. Swiss-Prot
Match: BH003_ARATH (Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.6e-06 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TrEMBL
Match: A0A0A0L748_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119500 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 8.3e-36 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TrEMBL
Match: W9S2H5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023493 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 9.9e-21 Identity = 67/102 (65.69%), Postives = 80/102 (78.43%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TrEMBL
Match: A6NAB4_VITVI (Myc2 bHLH protein OS=Vitis vinifera GN=Myc2 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-20 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TrEMBL
Match: A0A067JX67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14248 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 2.9e-20 Identity = 59/99 (59.60%), Postives = 77/99 (77.78%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TrEMBL
Match: A0A0N9QUR5_PRUAV (BHLH transcription factor OS=Prunus avium GN=bHLH13 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.4e-20 Identity = 56/99 (56.57%), Postives = 72/99 (72.73%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor) HSP 1 Score: 71.2 bits (173), Expect = 4.0e-13 Identity = 35/67 (52.24%), Postives = 55/67 (82.09%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TAIR10
Match: AT1G01260.1 (AT1G01260.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 70.9 bits (172), Expect = 5.2e-13 Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 1
BLAST of CmaCh00G002980 vs. TAIR10
Match: AT4G16430.1 (AT4G16430.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of CmaCh00G002980 vs. NCBI nr
Match: gi|659074943|ref|XP_008437879.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13 [Cucumis melo]) HSP 1 Score: 158.3 bits (399), Expect = 7.0e-36 Identity = 83/99 (83.84%), Postives = 92/99 (92.93%), Query Frame = 1
BLAST of CmaCh00G002980 vs. NCBI nr
Match: gi|449432042|ref|XP_004133809.1| (PREDICTED: transcription factor bHLH13 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of CmaCh00G002980 vs. NCBI nr
Match: gi|700201284|gb|KGN56417.1| (hypothetical protein Csa_3G119500 [Cucumis sativus]) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35 Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1
BLAST of CmaCh00G002980 vs. NCBI nr
Match: gi|703114704|ref|XP_010100724.1| (hypothetical protein L484_023493 [Morus notabilis]) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20 Identity = 67/102 (65.69%), Postives = 80/102 (78.43%), Query Frame = 1
BLAST of CmaCh00G002980 vs. NCBI nr
Match: gi|526118259|ref|NP_001267974.1| (Myc2 bHLH protein [Vitis vinifera]) HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20 Identity = 61/98 (62.24%), Postives = 73/98 (74.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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