CmaCh00G001230 (gene) Cucurbita maxima (Rimu)

NameCmaCh00G001230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
LocationCma_Chr00 : 5540263 .. 5544624 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGACGACAAAGTCGACACCCAAAGCACAAGTCGACCGGCTTACGCTAATAGAGGAGGAAATGCTGTTCCTCAAAGAAGTCCCTGACACCCTCCGCTTCCTGGAAGCACGGGTGACCGAATTGAGTGAGAAAGTCGTAGGAATCGACGCAATGGGCAACCGCCTGGATGGGTTGCCAATCGCAGAATTGATGTTTCGAGTGACCTCGCTCGAAGAAAGAGTTGCTCCTACGAGCAGCCCAAAACCGTCTGGTAGTCCGGATAGCTCTGTCGCGCACAAGGAGGGACGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGCTTGTTCAATGGATTAGCTGATGAGTTCAGAACAACAATCGACGACATCCAAGAAAGGATGGCCTCCATGGGCACTCGAATTGAAGTGACCATGAAAGCCGTGGAGAACGTCACGGCTGGGCAAGCTAATACAGGGTCCAACAAACTAAGATTCCTAGATCCTAGAGCCTTTAAAGGGAATCGGGACGCCAAAGAGTTGGAAAACTTCATCTTTGATGTCGAACAGTACTTCAAAGCCACAACGGCTTGTACTGACGACAAGAAGGTGACCGTAGCCTCGATGTATCTCATAGACGATGCCAAACTGTGGTGGCGTACGAAGGTGCAAGACATCGAGGATGGTTTGTGCACCATTGACTCGTGGGAGGACCTTAAGAAAGAGTTGAGGGACCAGTTCCTCCCCGAAAACGCAGGACATTTAGCAATGGAAAAACTAGTAGCCCTGAAACACACTGGAGGCATACGAGACTATGTCAGACAGTTCTCAACCCTGATGCTAGATATCAGGGGCACATCAGAGAAGGACAAGGTGTTCTTCTTTATAAATGGGTTACAGCCGTGGGCCAAAACAAAACTACACGAGAACAAGGTTCAAACCCTAGCTGACGCAATGGCCTGTGCCGAGAGACTCCTAGACTATGGGAATGAAGCGGGATCCCAAAGAAGAATAACACCAGCCCCAAACACTGGGGGCAAGCCATACAAACCACCAAGTCATCGAAATGGAAGCCCCAACAGGCCGAACGGAGGTAACGACAGACCAAGCGAATGGACGGATAGACCTCCTCAGAACAACCAAGCGGGGACATCTCGAGGACCTTACCATCAAAGGAACCACCCGACGACGCCTTTACAATGCATGTTGTGTAAAGGTCCCCACAAGGTATCTTACTGTCCTCATCGGGCCTCTCTCACTGCGCTCCAAGTGTCCATTCAAGAGAGCAATGACGCAAGGATTGAGACTATGCTTGACAAGAAGGAAGATCAAGACAATCCCCGAATGGGCGCACTTAAATTCTTGTCAGCCCTCCAACGGAAGGTCGAATCGAAGGAGATAGTAGAGAAAGGACTCATGTTCGTAAATGCGACAATAAATTCCCAACCGAATAGGAGCACTCTGATAGATTCAGGAGCGACCCACAACTTCATCGCCGATCAAGAAGCCCGAAGATTAGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGCTGTCAACTCTGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTTAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTTATCCCAATGCCGTTGGCAAAATGCTTAGTGATCACCGATCGCAACCCCACGGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAATTGAAAAGGGGACTCGCGCGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAACAACCAACGAAGAAACTGTCCCAAATGAAATCAATGAGGTACTAAACGACTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTACCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCGGAGTTAAACCGCCAGCGAAGAACGCATACCGGATGGCTCCACCCGAGCTAGCCGAATTAAGGAAACAACTGGATGAGTTGCTGAAGGCGGGATTCATCCGCCCGGCAAAGGCACCCTACGGAGCCCCCGTACTGTTCCAGAAGAAGAAGGATGGGACGTTGCGTCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTGCGCAACAAATATCCACTGCTGATAATATCCGACTTGTTCGACCAACTTCACGGGGCCAAGTATTTCACGAAGTTGGACTTACGATCAGGGTATTACCAAGTACGTATTGCCGAAGGGGATGAGCCCAAGACGACGTGCGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAACGCTCCAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATACCTCGACGACATAGTGGTTTACAGCACAACCCTAGAAGAACACAAAGTGCACTTGAAGCTGGTGTTCGACAAGCTACGACAAAACCAACTGTATGTCAAGAAAGAGAAATGTGCATTCGCACAAACATGCATCAACTTCCTTGGACATGTCGTCAAATGTGGACATATTAGTATGGATAGCGATAAGATAAAAGCTATCCAAGAATGGAAAGTTCCTACTTCCGTATCCGATTTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCGGCCCCATTGACAGAGCTGTTGAAGAAAGACCACACTTGGTCGTGGTCAGATGATTGTCAAATGGCCTTTGAAGATCTGAAAACAACCATGATGAGGGGTCCTGTCCTCGGATTGGTAGATGTTACAAAGCCATTTGAAATAGAAACAGACGCTTCCGACTTTGCCCTAGGTGGGGTCCTTATTCAAGAAGGCCACCCCATCGCTTTCGAAAGTCGAAAGCTCAATGACGTCGAACTTAGATACACTGTCTCCGAAAAAGAAATGCTGGCAGTAGTCCATTGCCTTCGAGTCTGGAGACAATACCTCTTGGGATCACAGTTCGTAGTGAAGACGGATAACAGCGCCATTTGCCACTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGGTGGCAGGAGTCGTTAGCTGAATTCGACTTCAAGTTCGAACACAAAGCAGGGAAGAGCAATCAAGCAGCCGACGCACTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAACCGTCGTCGAACTAGCTAAAGCTGGGAAAACACGACAGTTTTGGGTTGAGGGAGACCTTCTGATGACAAAAGGAAACAGATTGTATGTCCCAAGAACGGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCCGGACACCCTGGGTGGCAAAGAACATACGCTCTAATAAAGAAAGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGTCAACAGGACAAAGTCGAGAAAGCCAAAGTCTCAGGACTCTTGGAACCTCTACCTGTGCCGACAAGACCCTGGGAAAGTGTATCTTTGGACTTCATAACACACCTCCCAAAAGTCGGGGACTATGACGCTATCTTGGTTATCGTAGACCGATTCTCAAAATATGCGACGTTCATCCCCACTCCCAAATTATGCTCGGCCGAACTCACAGCTGAACTATTTTTCAAACACATTGTAAAGTTATGGGGTATTCCGTCGAGCATCATCAGTGATCGGGATGGCAGATTCATTGGGACATTCTGGACCGAGTTATTCGCCTTCTTGGGAACAACCTTAAACATCTCCTCGAGTTACCACCCTCAAACCGATGGTCAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGATGCTCGCCAGAAGAACTGGATACAACTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACCAGCTCGTCTACGGGAAAGAGTCCCTTTGAAATTGTAAGTGGACGACAACCGGCCTTACCCCACATTATCGATCATCCTTATGCAGGGAAAAACCCTCAAGCTCACAACTTCACAAGAGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAAAAGTGGGCAGACAAGAAGCGTCGCCCCCTTCAATTCCGAGCAGGAGATCAAGTCCTCATCAAGCTGAAACCAGAACAGATCAGATTTCGCAACTGA

mRNA sequence

ATGTCGACGACAAAGTCGACACCCAAAGCACAAGTCGACCGGCTTACGCTAATAGAGGAGGAAATGCTGTTCCTCAAAGAAGTCCCTGACACCCTCCGCTTCCTGGAAGCACGGGTGACCGAATTGAGTGAGAAAGTCGTAGGAATCGACGCAATGGGCAACCGCCTGGATGGGTTGCCAATCGCAGAATTGATGTTTCGAGTGACCTCGCTCGAAGAAAGAGTTGCTCCTACGAGCAGCCCAAAACCGTCTGGTAGTCCGGATAGCTCTGTCGCGCACAAGGAGGGACGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGCTTGTTCAATGGATTAGCTGATGAGTTCAGAACAACAATCGACGACATCCAAGAAAGGATGGCCTCCATGGGCACTCGAATTGAAGTGACCATGAAAGCCGTGGAGAACGTCACGGCTGGGCAAGCTAATACAGGGTCCAACAAACTAAGATTCCTAGATCCTAGAGCCTTTAAAGGGAATCGGGACGCCAAAGAGTTGGAAAACTTCATCTTTGATGTCGAACAGTACTTCAAAGCCACAACGGCTTGTACTGACGACAAGAAGGTGACCGTAGCCTCGATGTATCTCATAGACGATGCCAAACTGTGGTGGCGTACGAAGGTGCAAGACATCGAGGATGGTTTGTGCACCATTGACTCGTGGGAGGACCTTAAGAAAGAGTTGAGGGACCAGTTCCTCCCCGAAAACGCAGGACATTTAGCAATGGAAAAACTAGTAGCCCTGAAACACACTGGAGGCATACGAGACTATGTCAGACAGTTCTCAACCCTGATGCTAGATATCAGGGGCACATCAGAGAAGGACAAGGTGTTCTTCTTTATAAATGGGTTACAGCCGTGGGCCAAAACAAAACTACACGAGAACAAGGTTCAAACCCTAGCTGACGCAATGGCCTGTGCCGAGAGACTCCTAGACTATGGGAATGAAGCGGGATCCCAAAGAAGAATAACACCAGCCCCAAACACTGGGGGCAAGCCATACAAACCACCAAGTCATCGAAATGGAAGCCCCAACAGGCCGAACGGAGGTAACGACAGACCAAGCGAATGGACGGATAGACCTCCTCAGAACAACCAAGCGGGGACATCTCGAGGACCTTACCATCAAAGGAACCACCCGACGACGCCTTTACAATGCATGTTGTGTAAAGGTCCCCACAAGGTATCTTACTGTCCTCATCGGGCCTCTCTCACTGCGCTCCAAGTGTCCATTCAAGAGAGCAATGACGCAAGGATTGAGACTATGCTTGACAAGAAGGAAGATCAAGACAATCCCCGAATGGGCGCACTTAAATTCTTGTCAGCCCTCCAACGGAAGGTCGAATCGAAGGAGATAGTAGAGAAAGGACTCATGTTCGTAAATGCGACAATAAATTCCCAACCGAATAGGAGCACTCTGATAGATTCAGGAGCGACCCACAACTTCATCGCCGATCAAGAAGCCCGAAGATTAGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGCTGTCAACTCTGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTTAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTTATCCCAATGCCGTTGGCAAAATGCTTAGTGATCACCGATCGCAACCCCACGGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAATTGAAAAGGGGACTCGCGCGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAACAACCAACGAAGAAACTGTCCCAAATGAAATCAATGAGGTACTAAACGACTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTACCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCGGAGTTAAACCGCCAGCGAAGAACGCATACCGGATGGCTCCACCCGAGCTAGCCGAATTAAGGAAACAACTGGATGAGTTGCTGAAGGCGGGATTCATCCGCCCGGCAAAGGCACCCTACGGAGCCCCCGTACTGTTCCAGAAGAAGAAGGATGGGACGTTGCGTCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTGCGCAACAAATATCCACTGCTGATAATATCCGACTTGTTCGACCAACTTCACGGGGCCAAGTATTTCACGAAGTTGGACTTACGATCAGGGTATTACCAAGTACGTATTGCCGAAGGGGATGAGCCCAAGACGACGTGCGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAACGCTCCAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATACCTCGACGACATAGTGGTTTACAGCACAACCCTAGAAGAACACAAAGTGCACTTGAAGCTGGTGTTCGACAAGCTACGACAAAACCAACTGTATGTCAAGAAAGAGAAATGTGCATTCGCACAAACATGCATCAACTTCCTTGGACATGTCGTCAAATGTGGACATATTAGTATGGATAGCGATAAGATAAAAGCTATCCAAGAATGGAAAGTTCCTACTTCCGTATCCGATTTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCGGCCCCATTGACAGAGCTGTTGAAGAAAGACCACACTTGGTCGTGGTCAGATGATTGTCAAATGGCCTTTGAAGATCTGAAAACAACCATGATGAGGGGTCCTGTCCTCGGATTGGTAGATGTTACAAAGCCATTTGAAATAGAAACAGACGCTTCCGACTTTGCCCTAGGTGGGGTCCTTATTCAAGAAGGCCACCCCATCGCTTTCGAAAGTCGAAAGCTCAATGACGTCGAACTTAGATACACTGTCTCCGAAAAAGAAATGCTGGCAGTAGTCCATTGCCTTCGAGTCTGGAGACAATACCTCTTGGGATCACAGTTCGTAGTGAAGACGGATAACAGCGCCATTTGCCACTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGGTGGCAGGAGTCGTTAGCTGAATTCGACTTCAAGTTCGAACACAAAGCAGGGAAGAGCAATCAAGCAGCCGACGCACTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAACCGTCGTCGAACTAGCTAAAGCTGGGAAAACACGACAGTTTTGGGTTGAGGGAGACCTTCTGATGACAAAAGGAAACAGATTGTATGTCCCAAGAACGGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCCGGACACCCTGGGTGGCAAAGAACATACGCTCTAATAAAGAAAGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGTCAACAGGACAAAGTCGAGAAAGCCAAAGTCTCAGGACTCTTGGAACCTCTACCTGTGCCGACAAGACCCTGGGAAAGTGTATCTTTGGACTTCATAACACACCTCCCAAAAGTCGGGGACTATGACGCTATCTTGGTTATCGTAGACCGATTCTCAAAATATGCGACGTTCATCCCCACTCCCAAATTATGCTCGGCCGAACTCACAGCTGAACTATTTTTCAAACACATTGTAAAGTTATGGGGTATTCCGTCGAGCATCATCAGTGATCGGGATGGCAGATTCATTGGGACATTCTGGACCGAGTTATTCGCCTTCTTGGGAACAACCTTAAACATCTCCTCGAGTTACCACCCTCAAACCGATGGTCAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGATGCTCGCCAGAAGAACTGGATACAACTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACCAGCTCGTCTACGGGAAAGAGTCCCTTTGAAATTGTAAGTGGACGACAACCGGCCTTACCCCACATTATCGATCATCCTTATGCAGGGAAAAACCCTCAAGCTCACAACTTCACAAGAGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAAAAGTGGGCAGACAAGAAGCGTCGCCCCCTTCAATTCCGAGCAGGAGATCAAGTCCTCATCAAGCTGAAACCAGAACAGATCAGATTTCGCAACTGA

Coding sequence (CDS)

ATGTCGACGACAAAGTCGACACCCAAAGCACAAGTCGACCGGCTTACGCTAATAGAGGAGGAAATGCTGTTCCTCAAAGAAGTCCCTGACACCCTCCGCTTCCTGGAAGCACGGGTGACCGAATTGAGTGAGAAAGTCGTAGGAATCGACGCAATGGGCAACCGCCTGGATGGGTTGCCAATCGCAGAATTGATGTTTCGAGTGACCTCGCTCGAAGAAAGAGTTGCTCCTACGAGCAGCCCAAAACCGTCTGGTAGTCCGGATAGCTCTGTCGCGCACAAGGAGGGACGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGCTTGTTCAATGGATTAGCTGATGAGTTCAGAACAACAATCGACGACATCCAAGAAAGGATGGCCTCCATGGGCACTCGAATTGAAGTGACCATGAAAGCCGTGGAGAACGTCACGGCTGGGCAAGCTAATACAGGGTCCAACAAACTAAGATTCCTAGATCCTAGAGCCTTTAAAGGGAATCGGGACGCCAAAGAGTTGGAAAACTTCATCTTTGATGTCGAACAGTACTTCAAAGCCACAACGGCTTGTACTGACGACAAGAAGGTGACCGTAGCCTCGATGTATCTCATAGACGATGCCAAACTGTGGTGGCGTACGAAGGTGCAAGACATCGAGGATGGTTTGTGCACCATTGACTCGTGGGAGGACCTTAAGAAAGAGTTGAGGGACCAGTTCCTCCCCGAAAACGCAGGACATTTAGCAATGGAAAAACTAGTAGCCCTGAAACACACTGGAGGCATACGAGACTATGTCAGACAGTTCTCAACCCTGATGCTAGATATCAGGGGCACATCAGAGAAGGACAAGGTGTTCTTCTTTATAAATGGGTTACAGCCGTGGGCCAAAACAAAACTACACGAGAACAAGGTTCAAACCCTAGCTGACGCAATGGCCTGTGCCGAGAGACTCCTAGACTATGGGAATGAAGCGGGATCCCAAAGAAGAATAACACCAGCCCCAAACACTGGGGGCAAGCCATACAAACCACCAAGTCATCGAAATGGAAGCCCCAACAGGCCGAACGGAGGTAACGACAGACCAAGCGAATGGACGGATAGACCTCCTCAGAACAACCAAGCGGGGACATCTCGAGGACCTTACCATCAAAGGAACCACCCGACGACGCCTTTACAATGCATGTTGTGTAAAGGTCCCCACAAGGTATCTTACTGTCCTCATCGGGCCTCTCTCACTGCGCTCCAAGTGTCCATTCAAGAGAGCAATGACGCAAGGATTGAGACTATGCTTGACAAGAAGGAAGATCAAGACAATCCCCGAATGGGCGCACTTAAATTCTTGTCAGCCCTCCAACGGAAGGTCGAATCGAAGGAGATAGTAGAGAAAGGACTCATGTTCGTAAATGCGACAATAAATTCCCAACCGAATAGGAGCACTCTGATAGATTCAGGAGCGACCCACAACTTCATCGCCGATCAAGAAGCCCGAAGATTAGGACTCACTATAGGAAAGGACCCGGGAAAAATGAAAGCTGTCAACTCTGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTTAAAATAGGGGATTGGACAGGAGAGCTAGATCTTGTCGTAGCTCGCATGGACGACTTTGACGTGGTACTTGGGATGGAGTTCCTCCTAGAACACAAAGTTATCCCAATGCCGTTGGCAAAATGCTTAGTGATCACCGATCGCAACCCCACGGTAATACCTGCAAGCATCAAGCAACCAGGTAATCTTCGAATGATCTCGGCCATACAATTGAAAAGGGGACTCGCGCGAGAGGAACCTACATTTATGGCCATACCATTGATGGAAGTAACAACCAACGAAGAAACTGTCCCAAATGAAATCAATGAGGTACTAAACGACTATGCTGACATAATGCCAGAGAGCTTACCCCAAACATTACCACCTCGTCGAGGCATTGATCACGAAATCGAACTCATCCCCGGAGTTAAACCGCCAGCGAAGAACGCATACCGGATGGCTCCACCCGAGCTAGCCGAATTAAGGAAACAACTGGATGAGTTGCTGAAGGCGGGATTCATCCGCCCGGCAAAGGCACCCTACGGAGCCCCCGTACTGTTCCAGAAGAAGAAGGATGGGACGTTGCGTCTGTGCATAGACTATAGAGCCTTAAACAAGGTGACGGTGCGCAACAAATATCCACTGCTGATAATATCCGACTTGTTCGACCAACTTCACGGGGCCAAGTATTTCACGAAGTTGGACTTACGATCAGGGTATTACCAAGTACGTATTGCCGAAGGGGATGAGCCCAAGACGACGTGCGTAACAAGATATGGGGCCTTCGAATTCCTAGTAATGCCCTTTGGCTTGACAAACGCTCCAGCTACTTTCTGCACGTTGATGAACCAAGTTTTCTACGAATACTTGGATCAGTTTGTCATAGTATACCTCGACGACATAGTGGTTTACAGCACAACCCTAGAAGAACACAAAGTGCACTTGAAGCTGGTGTTCGACAAGCTACGACAAAACCAACTGTATGTCAAGAAAGAGAAATGTGCATTCGCACAAACATGCATCAACTTCCTTGGACATGTCGTCAAATGTGGACATATTAGTATGGATAGCGATAAGATAAAAGCTATCCAAGAATGGAAAGTTCCTACTTCCGTATCCGATTTGCGGTCCTTCTTAGGATTAGCCAACTACTATAGGCGGTTCGTCGAAGGGTTTTCACGACGAGCGGCCCCATTGACAGAGCTGTTGAAGAAAGACCACACTTGGTCGTGGTCAGATGATTGTCAAATGGCCTTTGAAGATCTGAAAACAACCATGATGAGGGGTCCTGTCCTCGGATTGGTAGATGTTACAAAGCCATTTGAAATAGAAACAGACGCTTCCGACTTTGCCCTAGGTGGGGTCCTTATTCAAGAAGGCCACCCCATCGCTTTCGAAAGTCGAAAGCTCAATGACGTCGAACTTAGATACACTGTCTCCGAAAAAGAAATGCTGGCAGTAGTCCATTGCCTTCGAGTCTGGAGACAATACCTCTTGGGATCACAGTTCGTAGTGAAGACGGATAACAGCGCCATTTGCCACTTCTTTGATCAACCAAAATTGACGGCAAAACAAGCCCGGTGGCAGGAGTCGTTAGCTGAATTCGACTTCAAGTTCGAACACAAAGCAGGGAAGAGCAATCAAGCAGCCGACGCACTGAGTCGGAAGGGCGAACATGCGGCCCTGTGCATGTTAGCCCATATTCACTCAAGTAAGATCGATGGATCGATGCGCGACATCATCAAGGAACATTTACATAAAGACCCATCGGCCAAAACCGTCGTCGAACTAGCTAAAGCTGGGAAAACACGACAGTTTTGGGTTGAGGGAGACCTTCTGATGACAAAAGGAAACAGATTGTATGTCCCAAGAACGGGAGAACTGAGGAAGAAGCTCATTCAGGAATGTCATGATACCTTATGGGCCGGACACCCTGGGTGGCAAAGAACATACGCTCTAATAAAGAAAGGGTACTTCTGGCCAAACATGCGAGACGACATCATGCAATACACCAAGACGTGCCTCATCTGTCAACAGGACAAAGTCGAGAAAGCCAAAGTCTCAGGACTCTTGGAACCTCTACCTGTGCCGACAAGACCCTGGGAAAGTGTATCTTTGGACTTCATAACACACCTCCCAAAAGTCGGGGACTATGACGCTATCTTGGTTATCGTAGACCGATTCTCAAAATATGCGACGTTCATCCCCACTCCCAAATTATGCTCGGCCGAACTCACAGCTGAACTATTTTTCAAACACATTGTAAAGTTATGGGGTATTCCGTCGAGCATCATCAGTGATCGGGATGGCAGATTCATTGGGACATTCTGGACCGAGTTATTCGCCTTCTTGGGAACAACCTTAAACATCTCCTCGAGTTACCACCCTCAAACCGATGGTCAGACAGAACGGTTCAATTGCTTGCTCGAAGAATACTTACGTCACTTCGTCGATGCTCGCCAGAAGAACTGGATACAACTGTTAGATGTCGCCCAATTTTGCTTCAATTGTCAAACCAGCTCGTCTACGGGAAAGAGTCCCTTTGAAATTGTAAGTGGACGACAACCGGCCTTACCCCACATTATCGATCATCCTTATGCAGGGAAAAACCCTCAAGCTCACAACTTCACAAGAGAATGGAAGCAGACAACAGATATAGCCCGGGCATATTTAGAGAAGGCTTCCAAGCATATGAAAAAGTGGGCAGACAAGAAGCGTCGCCCCCTTCAATTCCGAGCAGGAGATCAAGTCCTCATCAAGCTGAAACCAGAACAGATCAGATTTCGCAACTGA

Protein sequence

MSTTKSTPKAQVDRLTLIEEEMLFLKEVPDTLRFLEARVTELSEKVVGIDAMGNRLDGLPIAELMFRVTSLEERVAPTSSPKPSGSPDSSVAHKEGRGEEFDVLQNTMMSLFNGLADEFRTTIDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGNRDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQDIEDGLCTIDSWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGKPYKPPSHRNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQCMLCKGPHKVSYCPHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVEKGLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMAIPLMEVTTNEETVPNEINEVLNDYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKTVVELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPLQFRAGDQVLIKLKPEQIRFRN
BLAST of CmaCh00G001230 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-134
Identity = 278/838 (33.17%), Postives = 449/838 (53.58%), Query Frame = 1

Query: 630  EINEVLNDYADIMPESLPQTLP-PRRGIDHEIELIP-GVKPPAKNAYRMAPPELAELRKQ 689
            E+ ++  ++ DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373  ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 690  LDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQ 749
            +++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPL +I  L  +
Sbjct: 433  INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 750  LHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 809
            + G+  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493  IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 810  VFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFL 869
            +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+
Sbjct: 553  ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFI 612

Query: 870  GHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK 929
            G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Sbjct: 613  GYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLK 672

Query: 930  KDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEG---- 989
            KD  W W+     A E++K  ++  PVL   D +K   +ETDASD A+G VL Q+     
Sbjct: 673  KDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDK 732

Query: 990  -HPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDN-SAICHFF 1049
             +P+ + S K++  +L Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    
Sbjct: 733  YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 792

Query: 1050 DQPKLTAKQ-ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDG 1109
            ++ +   K+ ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D 
Sbjct: 793  NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET-----EPIPKDSEDN 852

Query: 1110 SMRDIIKEHLHKDPSAKTVVELAKAGK------------TRQFWVEGDLLMTKGNRLYVP 1169
            S+  + +  +  D   + V E     K                 ++  LL+   +++ +P
Sbjct: 853  SINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 912

Query: 1170 RTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVE 1229
               +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Sbjct: 913  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 972

Query: 1230 KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSA 1289
              K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +A
Sbjct: 973  NHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITA 1032

Query: 1290 ELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTE 1349
            E TA +F + ++  +G P  II+D D  F    W +        +  S  Y PQTDGQTE
Sbjct: 1033 EQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTE 1092

Query: 1350 RFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIID 1409
            R N  +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +  
Sbjct: 1093 RTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLEL 1152

Query: 1410 HPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIK 1444
              ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K
Sbjct: 1153 PSFSDKTDEN---SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

BLAST of CmaCh00G001230 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-134
Identity = 278/838 (33.17%), Postives = 449/838 (53.58%), Query Frame = 1

Query: 630  EINEVLNDYADIMPESLPQTLP-PRRGIDHEIELIP-GVKPPAKNAYRMAPPELAELRKQ 689
            E+ ++  ++ DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373  ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 690  LDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQ 749
            +++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPL +I  L  +
Sbjct: 433  INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 750  LHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 809
            + G+  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493  IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 810  VFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFL 869
            +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+
Sbjct: 553  ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFI 612

Query: 870  GHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK 929
            G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Sbjct: 613  GYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLK 672

Query: 930  KDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEG---- 989
            KD  W W+     A E++K  ++  PVL   D +K   +ETDASD A+G VL Q+     
Sbjct: 673  KDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDK 732

Query: 990  -HPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDN-SAICHFF 1049
             +P+ + S K++  +L Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    
Sbjct: 733  YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 792

Query: 1050 DQPKLTAKQ-ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDG 1109
            ++ +   K+ ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D 
Sbjct: 793  NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET-----EPIPKDSEDN 852

Query: 1110 SMRDIIKEHLHKDPSAKTVVELAKAGK------------TRQFWVEGDLLMTKGNRLYVP 1169
            S+  + +  +  D   + V E     K                 ++  LL+   +++ +P
Sbjct: 853  SINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 912

Query: 1170 RTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVE 1229
               +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Sbjct: 913  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 972

Query: 1230 KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSA 1289
              K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +A
Sbjct: 973  NHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITA 1032

Query: 1290 ELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTE 1349
            E TA +F + ++  +G P  II+D D  F    W +        +  S  Y PQTDGQTE
Sbjct: 1033 EQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTE 1092

Query: 1350 RFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIID 1409
            R N  +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +  
Sbjct: 1093 RTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLEL 1152

Query: 1410 HPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIK 1444
              ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K
Sbjct: 1153 PSFSDKTDEN---SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

BLAST of CmaCh00G001230 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-134
Identity = 278/838 (33.17%), Postives = 449/838 (53.58%), Query Frame = 1

Query: 630  EINEVLNDYADIMPESLPQTLP-PRRGIDHEIELIP-GVKPPAKNAYRMAPPELAELRKQ 689
            E+ ++  ++ DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373  ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 690  LDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQ 749
            +++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPL +I  L  +
Sbjct: 433  INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 750  LHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 809
            + G+  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493  IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 810  VFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFL 869
            +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+
Sbjct: 553  ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFI 612

Query: 870  GHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK 929
            G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Sbjct: 613  GYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLK 672

Query: 930  KDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEG---- 989
            KD  W W+     A E++K  ++  PVL   D +K   +ETDASD A+G VL Q+     
Sbjct: 673  KDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDK 732

Query: 990  -HPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDN-SAICHFF 1049
             +P+ + S K++  +L Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    
Sbjct: 733  YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 792

Query: 1050 DQPKLTAKQ-ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDG 1109
            ++ +   K+ ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D 
Sbjct: 793  NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET-----EPIPKDSEDN 852

Query: 1110 SMRDIIKEHLHKDPSAKTVVELAKAGK------------TRQFWVEGDLLMTKGNRLYVP 1169
            S+  + +  +  D   + V E     K                 ++  LL+   +++ +P
Sbjct: 853  SINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 912

Query: 1170 RTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVE 1229
               +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Sbjct: 913  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 972

Query: 1230 KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSA 1289
              K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +A
Sbjct: 973  NHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITA 1032

Query: 1290 ELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTE 1349
            E TA +F + ++  +G P  II+D D  F    W +        +  S  Y PQTDGQTE
Sbjct: 1033 EQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTE 1092

Query: 1350 RFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIID 1409
            R N  +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +  
Sbjct: 1093 RTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLEL 1152

Query: 1410 HPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIK 1444
              ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K
Sbjct: 1153 PSFSDKTDEN---SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

BLAST of CmaCh00G001230 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-134
Identity = 278/838 (33.17%), Postives = 449/838 (53.58%), Query Frame = 1

Query: 630  EINEVLNDYADIMPESLPQTLP-PRRGIDHEIELIP-GVKPPAKNAYRMAPPELAELRKQ 689
            E+ ++  ++ DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373  ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 690  LDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQ 749
            +++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPL +I  L  +
Sbjct: 433  INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 750  LHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 809
            + G+  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493  IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 810  VFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFL 869
            +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+
Sbjct: 553  ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFI 612

Query: 870  GHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK 929
            G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Sbjct: 613  GYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLK 672

Query: 930  KDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEG---- 989
            KD  W W+     A E++K  ++  PVL   D +K   +ETDASD A+G VL Q+     
Sbjct: 673  KDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDK 732

Query: 990  -HPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDN-SAICHFF 1049
             +P+ + S K++  +L Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    
Sbjct: 733  YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 792

Query: 1050 DQPKLTAKQ-ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDG 1109
            ++ +   K+ ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D 
Sbjct: 793  NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET-----EPIPKDSEDN 852

Query: 1110 SMRDIIKEHLHKDPSAKTVVELAKAGK------------TRQFWVEGDLLMTKGNRLYVP 1169
            S+  + +  +  D   + V E     K                 ++  LL+   +++ +P
Sbjct: 853  SINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 912

Query: 1170 RTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVE 1229
               +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Sbjct: 913  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 972

Query: 1230 KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSA 1289
              K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +A
Sbjct: 973  NHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITA 1032

Query: 1290 ELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTE 1349
            E TA +F + ++  +G P  II+D D  F    W +        +  S  Y PQTDGQTE
Sbjct: 1033 EQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTE 1092

Query: 1350 RFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIID 1409
            R N  +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +  
Sbjct: 1093 RTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLEL 1152

Query: 1410 HPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIK 1444
              ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K
Sbjct: 1153 PSFSDKTDEN---SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

BLAST of CmaCh00G001230 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-134
Identity = 278/838 (33.17%), Postives = 449/838 (53.58%), Query Frame = 1

Query: 630  EINEVLNDYADIMPESLPQTLP-PRRGIDHEIELIP-GVKPPAKNAYRMAPPELAELRKQ 689
            E+ ++  ++ DI  E+  + LP P +G++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373  ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 690  LDELLKAGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQ 749
            +++ LK+G IR +KA    PV+F  KK+GTLR+ +DY+ LNK    N YPL +I  L  +
Sbjct: 433  INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 750  LHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 809
            + G+  FTKLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493  IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 810  VFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFL 869
            +  E  +  V+ Y+DDI+++S +  EH  H+K V  KL+   L + + KC F Q+ + F+
Sbjct: 553  ILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFI 612

Query: 870  GHVVKCGHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLK 929
            G+ +     +   + I  + +WK P +  +LR FLG  NY R+F+   S+   PL  LLK
Sbjct: 613  GYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLK 672

Query: 930  KDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEG---- 989
            KD  W W+     A E++K  ++  PVL   D +K   +ETDASD A+G VL Q+     
Sbjct: 673  KDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDK 732

Query: 990  -HPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQYLLGS--QFVVKTDN-SAICHFF 1049
             +P+ + S K++  +L Y+VS+KEMLA++  L+ WR YL  +   F + TD+ + I    
Sbjct: 733  YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 792

Query: 1050 DQPKLTAKQ-ARWQESLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDG 1109
            ++ +   K+ ARWQ  L +F+F+  ++ G +N  ADALSR  +         I     D 
Sbjct: 793  NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDET-----EPIPKDSEDN 852

Query: 1110 SMRDIIKEHLHKDPSAKTVVELAKAGK------------TRQFWVEGDLLMTKGNRLYVP 1169
            S+  + +  +  D   + V E     K                 ++  LL+   +++ +P
Sbjct: 853  SINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLP 912

Query: 1170 RTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLICQQDKVE 1229
               +L + +I++ H+     HPG +    +I + + W  +R  I +Y + C  CQ +K  
Sbjct: 913  NDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSR 972

Query: 1230 KAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIPTPKLCSA 1289
              K  G L+P+P   RPWES+S+DFIT LP+   Y+A+ V+VDRFSK A  +P  K  +A
Sbjct: 973  NHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITA 1032

Query: 1290 ELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHPQTDGQTE 1349
            E TA +F + ++  +G P  II+D D  F    W +        +  S  Y PQTDGQTE
Sbjct: 1033 EQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTE 1092

Query: 1350 RFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQPALPHIID 1409
            R N  +E+ LR         W+  + + Q  +N    S+T  +PFEIV    PAL  +  
Sbjct: 1093 RTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLEL 1152

Query: 1410 HPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPL-QFRAGDQVLIK 1444
              ++ K  +    ++E  Q     + +L   +  MKK+ D K + + +F+ GD V++K
Sbjct: 1153 PSFSDKTDEN---SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK 1201

BLAST of CmaCh00G001230 vs. TrEMBL
Match: A5BX03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1)

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 714/1357 (52.62%), Postives = 927/1357 (68.31%), Query Frame = 1

Query: 112  FNGLADEFRTTIDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLD--PRA--- 171
            F    D+  T    ++ RM ++  R++V  + +    A      S ++      PR    
Sbjct: 96   FMSFQDKVMTMFASVESRMEALAARMDVRDQEIRQELAIYKTAVSARVMATHEAPRVEVP 155

Query: 172  ----FKGNRDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQDIE 231
                F G RDAKEL+NF++ +E+YF+A     +  KV  A++YL D+A LWWR +  DIE
Sbjct: 156  KLHTFSGKRDAKELDNFLWHMERYFEAIALTDEATKVRTATLYLTDNATLWWRRRFADIE 215

Query: 232  DGLCTIDSWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTS 291
             G CTID+W+  K+E++ QF PE+  +LA + L  LKHTG IR+YV++FSTLML+I   +
Sbjct: 216  RGTCTIDTWDAFKREIKRQFYPEDVAYLARKNLKRLKHTGSIREYVKEFSTLMLEIPNMA 275

Query: 292  EKDKVFFFINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGK 351
            E++ +F F++ LQ WA+ +L    VQ LA AMA AE L+DY     S            K
Sbjct: 276  EEELLFNFMDNLQSWAEQELRRRGVQDLATAMAVAESLVDYRKGDSS------------K 335

Query: 352  PYKPPSHRNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPY-------HQRNHPTTPLQ 411
            P KPPS      N+  GG D+ S+         + G+S+GP         +R   T    
Sbjct: 336  P-KPPS----KGNQAKGGGDKRSQG-----HTPKEGSSKGPSGKDGKGKDKRKEFTPRTN 395

Query: 412  CMLCKGPHKVSYCPHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQR 471
            C LC GPH    CP R +L A               M+++K  + + +MG+L  L AL+ 
Sbjct: 396  CFLCDGPHXARDCPKRKALNA---------------MIEEKXQEGDAKMGSLXLLXALKA 455

Query: 472  KVESKEIVEKGLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAV 531
            K   K    K LM+V   +N +  ++ L+D+GATHNF+++ EARRL L   K+ G +KAV
Sbjct: 456  KXMPKTPQSKXLMYVETLVNGKATKA-LVDTGATHNFVSEDEARRLELQASKEGGWLKAV 515

Query: 532  NSEALPIVGVSKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCL-V 591
            NS A P  GV++ V   IG W G +D  VA MDDF +VLGM+FL + K +P+P  + + +
Sbjct: 516  NSAAKPSHGVARGVTMHIGLWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAI 575

Query: 592  ITDRNPTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMAIPLMEVTTNE-ETVPNEINE 651
            + +  P ++P   +      M+SA+Q+K+GL REE T++A    E      E +P EI  
Sbjct: 576  LEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMPKEIKG 635

Query: 652  VLNDYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLK 711
            VL+++ D+M   LP+ L PRR  +H+I+L  G KP A   YRMAPPEL ELR+QL ELL 
Sbjct: 636  VLDEFKDVMXPELPKRLXPRREEBHKIKLEXGAKPRAMGPYRMAPPELEELRRQLKELLD 695

Query: 712  AGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKY 771
            AGFI+P+KAPYGAPVLFQKK DG+LR+CIDYRALNKVTV+NKYP+ +I+DLFDQL  A+Y
Sbjct: 696  AGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLGRARY 755

Query: 772  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYL 831
            FTKLDLRSGYYQVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNAPATFCTLMN++F+ YL
Sbjct: 756  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTLMNKIFHPYL 815

Query: 832  DQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKC 891
            D+FV+ YLDDIV+YS TL+EH+ HL+ VF  LRQN+LYVKKEKC+FA+  +NFLGH ++ 
Sbjct: 816  DKFVVXYLDDIVIYSNTLKEHEEHLRKVFKILRQNKLYVKKEKCSFAKEEVNFLGHRIRD 875

Query: 892  GHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWS 951
            G + MD  K+KAIQEW  PT V  LRSFLGL NYYRRF++G+S RAAPLT+LLKK+  W 
Sbjct: 876  GKLMMDDSKVKAIQEWDPPTKVPQLRSFLGLVNYYRRFIKGYSGRAAPLTDLLKKNKAWE 935

Query: 952  WSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKL 1011
            W   CQ AFEDLK  +   PVL L D TK FE+ TDASDFA+GGVL+QE HPIAFESRKL
Sbjct: 936  WDGRCQQAFEDLKKAVTEEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKL 995

Query: 1012 NDVELRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQE 1071
            N+ E RYTV EKEM A+VHCLR WR YLLGS F+VKTDN A  +F  Q KL+ KQARWQ+
Sbjct: 996  NNAERRYTVQEKEMTAIVHCLRTWRHYLLGSHFIVKTDNVATSYFQTQKKLSPKQARWQD 1055

Query: 1072 SLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPS 1131
             LAEFD+  E+K G +N  ADALSRK E A++       SS+  G +  +++E L  DP 
Sbjct: 1056 FLAEFDYTLEYKPGSANHVADALSRKAELASI-------SSQPQGDIMYLLREGLQHDPV 1115

Query: 1132 AKTVVELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRT 1191
            AK+++ LA  GKT++FWVE  LL TKG RLYVP+ G +R+ LI+ECHDT WAGHPG +RT
Sbjct: 1116 AKSLIALAHEGKTKRFWVEDGLLYTKGRRLYVPKWGNIRRNLIKECHDTKWAGHPGQRRT 1175

Query: 1192 YALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFIT 1251
             AL++  Y+WP +RD++  Y +TCL+CQQDKVE+ +  GLLEPLPV  RPW+SV++DFI 
Sbjct: 1176 RALLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPVAERPWDSVTMDFII 1235

Query: 1252 HLPKVGDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDG 1311
             LPK  D  +I+V+VDRFSKYATFI  P  C+AE TA LF KH+VK WG+P  IISDRD 
Sbjct: 1236 GLPKSEDSGSIIVVVDRFSKYATFIAAPTDCTAEETARLFLKHVVKYWGLPKFIISDRDP 1295

Query: 1312 RFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDV 1371
            RF G FWTELF  +G+ L+ S+S+HPQTDGQTER N LLE YLRHFV A Q++W +LLD+
Sbjct: 1296 RFTGKFWTELFKLMGSELHFSTSFHPQTDGQTERXNALLELYLRHFVSANQRDWAKLLDI 1355

Query: 1372 AQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAY 1431
            AQF +N Q S +T KSPFE+ +G+QP  PH +   Y G++P A  F + W +  DIA +Y
Sbjct: 1356 AQFSYNLQRSEATNKSPFELATGQQPLTPHTLXIGYTGRSPAAFKFAKGWHEQADIAXSY 1407

Query: 1432 LEKASKHMKKWADKKRRPLQFRAGDQVLIKLKPEQIR 1451
            L+KA+K MKKWADKKRR  +++ GD VL+KL P+Q +
Sbjct: 1416 LDKAAKKMKKWADKKRRHTEYKVGDMVLVKLLPQQFK 1407

BLAST of CmaCh00G001230 vs. TrEMBL
Match: A5AUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1)

HSP 1 Score: 1307.0 bits (3381), Expect = 0.0e+00
Identity = 692/1409 (49.11%), Postives = 922/1409 (65.44%), Query Frame = 1

Query: 58   GLPIAELMFRVTSLEERVAPTSSPKPSGSPDSSVAHKEGRGEEFDVLQNTMMSLFNGLAD 117
            G  +  L  R+T LEE +     P+  G+  S   +  G   E  + +N + S  N + +
Sbjct: 4    GSAMEALRERMTQLEEALGEW--PRDDGTVASWAENTMG---EIQLQRNMLESHDNFVEE 63

Query: 118  ---EFRTT----IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGN 177
               EF+T     ID+ +  + + G  I V  KAV   +A      S K+R  +P+ F GN
Sbjct: 64   KMAEFKTEMQSRIDEFKXTLQTYGEDIAVLKKAVLQGSASGPEAPS-KVRVPEPKGFNGN 123

Query: 178  RDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQD-IEDGLCTID 237
             +AK LENF++D+EQ+FKA     D +KV++ SMYL  DAKLWWRT+++D  E G   I 
Sbjct: 124  XNAKXLENFLWDIEQFFKAAHV-PDGEKVSITSMYLTGDAKLWWRTRMEDDAESGRPQIT 183

Query: 238  SWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFF 297
            +WE LKKEL+DQFLP N   +A E L  L+HTG +R+YV++FS+LMLDI+  SE+DK+F 
Sbjct: 184  TWETLKKELKDQFLPTNTAWVAREALKRLRHTGSVREYVKEFSSLMLDIKNMSEEDKLFN 243

Query: 298  FINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGKPYKPPSH 357
            F++GLQ WA+T+L    V+ L  AM  A+ L+D   + G     T  P + G        
Sbjct: 244  FMSGLQGWAQTELRRQGVRDLPAAMXAADCLVD--XKMGGASSTTQRPKSEG-------- 303

Query: 358  RNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQR----NHPTTPLQCMLCKGPHKV 417
              G   +  G   + S W     Q  +      P  +        T  + C +C GPH+ 
Sbjct: 304  --GKKAKFEGKTSQKSGW---KKQGKKPAVGGKPVEKTTKVVQQTTRMMGCFICNGPHRA 363

Query: 418  SYCPHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVEK 477
              CP R  L+AL V+ ++  D+  ET          PR+  L+ L+A             
Sbjct: 364  KDCPKREKLSAL-VTXEDKGDSDPET---------PPRVNPLQLLNA------------- 423

Query: 478  GLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGV 537
                             L+DSGATHNF+A +EA RLGL + +D  ++KAVNS+A  I GV
Sbjct: 424  -----------------LVDSGATHNFVATKEAARLGLRLEEDTSRIKAVNSKAQKIQGV 483

Query: 538  SKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMP-LAKCLVITDRNPTVIP 597
            +K VP KIGDW G   L+   +DDFD++LG++FLL  KV  +P L   +V+ ++ P  + 
Sbjct: 484  AKNVPMKIGDWEGMCSLLCVPLDDFDLILGVDFLLRAKVALIPHLGGLMVLEEKQPCFVQ 543

Query: 598  ASIKQPGNL---RMISAIQLKRGLAREEPTFMA--IPLMEVTTNEETVPNEINEVLNDYA 657
            A   + G      M+SAIQLK+GL R + T++A  I + E  T E  VP+ + ++L +++
Sbjct: 544  ALRAKDGGKGQPEMLSAIQLKKGLKRGQETYVAALIEIKEGQTME--VPDSVVKILKEFS 603

Query: 658  DIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRP 717
            D+MP  LP+ LPPRR IDH+IEL+PG K PA+  YRM+P EL ELRKQL ELL AG I+P
Sbjct: 604  DVMPAELPKELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQP 663

Query: 718  AKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDL 777
            ++APYGAPVLFQKK DG+LR+C+DYRALNKVT++NKYP+ + ++LFD+L  A YFTKLDL
Sbjct: 664  SRAPYGAPVLFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDL 723

Query: 778  RSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIV 837
            RSGY+QVR+A GDE KTTCV RYG++EFLVMPFGLTNAPATFC LMN V ++YLD FV+V
Sbjct: 724  RSGYWQVRVAAGDEGKTTCVXRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDXFVVV 783

Query: 838  YLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMD 897
            YLDDIVVYS TL EH+ HL+LVF +LR+N+LYVK EKC FAQ  I FLGH +  G I MD
Sbjct: 784  YLDDIVVYSKTLTEHEKHLRLVFQRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMD 843

Query: 898  SDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQ 957
              K++AI EW VP+ V++LRSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS  CQ
Sbjct: 844  KGKVQAIMEWTVPSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQ 903

Query: 958  MAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELR 1017
            MAFE LK  M   P L L D+   FE++TDAS+ ALGGVL+QEGHP+AFESRKLN+ E R
Sbjct: 904  MAFESLKEAMSTEPXLRLPDLDLXFEVQTDASBRALGGVLVQEGHPVAFESRKLNNAEQR 963

Query: 1018 YTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFD 1077
            Y+  EKEM AVVHCLR WR YLLGS F V TDN A   F  Q KL+ +QARWQE LA+F+
Sbjct: 964  YSTHEKEMTAVVHCLRQWRHYLLGSIFTVVTDNVANTFFKTQKKLSPRQARWQEFLADFN 1023

Query: 1078 FKFEHKAGKSNQAADALSRKGEHAALCMLAHIHS-SKIDGSMRDIIKEHLHKDPSAKTVV 1137
            F++ H+ G+ N  AD LSRK       ++ +I + S++     + IK    +D +   + 
Sbjct: 1024 FEWLHRPGRHNTVADVLSRKE------LITYITALSEVISDFNEKIKHAAEQDAAYGRLR 1083

Query: 1138 ELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIK 1197
            +  K G  R++W+EGDLL+ KG R YVP  G LRK+L++E HD  WAGHPG +RT AL+ 
Sbjct: 1084 QQVKEGVIRRYWLEGDLLVAKGGRWYVP-AGGLRKELLRETHDAKWAGHPGEERTLALLA 1143

Query: 1198 KGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV 1257
            + Y+WP M +++  Y KTCL+CQ DK E+ K +GLL+PLP+P +PWES+S+DFI+  PKV
Sbjct: 1144 RSYYWPKMGEEVQAYVKTCLVCQMDKTERKKAAGLLQPLPIPEKPWESISMDFISGFPKV 1203

Query: 1258 GDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGT 1317
             D+ ++ V+VDRFSKYA FIP P  C AE  A+LFF ++VK +G+P  I+SDRD RF G 
Sbjct: 1204 RDFKSVFVVVDRFSKYAVFIPAPDTCXAEEAAKLFFSNVVKHFGLPRDIVSDRDARFTGK 1263

Query: 1318 FWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCF 1377
            FW ELF  LG+ L  S++ HPQTDGQTER N LLEEYLRH+V A QKNW+ L+D AQ C+
Sbjct: 1264 FWVELFKLLGSELKFSTANHPQTDGQTERINALLEEYLRHYVTATQKNWVDLMDTAQLCY 1323

Query: 1378 NCQTSSSTGKSPFEIVSGRQPALP-HIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKA 1437
            N Q SS+TG SPFE+  G QP +P  +      G +P A+   +  ++  D AR  LEKA
Sbjct: 1324 NLQRSSATGMSPFELAIGVQPXMPLXVAKQKVGGNSPAAYKMAQSRQEMLDEARDSLEKA 1341

Query: 1438 SKHMKKWADKKRRPLQFRAGDQVLIKLKP 1447
            ++ MKK+AD+ RR L+F+ GD+VL+KL P
Sbjct: 1384 ARRMKKYADRDRRSLEFQVGDRVLLKLTP 1341

BLAST of CmaCh00G001230 vs. TrEMBL
Match: Q9ZS84_SOLLC (Polyprotein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 1243.8 bits (3217), Expect = 0.0e+00
Identity = 650/1355 (47.97%), Postives = 887/1355 (65.46%), Query Frame = 1

Query: 118  EFRTT----IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGNRDA 177
            +FR T    ++ +Q+   ++   + V  +AV   T       S+K++  DP+AF G R A
Sbjct: 67   DFRATTTQKLEGLQKENENLRAELVVLCRAV--ATLSSTRVESSKVKIPDPKAFSGARSA 126

Query: 178  KELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTK-VQDIEDGLCTIDSWE 237
            KELENFI+D+EQYF A     D  K+ + +MYL  DAKLWWRT+   D+  G   ID+W+
Sbjct: 127  KELENFIWDMEQYFTAARV-PDADKLNITTMYLSGDAKLWWRTRNADDVSAGRPRIDTWD 186

Query: 238  DLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFIN 297
             L KE+RDQFLP NA  LA +KL  L+ TG +R+Y+++F+++MLDI+  S++DK+  FI+
Sbjct: 187  KLIKEMRDQFLPSNASWLARDKLKRLRQTGSVREYIKEFTSVMLDIQNMSDEDKLHNFIS 246

Query: 298  GLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTG---GKPYKPPSH 357
            G+Q WA+ +L    V+ L  A+A A+ L+D+     + R  T  P+T     K  K    
Sbjct: 247  GMQGWAQNELRRQNVKDLPGAIAAADSLVDF----RTTRPSTDVPSTSKNKKKNEKKGEW 306

Query: 358  RNGS--PNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQCMLCKGPHKVSY 417
            R  S   N  + G  +  +  DRP   ++ G S+G             C  C GPH    
Sbjct: 307  RKDSRKENANDKGKAQMKDGKDRP--KSKDGNSKG-------------CWTCGGPHLAKS 366

Query: 418  CPHRASLTAL---QVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVE 477
            CP+R  + AL    V+ +E ++  +  M +      N  MG         R++ S     
Sbjct: 367  CPNREKVNALLAGNVNQREEDEEIVAAMANPLGLSFNHIMGINNV-----REISSTSNPH 426

Query: 478  KGLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVG 537
              L+ +   +  Q   + ++D+GATH F+  + A +LGL + K P  +K VN++A  IVG
Sbjct: 427  ASLIHIEMKVKEQCVMA-MVDTGATHTFVDVKIATKLGLKLSKSPSYVKTVNAKAQAIVG 486

Query: 538  VSKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIP 597
            ++  V    G+W G+ +L+V  + DF+++LG++FL +++ +P P    +++   +     
Sbjct: 487  MAYSVSMSTGNWVGKHNLMVMPLGDFEIILGIDFLRKYQFVPFPHLDGVMVMSGSDAGFL 546

Query: 598  ASIKQPGNLR----------MISAIQLKRGLAREEPTFMAIPLMEVTTN-EETVPNEINE 657
              +   GN+           ++SA+ + +GL + + T +A  L+E+  + +  VP+ + E
Sbjct: 547  KGVHPFGNINKVAKKKDKEMLLSAMSIDKGLKKGDETILA-ALVEIKPDVKMEVPDCVAE 606

Query: 658  VLNDYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLK 717
            +L  YAD+MP  LP+ LPPRR IDH+IEL+PG   PA+  YRMAP EL ELRKQL+ELL 
Sbjct: 607  LLKQYADVMPPELPKKLPPRRDIDHKIELLPGTVAPAQAPYRMAPKELVELRKQLNELLD 666

Query: 718  AGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKY 777
            AG I+P+KAPYGAPVLFQKK+DGT+R+C+DYRALNK T++NKY + ++ DL D+L  A +
Sbjct: 667  AGLIQPSKAPYGAPVLFQKKQDGTMRMCVDYRALNKATIKNKYSVPLVQDLMDRLSKACW 726

Query: 778  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYL 837
            FTKLDLR+GY+QVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNAPATFC LMN V ++YL
Sbjct: 727  FTKLDLRAGYWQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNNVLFDYL 786

Query: 838  DQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKC 897
            D FV+VYLDDIV+YS TLEEH  HL LV  +LR+  LYVK EKC FAQ  I FLGH+V  
Sbjct: 787  DDFVVVYLDDIVIYSRTLEEHVNHLSLVLSQLRKYTLYVKMEKCEFAQQEIKFLGHLVSK 846

Query: 898  GHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWS 957
              + MD  K++AI +W+ P  V DLRSFLGLANYYR+F+ G+S++AA LT+LLKKD  W 
Sbjct: 847  NQVRMDPKKVQAIVDWQAPRHVKDLRSFLGLANYYRKFIAGYSKKAASLTDLLKKDAKWV 906

Query: 958  WSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKL 1017
            WS+ C+ AF++LK  +   P+L L D   PFE+ TDASD A+GGVL+QEGHP+AFESRKL
Sbjct: 907  WSEQCEKAFQNLKNAIASEPILKLPDFELPFEVHTDASDKAIGGVLVQEGHPVAFESRKL 966

Query: 1018 NDVELRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQE 1077
            ND E RY+  EKEM+AVVHCL+VWR YLLG++FVV+TDN A   F  Q KL+ KQARWQE
Sbjct: 967  NDAEQRYSTHEKEMVAVVHCLQVWRVYLLGTRFVVRTDNVANTFFKTQKKLSPKQARWQE 1026

Query: 1078 SLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPS 1137
             LAE+DF +EHK GK NQ ADALSRK    A+  +     SK++    D I+     D  
Sbjct: 1027 FLAEYDFMWEHKPGKHNQVADALSRKEVFVAVYSI-----SKLETDFYDRIRLCAANDSL 1086

Query: 1138 AKTVVELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRT 1197
                +   + G  R++W+E DLL  KG R+ VP  G LRK L++E +D+ WAGHPG +R 
Sbjct: 1087 YVKWMGQVQDGTMRRYWIEDDLLYFKGGRIVVPNQGGLRKDLMKEAYDSAWAGHPGVERM 1146

Query: 1198 YALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFIT 1257
             AL+ + YFWP M DDI  Y KTC +CQ DK E+ K +GLL+PLP+P RPW SVS+DFI+
Sbjct: 1147 LALLSRVYFWPKMEDDIEAYVKTCHVCQVDKTERKKEAGLLQPLPIPERPWLSVSMDFIS 1206

Query: 1258 HLPKVGDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDG 1317
              PKV    +I+V+VDRFSKY+ FI  P+LCS+E+ AELF+KH++K +G+P+ I+SDRD 
Sbjct: 1207 GFPKVDGKASIMVVVDRFSKYSVFIAAPELCSSEVAAELFYKHVIKYFGVPADIVSDRDT 1266

Query: 1318 RFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDV 1377
            RF G FWT LF  +GT L  S++ HPQTDGQTER N LLEEYLRH+V A Q+NW++LLD 
Sbjct: 1267 RFTGRFWTALFNMMGTELKFSTANHPQTDGQTERINHLLEEYLRHYVTASQRNWVELLDT 1326

Query: 1378 AQFCFNCQTSSSTGKSPFEIVSGRQPALP-HIIDHPYAGKNPQAHNFTREWKQTTDIARA 1437
            AQFC+N   SS+T  SPFEIV G+QP  P  +      GK P A+   R+  +    A+ 
Sbjct: 1327 AQFCYNLHKSSATEMSPFEIVLGKQPMTPLDVAKSKNQGKCPAAYRVARDRLEMLSEAQD 1386

Query: 1438 YLEKASKHMKKWADKKRRPLQFRAGDQVLIKLKPE 1448
             L KA + MKK+AD+ RR ++F  GD+VL+KL P+
Sbjct: 1387 SLRKAQQRMKKYADQHRRSVEFSVGDKVLLKLTPQ 1387

BLAST of CmaCh00G001230 vs. TrEMBL
Match: A5AXU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031913 PE=4 SV=1)

HSP 1 Score: 1230.7 bits (3183), Expect = 0.0e+00
Identity = 666/1402 (47.50%), Postives = 889/1402 (63.41%), Query Frame = 1

Query: 58   GLPIAELMFRVTSLEERVAPTSSPKPSGSPDSSVAHKEGRGEEFDVLQNTMMSLFNGLAD 117
            G  +  L  R+T LEE +     P+  G+  S   +  G   E  + +N + S  N + +
Sbjct: 4    GSAMEALRERMTQLEEALGEW--PRDDGTVXSWAENTMG---EIQLQRNMLESHDNFVEE 63

Query: 118  ---EFRTT----IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGN 177
               EF+T     ID+ +  + + G  I V  KAV   +A      S K+R  +P+ F GN
Sbjct: 64   KMAEFKTEMQSRIDEFKVTLQTYGEDIAVLKKAVLQGSASGPEAPS-KVRVXEPKGFNGN 123

Query: 178  RDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQD-IEDGLCTID 237
            R+AKELENF++D+EQ+FKA     D +KV++ SMYL  DAKLWWRT+++D  E G   I 
Sbjct: 124  RNAKELENFLWDIEQFFKAAHV-PDGEKVSITSMYLTGDAKLWWRTRMEDDAEFGRPQIT 183

Query: 238  SWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFF 297
            +WE LKKEL+DQFLP N   +A E L  L+HTG +R+YV++FS+LMLDI+  SE+DK+F 
Sbjct: 184  TWETLKKELKDQFLPTNTAWVAREALKRLRHTGSVREYVKEFSSLMLDIKNMSEEDKLFN 243

Query: 298  FINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGKPYKPPSH 357
            F++GLQ WA+T+L    V+ L  AM+ A+ L+DY  + G     T  P + G        
Sbjct: 244  FMSGLQGWAQTELRRQGVRDLPAAMSAADCLMDY--KMGGASSTTQRPKSEG-------- 303

Query: 358  RNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQ-CMLCKGPHKVSYC 417
              G   +  G   + S W  +  +    G       +    TT +  C +C GPH+   C
Sbjct: 304  --GKKAKFEGKTSQKSGWKKQGKKPAVGGKPVEKTTKVVQQTTRMMGCFICNGPHRAKDC 363

Query: 418  PHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVEKGLM 477
            P R  L+AL V+ ++  D+  ET          PR+  L+ L+     +  +  V+K LM
Sbjct: 364  PKREKLSAL-VTAEDKGDSDPETP---------PRVNPLQLLNV----IHGETXVQKSLM 423

Query: 478  FVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKR 537
             ++A +N    ++ L+DSGATHNF+A +EA                             R
Sbjct: 424  HIHAIVNGVKVKA-LVDSGATHNFVATKEA----------------------------AR 483

Query: 538  VPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIK 597
            +  ++ + T  +  V ++      V         K +PM +       D           
Sbjct: 484  LGLRLEEDTSRIKAVNSKAQKIQGVA--------KNVPMKIGDWEGQKDGGK-------- 543

Query: 598  QPGNLRMISAIQLKRGLAREEPTFMA--IPLMEVTTNEETVPNEINEVLNDYADIMPESL 657
              G   M+SAIQLK+GL R + T++A  I + E  T E  VP+ + ++L ++ D+MP  L
Sbjct: 544  --GQPEMLSAIQLKKGLKRGQETYVAALIXIKEGQTME--VPDSVVKILKEFXDVMPAEL 603

Query: 658  PQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGA 717
            P+ LPPRR IDH+IEL+PG K PA+  YRM+P EL ELRKQL ELL AG I+P++APYGA
Sbjct: 604  PKELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQPSRAPYGA 663

Query: 718  PVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDLRSGYYQV 777
            PV+FQKK DG+LR+C+DYRALNKVT++NKYP+ + ++LFD+L  A YFTKLDLRSGY+QV
Sbjct: 664  PVIFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDLRSGYWQV 723

Query: 778  RIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVV 837
            R+  GDE KTTCVTRYG++EFLVMPFGLTNAPATFC LMN V ++YLD FV+VYLDDIVV
Sbjct: 724  RVXAGDEGKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDAFVVVYLDDIVV 783

Query: 838  YSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMDSDKIKAI 897
            YS TL EH+ HL+LVF +LR+N+LYVK EKC FAQ  I FLGH +  G I MD  K++AI
Sbjct: 784  YSKTLTEHEKHLRLVFQRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMDKGKVQAI 843

Query: 898  QEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLK 957
             EW V + V++LRSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS  CQMAFE LK
Sbjct: 844  MEWTVXSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQMAFESLK 903

Query: 958  TTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELRYTVSEKE 1017
              M   PVL L D+  PFE +TDASD ALGGVL+QEGHP+AFESRKLN+ E RY+  EKE
Sbjct: 904  EAMSTEPVLRLPDLDLPFEXQTDASDRALGGVLVQEGHPVAFESRKLNNAEQRYSTHEKE 963

Query: 1018 MLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKA 1077
            M AVVHCLR WR YLLGS F V TDN     F  Q KL+ +QA WQE LA+F+F++ H+ 
Sbjct: 964  MTAVVHCLRQWRHYLLGSIFTVVTDNVXNTFFKTQKKLSXRQAXWQEFLADFNFEWLHRP 1023

Query: 1078 GKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKTVVELAKAGKT 1137
            G+ N  AD LSRK     +  L  + S        + IK    +D +   + +  K G  
Sbjct: 1024 GRHNTVADVLSRKELITYITALXEVIS-----DFNEKIKHAAEQDAAYGRLRQQVKEGVI 1083

Query: 1138 RQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNM 1197
            R++W+EGDLL+ KG R YVP  G LRK+L++E HD  WAGHPG +RT AL+ + Y+WP M
Sbjct: 1084 RRYWLEGDLLVAKGGRWYVP-AGGLRKELLRETHDAKWAGHPGEERTLALLARSYYWPKM 1143

Query: 1198 RDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILV 1257
             +++  Y KTCL+CQ DK E+ K +GLL+PL +P +PWES+S+DFI+  PKV D+ ++ V
Sbjct: 1144 GEEVQAYVKTCLVCQMDKTERKKAAGLLQPLSIPEKPWESISMDFISGFPKVRDFKSVFV 1203

Query: 1258 IVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAF 1317
            +VDRFSKYA FIP P  C AE   +LFF ++VK +G+P  IISDRD RF G FW ELF  
Sbjct: 1204 VVDRFSKYAVFIPAPDTCPAEEATKLFFSNVVKHFGLPRDIISDRDARFTGKFWVELFKL 1263

Query: 1318 LGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSST 1377
            LG+ L  S++ HPQTDGQTER N LLEEYLRH+V A QKNW+ L+D AQ C+N Q SS+T
Sbjct: 1264 LGSELKFSTANHPQTDGQTERINALLEEYLRHYVTATQKNWVDLMDTAQLCYNLQRSSAT 1317

Query: 1378 GKSPFEIVSGRQPALP-HIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWA 1437
            G SPFE+  G QP +P  +      G +P A+   +  ++  D AR  LEKA + MKK+A
Sbjct: 1324 GMSPFELAIGVQPRMPLEVAKQKVGGNSPAAYKMXQSRQEMLDEARDSLEKAXRRMKKYA 1317

Query: 1438 DKKRRPLQFRAGDQVLIKLKPE 1448
            D+ RR L+F+ GD+VL+KL P+
Sbjct: 1384 DRDRRSLEFQVGDRVLLKLTPQ 1317

BLAST of CmaCh00G001230 vs. TrEMBL
Match: A5B4X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1)

HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 621/1162 (53.44%), Postives = 798/1162 (68.67%), Query Frame = 1

Query: 298  AKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGKPYKPPSHRNGSPNRP 357
            A+ +L    VQ LA  MA AE L+DY     S            KP KPPS      N+ 
Sbjct: 212  AEQELRRRGVQDLATVMAVAESLVDYRRGDSS------------KP-KPPS----KGNQA 271

Query: 358  NGGNDRPSEWTDRPPQNNQAGTSRGPY-------HQRNHPTTPLQCMLCKGPHKVSYCPH 417
             GG D+ S+         + G+S+GP         +R   T    C LC GPH    CP 
Sbjct: 272  KGGGDKRSQG-----HTPKEGSSKGPSGKDGKGKDKRKEFTPRTNCFLCDGPHWARDCPK 331

Query: 418  RASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVEKGLMFV 477
            R +L A               M+++KE + + +MG+L+ L+AL+ K   K    KGLM+V
Sbjct: 332  RKALNA---------------MIEEKEQEGDAKMGSLQLLNALKAKPMPKMPQSKGLMYV 391

Query: 478  NATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKRVP 537
             A +N +  ++ L+D+GATHNF++  EARRL L   K+ G +KAVNS A P  GV++ V 
Sbjct: 392  EALVNGKATKA-LVDTGATHNFVSKDEARRLELQASKEGGWLKAVNSAAKPSHGVAREVT 451

Query: 538  FKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCL-VITDRNPTVIPASIKQ 597
              IG W G +D  VA MDDF +VLGM+FL +   +P+P  + + ++ +  P ++P   + 
Sbjct: 452  MHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVXAVPLPFLRSMAILEEEKPCMVPTVTEG 511

Query: 598  PGNLRMISAIQLKRGLAREEPTFMAIPLMEVTTNE-ETVPNEINEVLNDYADIMPESLPQ 657
                 M+SA+Q+K+GL REE T++A    E      E +  EI  VL+++ D+MP  LP+
Sbjct: 512  TPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMLKEIKRVLDEFKDVMPPELPK 571

Query: 658  TLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAPV 717
             LPPRR  DH+IEL  G KPPA   YRMAPPEL ELR+QL ELL AGFI+P+KAPYGAPV
Sbjct: 572  RLPPRREEDHKIELELGAKPPAMGPYRMAPPELEELRRQLKELLDAGFIQPSKAPYGAPV 631

Query: 718  LFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDLRSGYYQVRI 777
            LFQKK DG+L++CIDYRALNKVTV+NKYP+ +I+DLFDQL  A+YFTKLDLRSGYYQVRI
Sbjct: 632  LFQKKHDGSLQMCIDYRALNKVTVKNKYPIPLIADLFDQLGRARYFTKLDLRSGYYQVRI 691

Query: 778  AEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYS 837
            AEGDEPKTTCVTRYG++EFLVM FGLTNAPATFCTLMN++F+ YLD+FV+VYLDDIV+YS
Sbjct: 692  AEGDEPKTTCVTRYGSYEFLVMSFGLTNAPATFCTLMNKIFHPYLDKFVVVYLDDIVIYS 751

Query: 838  TTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMDSDKIKAIQE 897
             TL+EH              +   +KEKC FA+  ++FLGH ++ G + MD  K+KAIQE
Sbjct: 752  NTLKEHA------------ERAIREKEKCLFAKEEVSFLGHRIRDGKLMMDDSKVKAIQE 811

Query: 898  WKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLKTT 957
            W  PT V  LRSFLGL NYY RF++G+S +AAPLT+LLKK+    W + CQ AFEDLK  
Sbjct: 812  WDPPTKVPQLRSFLGLVNYYXRFIKGYSAKAAPLTDLLKKNKAXEWYERCQQAFEDLKKA 871

Query: 958  MMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELRYTVSEKEML 1017
            +   PVL L D TK FE+ TDASDFA+GGVL+QE HPIAFESRKLNDVE RYTV EKEM 
Sbjct: 872  VTEEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKLNDVERRYTVQEKEMT 931

Query: 1018 AVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGK 1077
            A+VHCLR WR YLLGS F+VKT+N A  +F  Q KL+ KQARWQ+ LAEFD+  E+K G 
Sbjct: 932  AIVHCLRTWRHYLLGSHFIVKTNNVATSYFQTQKKLSPKQARWQDFLAEFDYTLEYKPGS 991

Query: 1078 SNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKTVVELAKAGKTRQ 1137
            +N  ADALSRK E A++       +S+  G + D+++E L  DP AK+++ LA   KT+Q
Sbjct: 992  ANHVADALSRKAELASI-------TSQPQGDIMDLLREGLQHDPVAKSLIALAHEEKTKQ 1051

Query: 1138 FWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRD 1197
            FWVE  L+ TKG RLYVP+ G +R+ LI+ECHDT WAGHPG +RT AL++  Y+WP +RD
Sbjct: 1052 FWVEDGLIYTKGRRLYVPKWGNIRRNLIKECHDTKWAGHPGQRRTMALLESAYYWPQIRD 1111

Query: 1198 DIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIV 1257
            ++  Y + CL+CQQDKVE+ +  GLLEPLPV  RPW++V++DFI  LPK  D D+I+V+V
Sbjct: 1112 EVEAYVRXCLVCQQDKVEQRQPRGLLEPLPVAERPWDNVTMDFIIGLPKSEDNDSIIVVV 1171

Query: 1258 DRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLG 1317
            DRFSKYATFI  P  C+AE TA LF KH+VK WG+P  IISDRD RF G FW ELF  +G
Sbjct: 1172 DRFSKYATFIAAPTACTAEETARLFLKHVVKYWGLPKFIISDRDPRFTGKFWMELFKLMG 1231

Query: 1318 TTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGK 1377
            + L+ S+S+HPQTDGQTER N LLE YLRHFV A Q++W +LLD+ QF +N Q S +T K
Sbjct: 1232 SELHFSTSFHPQTDGQTERVNALLELYLRHFVSANQRDWAKLLDITQFSYNLQRSEATNK 1291

Query: 1378 SPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKK 1437
            +PFE+ +G+QP  PH +   Y G++P A    + W +  DIAR+YL+KA+K MKKWADKK
Sbjct: 1292 NPFELATGQQPLTPHTLTIGYTGRSPAAFKIAKGWHEQADIARSYLDKAAKKMKKWADKK 1316

Query: 1438 RRPLQFRAGDQVLIKLKPEQIR 1451
            R   +++ GD VL+KL P+Q +
Sbjct: 1352 RHHTEYKVGDMVLVKLLPQQFK 1316

BLAST of CmaCh00G001230 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.0e-22
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 1

Query: 837 HLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGH--VVKCGHISMDSDKIKAIQEWKVPTS 896
           HL +V     Q+Q Y  ++KCAF Q  I +LGH  ++    +S D  K++A+  W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 897 VSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLKTTMMRGPV 956
            ++LR FLGL  YYRRFV+ + +   PLTELLKK ++  W++   +AF+ LK  +   PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKK-NSLKWTEMAALAFKALKGAVTTLPV 122

Query: 957 LGLVDVTKPF 965
           L L D+  PF
Sbjct: 123 LALPDLKLPF 131

BLAST of CmaCh00G001230 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba])

HSP 1 Score: 1723.8 bits (4463), Expect = 0.0e+00
Identity = 837/1394 (60.04%), Postives = 1062/1394 (76.18%), Query Frame = 1

Query: 63   ELMFRVTSLEERVAPTSSPKPSGSPDSSVAHKEGRGEEFDVLQNTMMSLFNGLADEFRTT 122
            ++  RV++LE       +  PS S   +   ++G  EE       +MS  N L ++FR T
Sbjct: 227  DIASRVSALERNQTTWGNAGPSSS---TAGERDGAMEE---AIERLMSTVNELTEDFRAT 286

Query: 123  IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGNRDAKELENFIFD 182
            ++ ++  M  + T++ +TM+AVEN  A        +++  +PRA+ G RDAKELENF+FD
Sbjct: 287  VEALKIEMGQINTKLAITMRAVENRPAVPVGGDYGRMKVPEPRAYGGARDAKELENFLFD 346

Query: 183  VEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQDIEDGLCTIDSWEDLKKELRDQF 242
            +EQYF+A    +++ KVT+A+MYL +DAKLWWR+K +DI++  C ID+W+ L+KEL++QF
Sbjct: 347  MEQYFRAIKPDSEETKVTMATMYLTNDAKLWWRSKYEDIKNNRCIIDTWDQLQKELKNQF 406

Query: 243  LPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFINGLQPWAKTKL 302
            LPEN  ++A   L  L+ TG +RDYV+ FS LMLDIR  SEKDK+F+F+ GL+PWA+T+L
Sbjct: 407  LPENVDYIARRHLRELRQTGNVRDYVKAFSALMLDIRDMSEKDKLFYFLEGLKPWARTEL 466

Query: 303  HENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGG--KPYKPPSHRNGSPNRPNGG 362
               +VQ LA A+  AERL+DY  E+   RR  P+P+     +P++P      +  RP G 
Sbjct: 467  QRQRVQDLASALGAAERLMDYSTESPINRRPQPSPSNANSSRPFRP-----ANLPRPGGS 526

Query: 363  NDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQCMLCKGPHKVSYCPHRASLTALQVS 422
            + R    T  PP  N       P         PL C LC GPH+V  CPH+ +L+ALQ S
Sbjct: 527  DSRKPPNTREPPPRNPNAFGFRP--------RPLTCFLCNGPHRVGECPHKTALSALQAS 586

Query: 423  I--QESNDARIETMLDKKEDQDNPRMGALKFLSALQRKV-ESKEIVEKGLMFVNATINSQ 482
            I  QE    R E +   +E +D  ++GAL+FL+AL  +V ++++  EKGLMFV+A IN +
Sbjct: 587  IRSQEHEGGREEVV---EEGEDGAQVGALRFLNALNGQVVQARKTNEKGLMFVDAAINGK 646

Query: 483  PNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKRVPFKIGDWT 542
              +S ++D+GATHNF ++ EARRLGL + KD G+MKAVNS+ALP VG++K+VP K+G W 
Sbjct: 647  AAKSVMVDTGATHNFCSEIEARRLGLRLQKDAGQMKAVNSKALPTVGLAKQVPLKLGTWE 706

Query: 543  GELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQPGNLRMIS 602
              +DL+V  MDDFDV+LGM+FL++ K IP+P A  L++      VIP   KQ  N +++S
Sbjct: 707  DRVDLIVVPMDDFDVILGMDFLVKKKAIPIPAANSLLMMGEQTGVIPVQRKQLNNPKLLS 766

Query: 603  AIQLKRGLAREEPTFMAIPLMEVTTNEETVPNEINEVLNDYADIMPESLPQTLPPRRGID 662
            A+Q K+G+ R+EP+++A+ +     ++ET P  + + L  + D+MP++LP+ LPPRR ID
Sbjct: 767  ALQFKKGVRRKEPSYIALVVAREGEDDETTPPMVLDALKSFNDVMPDNLPRNLPPRRDID 826

Query: 663  HEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGT 722
            H IELIPG KPPAK  YRMAPPELAELRKQL ELL+AGF+RP+KAPYGAPVLFQKKKDGT
Sbjct: 827  HNIELIPGAKPPAKAPYRMAPPELAELRKQLGELLEAGFLRPSKAPYGAPVLFQKKKDGT 886

Query: 723  LRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTT 782
            LRLC+DYRALNKVTVRNKYP+ +I+DLFDQL GAK+FTKLDLRSGYYQVRIAEGDE KTT
Sbjct: 887  LRLCVDYRALNKVTVRNKYPIPLIADLFDQLSGAKFFTKLDLRSGYYQVRIAEGDEEKTT 946

Query: 783  CVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVH 842
            CVTRYGAFEFLVMPFGLTNAPATFCTLMNQVF ++LD+FV+VYLDDIV++S TLEEH  H
Sbjct: 947  CVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFRDFLDKFVVVYLDDIVIFSPTLEEHVEH 1006

Query: 843  LKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMDSDKIKAIQEWKVPTSVSD 902
            +++V  +LR+NQL+VKKEKCAF +  I FLGH+++ G I MD +K+KAIQEWK P +V +
Sbjct: 1007 IRMVLQRLRENQLFVKKEKCAFGRRQIKFLGHIIEEGKIRMDMEKVKAIQEWKTPANVKE 1066

Query: 903  LRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLKTTMMRGPVLGL 962
            LRSFLGLANYYRRFV+G+S++A PLTELLKK+  W WS +C+ AF+DLK  MM+ PVL L
Sbjct: 1067 LRSFLGLANYYRRFVKGYSKKATPLTELLKKEVPWEWSKECEGAFQDLKEAMMKDPVLAL 1126

Query: 963  VDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVW 1022
             D+T+PFE++TDASDFALGGVL+Q+GHP+A+ESRKL+  E  YT  EKEMLAV+HCLR W
Sbjct: 1127 PDITRPFEVQTDASDFALGGVLLQDGHPVAYESRKLSAAERNYTAQEKEMLAVIHCLRTW 1186

Query: 1023 RQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQAADALS 1082
            R YLLGS FVVKTDNSA+ HF  QPKLT KQARWQE +AEFD +FEHKAG  NQAADALS
Sbjct: 1187 RHYLLGSSFVVKTDNSAVSHFLTQPKLTPKQARWQEFIAEFDLQFEHKAGTKNQAADALS 1246

Query: 1083 RKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKTVVELAKAGKTRQFWVEGDLLM 1142
            RK E AAL ++A++ +S I  SMR++IK+HL  D  A+ +++L K GKTRQFW E DLL 
Sbjct: 1247 RKTELAALRVVANMAASTIANSMRELIKQHLGGDQCAQNILKLCKEGKTRQFWEEDDLLW 1306

Query: 1143 TKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTC 1202
            TKGNRL+VP+ G+LRK+L++ECHDTLWAGHPGWQRTYALIK+GY+WP MRDDIM Y +TC
Sbjct: 1307 TKGNRLFVPKAGDLRKRLMRECHDTLWAGHPGWQRTYALIKQGYYWPQMRDDIMDYIRTC 1366

Query: 1203 LICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATF 1262
            L+CQQDKVE+ K  GLLEPL VP+ PWESVS+DFIT+LPK+GD  +ILVIVDRFSKYATF
Sbjct: 1367 LVCQQDKVERQKTPGLLEPLFVPSCPWESVSIDFITNLPKIGDLSSILVIVDRFSKYATF 1426

Query: 1263 IPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSY 1322
            IP  K C+AE TA LFFK++VK WG+P  I+SDRD +F G+FWTELF  LG+ LNISSSY
Sbjct: 1427 IPASKFCTAEETARLFFKYVVKYWGVPRHIVSDRDAKFTGSFWTELFKLLGSQLNISSSY 1486

Query: 1323 HPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGR 1382
            HPQTDGQTERFN +LEEYLRHFV A QKNW QLLDVAQFCFN Q  S T K PFEIV+G+
Sbjct: 1487 HPQTDGQTERFNGMLEEYLRHFVSANQKNWAQLLDVAQFCFNAQKGSPTSKCPFEIVNGQ 1546

Query: 1383 QPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKASKHMKKWADKKRRPLQFRAG 1442
            +P LPH +D  Y GKNP+A NFT+EWK   +IARAYLEKA+  MKKWADK RRPL+F AG
Sbjct: 1547 KPLLPHTVDE-YQGKNPRAFNFTKEWKNNMEIARAYLEKAANRMKKWADKDRRPLEFNAG 1597

Query: 1443 DQVLIKLKPEQIRF 1452
            D V++KL  EQ R+
Sbjct: 1607 DMVMVKLTREQFRW 1597

BLAST of CmaCh00G001230 vs. NCBI nr
Match: gi|147826806|emb|CAN63950.1| (hypothetical protein VITISV_032357 [Vitis vinifera])

HSP 1 Score: 1408.3 bits (3644), Expect = 0.0e+00
Identity = 714/1357 (52.62%), Postives = 927/1357 (68.31%), Query Frame = 1

Query: 112  FNGLADEFRTTIDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLD--PRA--- 171
            F    D+  T    ++ RM ++  R++V  + +    A      S ++      PR    
Sbjct: 96   FMSFQDKVMTMFASVESRMEALAARMDVRDQEIRQELAIYKTAVSARVMATHEAPRVEVP 155

Query: 172  ----FKGNRDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQDIE 231
                F G RDAKEL+NF++ +E+YF+A     +  KV  A++YL D+A LWWR +  DIE
Sbjct: 156  KLHTFSGKRDAKELDNFLWHMERYFEAIALTDEATKVRTATLYLTDNATLWWRRRFADIE 215

Query: 232  DGLCTIDSWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTS 291
             G CTID+W+  K+E++ QF PE+  +LA + L  LKHTG IR+YV++FSTLML+I   +
Sbjct: 216  RGTCTIDTWDAFKREIKRQFYPEDVAYLARKNLKRLKHTGSIREYVKEFSTLMLEIPNMA 275

Query: 292  EKDKVFFFINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGK 351
            E++ +F F++ LQ WA+ +L    VQ LA AMA AE L+DY     S            K
Sbjct: 276  EEELLFNFMDNLQSWAEQELRRRGVQDLATAMAVAESLVDYRKGDSS------------K 335

Query: 352  PYKPPSHRNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPY-------HQRNHPTTPLQ 411
            P KPPS      N+  GG D+ S+         + G+S+GP         +R   T    
Sbjct: 336  P-KPPS----KGNQAKGGGDKRSQG-----HTPKEGSSKGPSGKDGKGKDKRKEFTPRTN 395

Query: 412  CMLCKGPHKVSYCPHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQR 471
            C LC GPH    CP R +L A               M+++K  + + +MG+L  L AL+ 
Sbjct: 396  CFLCDGPHXARDCPKRKALNA---------------MIEEKXQEGDAKMGSLXLLXALKA 455

Query: 472  KVESKEIVEKGLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAV 531
            K   K    K LM+V   +N +  ++ L+D+GATHNF+++ EARRL L   K+ G +KAV
Sbjct: 456  KXMPKTPQSKXLMYVETLVNGKATKA-LVDTGATHNFVSEDEARRLELQASKEGGWLKAV 515

Query: 532  NSEALPIVGVSKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCL-V 591
            NS A P  GV++ V   IG W G +D  VA MDDF +VLGM+FL + K +P+P  + + +
Sbjct: 516  NSAAKPSHGVARGVTMHIGLWEGRVDFTVAPMDDFKMVLGMDFLQKVKAVPLPFLRSMAI 575

Query: 592  ITDRNPTVIPASIKQPGNLRMISAIQLKRGLAREEPTFMAIPLMEVTTNE-ETVPNEINE 651
            + +  P ++P   +      M+SA+Q+K+GL REE T++A    E      E +P EI  
Sbjct: 576  LEEEKPCMVPTVTEGTPKTPMLSAMQVKKGLKREEVTYLATLKEEKDDGSGEPMPKEIKG 635

Query: 652  VLNDYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLK 711
            VL+++ D+M   LP+ L PRR  +H+I+L  G KP A   YRMAPPEL ELR+QL ELL 
Sbjct: 636  VLDEFKDVMXPELPKRLXPRREEBHKIKLEXGAKPRAMGPYRMAPPELEELRRQLKELLD 695

Query: 712  AGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKY 771
            AGFI+P+KAPYGAPVLFQKK DG+LR+CIDYRALNKVTV+NKYP+ +I+DLFDQL  A+Y
Sbjct: 696  AGFIQPSKAPYGAPVLFQKKHDGSLRMCIDYRALNKVTVKNKYPIPLIADLFDQLGRARY 755

Query: 772  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYL 831
            FTKLDLRSGYYQVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNAPATFCTLMN++F+ YL
Sbjct: 756  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCTLMNKIFHPYL 815

Query: 832  DQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKC 891
            D+FV+ YLDDIV+YS TL+EH+ HL+ VF  LRQN+LYVKKEKC+FA+  +NFLGH ++ 
Sbjct: 816  DKFVVXYLDDIVIYSNTLKEHEEHLRKVFKILRQNKLYVKKEKCSFAKEEVNFLGHRIRD 875

Query: 892  GHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWS 951
            G + MD  K+KAIQEW  PT V  LRSFLGL NYYRRF++G+S RAAPLT+LLKK+  W 
Sbjct: 876  GKLMMDDSKVKAIQEWDPPTKVPQLRSFLGLVNYYRRFIKGYSGRAAPLTDLLKKNKAWE 935

Query: 952  WSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKL 1011
            W   CQ AFEDLK  +   PVL L D TK FE+ TDASDFA+GGVL+QE HPIAFESRKL
Sbjct: 936  WDGRCQQAFEDLKKAVTEEPVLALPDHTKVFEVHTDASDFAIGGVLMQERHPIAFESRKL 995

Query: 1012 NDVELRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQE 1071
            N+ E RYTV EKEM A+VHCLR WR YLLGS F+VKTDN A  +F  Q KL+ KQARWQ+
Sbjct: 996  NNAERRYTVQEKEMTAIVHCLRTWRHYLLGSHFIVKTDNVATSYFQTQKKLSPKQARWQD 1055

Query: 1072 SLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPS 1131
             LAEFD+  E+K G +N  ADALSRK E A++       SS+  G +  +++E L  DP 
Sbjct: 1056 FLAEFDYTLEYKPGSANHVADALSRKAELASI-------SSQPQGDIMYLLREGLQHDPV 1115

Query: 1132 AKTVVELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRT 1191
            AK+++ LA  GKT++FWVE  LL TKG RLYVP+ G +R+ LI+ECHDT WAGHPG +RT
Sbjct: 1116 AKSLIALAHEGKTKRFWVEDGLLYTKGRRLYVPKWGNIRRNLIKECHDTKWAGHPGQRRT 1175

Query: 1192 YALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFIT 1251
             AL++  Y+WP +RD++  Y +TCL+CQQDKVE+ +  GLLEPLPV  RPW+SV++DFI 
Sbjct: 1176 RALLESAYYWPQIRDEVEAYVRTCLVCQQDKVEQRQPRGLLEPLPVAERPWDSVTMDFII 1235

Query: 1252 HLPKVGDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDG 1311
             LPK  D  +I+V+VDRFSKYATFI  P  C+AE TA LF KH+VK WG+P  IISDRD 
Sbjct: 1236 GLPKSEDSGSIIVVVDRFSKYATFIAAPTDCTAEETARLFLKHVVKYWGLPKFIISDRDP 1295

Query: 1312 RFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDV 1371
            RF G FWTELF  +G+ L+ S+S+HPQTDGQTER N LLE YLRHFV A Q++W +LLD+
Sbjct: 1296 RFTGKFWTELFKLMGSELHFSTSFHPQTDGQTERXNALLELYLRHFVSANQRDWAKLLDI 1355

Query: 1372 AQFCFNCQTSSSTGKSPFEIVSGRQPALPHIIDHPYAGKNPQAHNFTREWKQTTDIARAY 1431
            AQF +N Q S +T KSPFE+ +G+QP  PH +   Y G++P A  F + W +  DIA +Y
Sbjct: 1356 AQFSYNLQRSEATNKSPFELATGQQPLTPHTLXIGYTGRSPAAFKFAKGWHEQADIAXSY 1407

Query: 1432 LEKASKHMKKWADKKRRPLQFRAGDQVLIKLKPEQIR 1451
            L+KA+K MKKWADKKRR  +++ GD VL+KL P+Q +
Sbjct: 1416 LDKAAKKMKKWADKKRRHTEYKVGDMVLVKLLPQQFK 1407

BLAST of CmaCh00G001230 vs. NCBI nr
Match: gi|1009176455|ref|XP_015869440.1| (PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba])

HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 667/1222 (54.58%), Postives = 860/1222 (70.38%), Query Frame = 1

Query: 183  VEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQDIEDGLCTIDSWEDLKKELRDQF 242
            +E+YF+A     + +KV  A++YL + A +WWR K ++++ G+C I+SWEDLK EL  QF
Sbjct: 1    MERYFEALDFQDEKQKVNTATLYLTNLAAVWWRRKHEEMKKGICAINSWEDLKSELTKQF 60

Query: 243  LPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFINGLQPWAKTKL 302
             PEN  + A +++  LKH   IR+YV QFS LML I   SE D +F F++GLQPWA  +L
Sbjct: 61   YPENVANEARKRMKELKHQRSIREYVEQFSGLMLQIPNMSEDDLLFNFMDGLQPWACQEL 120

Query: 303  HENKVQTLADAMACAERLLDY--GNEAGSQRRITPAPNTGGKPYKPPSHRNGSPNRPNGG 362
                VQ ++ A+  AE L++Y  G  + S+ +I      G K +K P  +          
Sbjct: 121  QRRGVQDISTALTTAETLVEYRQGESSNSKPKINYIKGGGAKFHKTPQSK---------- 180

Query: 363  NDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQCMLCKGPHKVSYCPHRASLTALQVS 422
                 E+  RPP  ++     G    +        C LC GPH    CP R SL A    
Sbjct: 181  -----EFPRRPPLPSKDWKKGGKPEFKPKEN----CFLCDGPHWARDCPKRKSLNA---- 240

Query: 423  IQESNDARIETMLDKKEDQDNPRMGALKFLSALQRK-VESKEIVEKGLMFVNATINSQPN 482
                       ML+++E  ++ +MG L+ L++L+   + +    +  LM+V A IN + +
Sbjct: 241  -----------MLEERETHEHTQMGCLQLLNSLKASPIPAHNAKDNSLMYVAARINGK-D 300

Query: 483  RSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGVSKRVPFKIGDWTGE 542
               ++D+GA+HNFI  +EARRLGL + K  G +K VN+EA P+ G+++ V   +G W G 
Sbjct: 301  AQVMVDTGASHNFIKREEARRLGLKLDKGQGWLKTVNAEAKPLDGMARNVELHLGTWQGN 360

Query: 543  LDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIPASIKQPGNLRMISAI 602
            ++  +A +DDFD+VLGMEFL +  V+P+P    + I +  P +IP +I +P     +SA+
Sbjct: 361  VNFSIAPLDDFDIVLGMEFLRQFNVVPLPRYNTVCIMEGGPCMIP-TIHKPSTSNRLSAM 420

Query: 603  QLKRGLAREEPTFMAIPLMEVTTNEETVPNEINEVLNDYADIMPESLPQTLPPRRGIDHE 662
            QLK+G+ + EPTF+A    E     +  P E+++VL ++ D+MP  LP+ LPPRR +DH 
Sbjct: 421  QLKKGVKKGEPTFLATLREEEEVTSKEPPKEVSQVLEEFKDVMPPQLPKKLPPRREVDHC 480

Query: 663  IELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAPVLFQKKKDGTLR 722
            IEL PG KPPAK  YRM+P EL ELR+QL ELL AG+I+P+KAPYGAPVLFQKK DG+LR
Sbjct: 481  IELEPGAKPPAKAPYRMSPSELEELRRQLKELLDAGYIQPSKAPYGAPVLFQKKHDGSLR 540

Query: 723  LCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDLRSGYYQVRIAEGDEPKTTCV 782
            LCIDYRALNKVT++NKYP+ +I+DLFDQL GA+YFTKLDLRSGYYQVRIAEGDEPKTTCV
Sbjct: 541  LCIDYRALNKVTIKNKYPIPLIADLFDQLGGARYFTKLDLRSGYYQVRIAEGDEPKTTCV 600

Query: 783  TRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIVYLDDIVVYSTTLEEHKVHLK 842
            TRYGA+EFLVMPFGLTNAPATFCTLMN++F+ YLD+FV+VYLDDIV+YS TLEEH  HL+
Sbjct: 601  TRYGAYEFLVMPFGLTNAPATFCTLMNKIFHPYLDKFVVVYLDDIVIYSKTLEEHIHHLR 660

Query: 843  LVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMDSDKIKAIQEWKVPTSVSDLR 902
            +VF  L+ N+LYVK+EKC+FA   + FLGH +K G + MD  K+KAIQEW  PT VS+LR
Sbjct: 661  IVFKVLKDNELYVKREKCSFATNEVYFLGHKIKDGKLHMDEAKVKAIQEWDPPTKVSELR 720

Query: 903  SFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQMAFEDLKTTMMRGPVLGLVD 962
            SFLGL NYYRRF++G+S  AAPLT+LLKK+ TWSWS  CQ AFE+LK  +M+ PVL L D
Sbjct: 721  SFLGLVNYYRRFIKGYSALAAPLTDLLKKNKTWSWSTQCQQAFENLKEAIMKEPVLALPD 780

Query: 963  VTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELRYTVSEKEMLAVVHCLRVWRQ 1022
             +KPFE+ TDASDFA+GGVL+QE HPIAFESRKLND E RYTV EKEM A++HCLR WR 
Sbjct: 781  CSKPFEVHTDASDFAIGGVLMQERHPIAFESRKLNDTERRYTVQEKEMTAIIHCLRTWRH 840

Query: 1023 YLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFDFKFEHKAGKSNQAADALSRK 1082
            YLLGS+FVVKTDN A  +F  Q KL+ KQARWQ+ LAEFD+K E+K G +N  ADALSRK
Sbjct: 841  YLLGSKFVVKTDNVATSYFQTQKKLSPKQARWQDFLAEFDYKLEYKPGTANVVADALSRK 900

Query: 1083 GEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPSAKTVVELAKAGKTRQFWVEGDLLMTK 1142
             E A++        +K  G + ++IKE + +D  AK +++LA  GKT++FWVE  LL TK
Sbjct: 901  AELASI--------TKFQGELLNLIKEGMDRDVVAKQLLQLAMEGKTKRFWVEDGLLYTK 960

Query: 1143 GNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIKKGYFWPNMRDDIMQYTKTCLI 1202
            G+R+YVPR G +RK LI+ECHDT WAGHPG +RT AL++  Y+WP MRDDI  Y KTCL+
Sbjct: 961  GHRIYVPRWGNIRKNLIKECHDTKWAGHPGQKRTRALLETNYYWPQMRDDIEMYVKTCLV 1020

Query: 1203 CQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKVGDYDAILVIVDRFSKYATFIP 1262
            CQQDKVE+ + +GLLEPLP P RPWES+S+DFI  LPK      I+V+VDRFSKYATFI 
Sbjct: 1021 CQQDKVEQRQPAGLLEPLPTPERPWESISMDFIISLPKSEGCSTIIVVVDRFSKYATFIA 1080

Query: 1263 TPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGTFWTELFAFLGTTLNISSSYHP 1322
              K C AE TA LFFKH+VK WG+P SIISDRD RF G FWTELF  +G+ L+ S+S+HP
Sbjct: 1081 ATKECPAEETARLFFKHVVKYWGLPRSIISDRDSRFTGRFWTELFKLMGSELHFSTSFHP 1140

Query: 1323 QTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCFNCQTSSSTGKSPFEIVSGRQP 1382
            QTDGQTER N LLE YLRHFV A Q +W +LLDVAQF +N Q S ST +SPFE+ +G+QP
Sbjct: 1141 QTDGQTERANALLELYLRHFVSANQHDWAKLLDVAQFSYNLQRSESTNRSPFELATGQQP 1178

Query: 1383 ALPHIIDHPYAGKNPQAHNFTR 1402
              P  +   Y G++P A    +
Sbjct: 1201 LTPQTLVTKYGGRSPAAFKIAK 1178

BLAST of CmaCh00G001230 vs. NCBI nr
Match: gi|147768682|emb|CAN76063.1| (hypothetical protein VITISV_040632 [Vitis vinifera])

HSP 1 Score: 1307.0 bits (3381), Expect = 0.0e+00
Identity = 692/1409 (49.11%), Postives = 922/1409 (65.44%), Query Frame = 1

Query: 58   GLPIAELMFRVTSLEERVAPTSSPKPSGSPDSSVAHKEGRGEEFDVLQNTMMSLFNGLAD 117
            G  +  L  R+T LEE +     P+  G+  S   +  G   E  + +N + S  N + +
Sbjct: 4    GSAMEALRERMTQLEEALGEW--PRDDGTVASWAENTMG---EIQLQRNMLESHDNFVEE 63

Query: 118  ---EFRTT----IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGN 177
               EF+T     ID+ +  + + G  I V  KAV   +A      S K+R  +P+ F GN
Sbjct: 64   KMAEFKTEMQSRIDEFKXTLQTYGEDIAVLKKAVLQGSASGPEAPS-KVRVPEPKGFNGN 123

Query: 178  RDAKELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTKVQD-IEDGLCTID 237
             +AK LENF++D+EQ+FKA     D +KV++ SMYL  DAKLWWRT+++D  E G   I 
Sbjct: 124  XNAKXLENFLWDIEQFFKAAHV-PDGEKVSITSMYLTGDAKLWWRTRMEDDAESGRPQIT 183

Query: 238  SWEDLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFF 297
            +WE LKKEL+DQFLP N   +A E L  L+HTG +R+YV++FS+LMLDI+  SE+DK+F 
Sbjct: 184  TWETLKKELKDQFLPTNTAWVAREALKRLRHTGSVREYVKEFSSLMLDIKNMSEEDKLFN 243

Query: 298  FINGLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTGGKPYKPPSH 357
            F++GLQ WA+T+L    V+ L  AM  A+ L+D   + G     T  P + G        
Sbjct: 244  FMSGLQGWAQTELRRQGVRDLPAAMXAADCLVD--XKMGGASSTTQRPKSEG-------- 303

Query: 358  RNGSPNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQR----NHPTTPLQCMLCKGPHKV 417
              G   +  G   + S W     Q  +      P  +        T  + C +C GPH+ 
Sbjct: 304  --GKKAKFEGKTSQKSGW---KKQGKKPAVGGKPVEKTTKVVQQTTRMMGCFICNGPHRA 363

Query: 418  SYCPHRASLTALQVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVEK 477
              CP R  L+AL V+ ++  D+  ET          PR+  L+ L+A             
Sbjct: 364  KDCPKREKLSAL-VTXEDKGDSDPET---------PPRVNPLQLLNA------------- 423

Query: 478  GLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVGV 537
                             L+DSGATHNF+A +EA RLGL + +D  ++KAVNS+A  I GV
Sbjct: 424  -----------------LVDSGATHNFVATKEAARLGLRLEEDTSRIKAVNSKAQKIQGV 483

Query: 538  SKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMP-LAKCLVITDRNPTVIP 597
            +K VP KIGDW G   L+   +DDFD++LG++FLL  KV  +P L   +V+ ++ P  + 
Sbjct: 484  AKNVPMKIGDWEGMCSLLCVPLDDFDLILGVDFLLRAKVALIPHLGGLMVLEEKQPCFVQ 543

Query: 598  ASIKQPGNL---RMISAIQLKRGLAREEPTFMA--IPLMEVTTNEETVPNEINEVLNDYA 657
            A   + G      M+SAIQLK+GL R + T++A  I + E  T E  VP+ + ++L +++
Sbjct: 544  ALRAKDGGKGQPEMLSAIQLKKGLKRGQETYVAALIEIKEGQTME--VPDSVVKILKEFS 603

Query: 658  DIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLKAGFIRP 717
            D+MP  LP+ LPPRR IDH+IEL+PG K PA+  YRM+P EL ELRKQL ELL AG I+P
Sbjct: 604  DVMPAELPKELPPRRPIDHKIELLPGTKAPAQAPYRMSPAELLELRKQLKELLDAGLIQP 663

Query: 718  AKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKYFTKLDL 777
            ++APYGAPVLFQKK DG+LR+C+DYRALNKVT++NKYP+ + ++LFD+L  A YFTKLDL
Sbjct: 664  SRAPYGAPVLFQKKHDGSLRMCVDYRALNKVTIKNKYPIPLAAELFDRLSKASYFTKLDL 723

Query: 778  RSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYLDQFVIV 837
            RSGY+QVR+A GDE KTTCV RYG++EFLVMPFGLTNAPATFC LMN V ++YLD FV+V
Sbjct: 724  RSGYWQVRVAAGDEGKTTCVXRYGSYEFLVMPFGLTNAPATFCNLMNDVLFDYLDXFVVV 783

Query: 838  YLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKCGHISMD 897
            YLDDIVVYS TL EH+ HL+LVF +LR+N+LYVK EKC FAQ  I FLGH +  G I MD
Sbjct: 784  YLDDIVVYSKTLTEHEKHLRLVFQRLRENRLYVKPEKCEFAQEEITFLGHKISAGLIRMD 843

Query: 898  SDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWSWSDDCQ 957
              K++AI EW VP+ V++LRSFLGLANYYRRF++G+S+  +PLT+LLKKD+ W WS  CQ
Sbjct: 844  KGKVQAIMEWTVPSKVTELRSFLGLANYYRRFIKGYSKTVSPLTDLLKKDNQWDWSRQCQ 903

Query: 958  MAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKLNDVELR 1017
            MAFE LK  M   P L L D+   FE++TDAS+ ALGGVL+QEGHP+AFESRKLN+ E R
Sbjct: 904  MAFESLKEAMSTEPXLRLPDLDLXFEVQTDASBRALGGVLVQEGHPVAFESRKLNNAEQR 963

Query: 1018 YTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQESLAEFD 1077
            Y+  EKEM AVVHCLR WR YLLGS F V TDN A   F  Q KL+ +QARWQE LA+F+
Sbjct: 964  YSTHEKEMTAVVHCLRQWRHYLLGSIFTVVTDNVANTFFKTQKKLSPRQARWQEFLADFN 1023

Query: 1078 FKFEHKAGKSNQAADALSRKGEHAALCMLAHIHS-SKIDGSMRDIIKEHLHKDPSAKTVV 1137
            F++ H+ G+ N  AD LSRK       ++ +I + S++     + IK    +D +   + 
Sbjct: 1024 FEWLHRPGRHNTVADVLSRKE------LITYITALSEVISDFNEKIKHAAEQDAAYGRLR 1083

Query: 1138 ELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRTYALIK 1197
            +  K G  R++W+EGDLL+ KG R YVP  G LRK+L++E HD  WAGHPG +RT AL+ 
Sbjct: 1084 QQVKEGVIRRYWLEGDLLVAKGGRWYVP-AGGLRKELLRETHDAKWAGHPGEERTLALLA 1143

Query: 1198 KGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFITHLPKV 1257
            + Y+WP M +++  Y KTCL+CQ DK E+ K +GLL+PLP+P +PWES+S+DFI+  PKV
Sbjct: 1144 RSYYWPKMGEEVQAYVKTCLVCQMDKTERKKAAGLLQPLPIPEKPWESISMDFISGFPKV 1203

Query: 1258 GDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDGRFIGT 1317
             D+ ++ V+VDRFSKYA FIP P  C AE  A+LFF ++VK +G+P  I+SDRD RF G 
Sbjct: 1204 RDFKSVFVVVDRFSKYAVFIPAPDTCXAEEAAKLFFSNVVKHFGLPRDIVSDRDARFTGK 1263

Query: 1318 FWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDVAQFCF 1377
            FW ELF  LG+ L  S++ HPQTDGQTER N LLEEYLRH+V A QKNW+ L+D AQ C+
Sbjct: 1264 FWVELFKLLGSELKFSTANHPQTDGQTERINALLEEYLRHYVTATQKNWVDLMDTAQLCY 1323

Query: 1378 NCQTSSSTGKSPFEIVSGRQPALP-HIIDHPYAGKNPQAHNFTREWKQTTDIARAYLEKA 1437
            N Q SS+TG SPFE+  G QP +P  +      G +P A+   +  ++  D AR  LEKA
Sbjct: 1324 NLQRSSATGMSPFELAIGVQPXMPLXVAKQKVGGNSPAAYKMAQSRQEMLDEARDSLEKA 1341

Query: 1438 SKHMKKWADKKRRPLQFRAGDQVLIKLKP 1447
            ++ MKK+AD+ RR L+F+ GD+VL+KL P
Sbjct: 1384 ARRMKKYADRDRRSLEFQVGDRVLLKLTP 1341

BLAST of CmaCh00G001230 vs. NCBI nr
Match: gi|4235644|gb|AAD13304.1| (polyprotein [Solanum lycopersicum])

HSP 1 Score: 1243.8 bits (3217), Expect = 0.0e+00
Identity = 650/1355 (47.97%), Postives = 887/1355 (65.46%), Query Frame = 1

Query: 118  EFRTT----IDDIQERMASMGTRIEVTMKAVENVTAGQANTGSNKLRFLDPRAFKGNRDA 177
            +FR T    ++ +Q+   ++   + V  +AV   T       S+K++  DP+AF G R A
Sbjct: 67   DFRATTTQKLEGLQKENENLRAELVVLCRAV--ATLSSTRVESSKVKIPDPKAFSGARSA 126

Query: 178  KELENFIFDVEQYFKATTACTDDKKVTVASMYLIDDAKLWWRTK-VQDIEDGLCTIDSWE 237
            KELENFI+D+EQYF A     D  K+ + +MYL  DAKLWWRT+   D+  G   ID+W+
Sbjct: 127  KELENFIWDMEQYFTAARV-PDADKLNITTMYLSGDAKLWWRTRNADDVSAGRPRIDTWD 186

Query: 238  DLKKELRDQFLPENAGHLAMEKLVALKHTGGIRDYVRQFSTLMLDIRGTSEKDKVFFFIN 297
             L KE+RDQFLP NA  LA +KL  L+ TG +R+Y+++F+++MLDI+  S++DK+  FI+
Sbjct: 187  KLIKEMRDQFLPSNASWLARDKLKRLRQTGSVREYIKEFTSVMLDIQNMSDEDKLHNFIS 246

Query: 298  GLQPWAKTKLHENKVQTLADAMACAERLLDYGNEAGSQRRITPAPNTG---GKPYKPPSH 357
            G+Q WA+ +L    V+ L  A+A A+ L+D+     + R  T  P+T     K  K    
Sbjct: 247  GMQGWAQNELRRQNVKDLPGAIAAADSLVDF----RTTRPSTDVPSTSKNKKKNEKKGEW 306

Query: 358  RNGS--PNRPNGGNDRPSEWTDRPPQNNQAGTSRGPYHQRNHPTTPLQCMLCKGPHKVSY 417
            R  S   N  + G  +  +  DRP   ++ G S+G             C  C GPH    
Sbjct: 307  RKDSRKENANDKGKAQMKDGKDRP--KSKDGNSKG-------------CWTCGGPHLAKS 366

Query: 418  CPHRASLTAL---QVSIQESNDARIETMLDKKEDQDNPRMGALKFLSALQRKVESKEIVE 477
            CP+R  + AL    V+ +E ++  +  M +      N  MG         R++ S     
Sbjct: 367  CPNREKVNALLAGNVNQREEDEEIVAAMANPLGLSFNHIMGINNV-----REISSTSNPH 426

Query: 478  KGLMFVNATINSQPNRSTLIDSGATHNFIADQEARRLGLTIGKDPGKMKAVNSEALPIVG 537
              L+ +   +  Q   + ++D+GATH F+  + A +LGL + K P  +K VN++A  IVG
Sbjct: 427  ASLIHIEMKVKEQCVMA-MVDTGATHTFVDVKIATKLGLKLSKSPSYVKTVNAKAQAIVG 486

Query: 538  VSKRVPFKIGDWTGELDLVVARMDDFDVVLGMEFLLEHKVIPMPLAKCLVITDRNPTVIP 597
            ++  V    G+W G+ +L+V  + DF+++LG++FL +++ +P P    +++   +     
Sbjct: 487  MAYSVSMSTGNWVGKHNLMVMPLGDFEIILGIDFLRKYQFVPFPHLDGVMVMSGSDAGFL 546

Query: 598  ASIKQPGNLR----------MISAIQLKRGLAREEPTFMAIPLMEVTTN-EETVPNEINE 657
              +   GN+           ++SA+ + +GL + + T +A  L+E+  + +  VP+ + E
Sbjct: 547  KGVHPFGNINKVAKKKDKEMLLSAMSIDKGLKKGDETILA-ALVEIKPDVKMEVPDCVAE 606

Query: 658  VLNDYADIMPESLPQTLPPRRGIDHEIELIPGVKPPAKNAYRMAPPELAELRKQLDELLK 717
            +L  YAD+MP  LP+ LPPRR IDH+IEL+PG   PA+  YRMAP EL ELRKQL+ELL 
Sbjct: 607  LLKQYADVMPPELPKKLPPRRDIDHKIELLPGTVAPAQAPYRMAPKELVELRKQLNELLD 666

Query: 718  AGFIRPAKAPYGAPVLFQKKKDGTLRLCIDYRALNKVTVRNKYPLLIISDLFDQLHGAKY 777
            AG I+P+KAPYGAPVLFQKK+DGT+R+C+DYRALNK T++NKY + ++ DL D+L  A +
Sbjct: 667  AGLIQPSKAPYGAPVLFQKKQDGTMRMCVDYRALNKATIKNKYSVPLVQDLMDRLSKACW 726

Query: 778  FTKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFYEYL 837
            FTKLDLR+GY+QVRIAEGDEPKTTCVTRYG++EFLVMPFGLTNAPATFC LMN V ++YL
Sbjct: 727  FTKLDLRAGYWQVRIAEGDEPKTTCVTRYGSYEFLVMPFGLTNAPATFCNLMNNVLFDYL 786

Query: 838  DQFVIVYLDDIVVYSTTLEEHKVHLKLVFDKLRQNQLYVKKEKCAFAQTCINFLGHVVKC 897
            D FV+VYLDDIV+YS TLEEH  HL LV  +LR+  LYVK EKC FAQ  I FLGH+V  
Sbjct: 787  DDFVVVYLDDIVIYSRTLEEHVNHLSLVLSQLRKYTLYVKMEKCEFAQQEIKFLGHLVSK 846

Query: 898  GHISMDSDKIKAIQEWKVPTSVSDLRSFLGLANYYRRFVEGFSRRAAPLTELLKKDHTWS 957
              + MD  K++AI +W+ P  V DLRSFLGLANYYR+F+ G+S++AA LT+LLKKD  W 
Sbjct: 847  NQVRMDPKKVQAIVDWQAPRHVKDLRSFLGLANYYRKFIAGYSKKAASLTDLLKKDAKWV 906

Query: 958  WSDDCQMAFEDLKTTMMRGPVLGLVDVTKPFEIETDASDFALGGVLIQEGHPIAFESRKL 1017
            WS+ C+ AF++LK  +   P+L L D   PFE+ TDASD A+GGVL+QEGHP+AFESRKL
Sbjct: 907  WSEQCEKAFQNLKNAIASEPILKLPDFELPFEVHTDASDKAIGGVLVQEGHPVAFESRKL 966

Query: 1018 NDVELRYTVSEKEMLAVVHCLRVWRQYLLGSQFVVKTDNSAICHFFDQPKLTAKQARWQE 1077
            ND E RY+  EKEM+AVVHCL+VWR YLLG++FVV+TDN A   F  Q KL+ KQARWQE
Sbjct: 967  NDAEQRYSTHEKEMVAVVHCLQVWRVYLLGTRFVVRTDNVANTFFKTQKKLSPKQARWQE 1026

Query: 1078 SLAEFDFKFEHKAGKSNQAADALSRKGEHAALCMLAHIHSSKIDGSMRDIIKEHLHKDPS 1137
             LAE+DF +EHK GK NQ ADALSRK    A+  +     SK++    D I+     D  
Sbjct: 1027 FLAEYDFMWEHKPGKHNQVADALSRKEVFVAVYSI-----SKLETDFYDRIRLCAANDSL 1086

Query: 1138 AKTVVELAKAGKTRQFWVEGDLLMTKGNRLYVPRTGELRKKLIQECHDTLWAGHPGWQRT 1197
                +   + G  R++W+E DLL  KG R+ VP  G LRK L++E +D+ WAGHPG +R 
Sbjct: 1087 YVKWMGQVQDGTMRRYWIEDDLLYFKGGRIVVPNQGGLRKDLMKEAYDSAWAGHPGVERM 1146

Query: 1198 YALIKKGYFWPNMRDDIMQYTKTCLICQQDKVEKAKVSGLLEPLPVPTRPWESVSLDFIT 1257
             AL+ + YFWP M DDI  Y KTC +CQ DK E+ K +GLL+PLP+P RPW SVS+DFI+
Sbjct: 1147 LALLSRVYFWPKMEDDIEAYVKTCHVCQVDKTERKKEAGLLQPLPIPERPWLSVSMDFIS 1206

Query: 1258 HLPKVGDYDAILVIVDRFSKYATFIPTPKLCSAELTAELFFKHIVKLWGIPSSIISDRDG 1317
              PKV    +I+V+VDRFSKY+ FI  P+LCS+E+ AELF+KH++K +G+P+ I+SDRD 
Sbjct: 1207 GFPKVDGKASIMVVVDRFSKYSVFIAAPELCSSEVAAELFYKHVIKYFGVPADIVSDRDT 1266

Query: 1318 RFIGTFWTELFAFLGTTLNISSSYHPQTDGQTERFNCLLEEYLRHFVDARQKNWIQLLDV 1377
            RF G FWT LF  +GT L  S++ HPQTDGQTER N LLEEYLRH+V A Q+NW++LLD 
Sbjct: 1267 RFTGRFWTALFNMMGTELKFSTANHPQTDGQTERINHLLEEYLRHYVTASQRNWVELLDT 1326

Query: 1378 AQFCFNCQTSSSTGKSPFEIVSGRQPALP-HIIDHPYAGKNPQAHNFTREWKQTTDIARA 1437
            AQFC+N   SS+T  SPFEIV G+QP  P  +      GK P A+   R+  +    A+ 
Sbjct: 1327 AQFCYNLHKSSATEMSPFEIVLGKQPMTPLDVAKSKNQGKCPAAYRVARDRLEMLSEAQD 1386

Query: 1438 YLEKASKHMKKWADKKRRPLQFRAGDQVLIKLKPE 1448
             L KA + MKK+AD+ RR ++F  GD+VL+KL P+
Sbjct: 1387 SLRKAQQRMKKYADQHRRSVEFSVGDKVLLKLTPQ 1387

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TF22_SCHPO1.9e-13433.17Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF212_SCHPO1.9e-13433.17Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF21_SCHPO1.9e-13433.17Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF23_SCHPO1.9e-13433.17Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF24_SCHPO1.9e-13433.17Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Match NameE-valueIdentityDescription
A5BX03_VITVI0.0e+0052.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1[more]
A5AUJ7_VITVI0.0e+0049.11Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040632 PE=4 SV=1[more]
Q9ZS84_SOLLC0.0e+0047.97Polyprotein OS=Solanum lycopersicum PE=4 SV=1[more]
A5AXU3_VITVI0.0e+0047.50Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031913 PE=4 SV=1[more]
A5B4X8_VITVI0.0e+0053.44Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020318 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00860.18.0e-2240.77ATMG00860.1 DNA/RNA polymerases superfamily protein[more]
Match NameE-valueIdentityDescription
gi|1009175511|ref|XP_015868924.1|0.0e+0060.04PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba][more]
gi|147826806|emb|CAN63950.1|0.0e+0052.62hypothetical protein VITISV_032357 [Vitis vinifera][more]
gi|1009176455|ref|XP_015869440.1|0.0e+0054.58PREDICTED: uncharacterized protein LOC107406761 [Ziziphus jujuba][more]
gi|147768682|emb|CAN76063.1|0.0e+0049.11hypothetical protein VITISV_040632 [Vitis vinifera][more]
gi|4235644|gb|AAD13304.1|0.0e+0047.97polyprotein [Solanum lycopersicum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
IPR001584Integrase_cat-core
IPR005162Retrotrans_gag_dom
IPR012337RNaseH-like_sf
IPR021109Peptidase_aspartic_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G001230.1CmaCh00G001230.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 712..870
score: 5.9
IPR000477Reverse transcriptase domainPROFILEPS50878RT_POLcoord: 692..871
score: 1
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 1221..1334
score: 4.2
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 1219..1378
score: 22
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 201..295
score: 3.9
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 1222..1383
score: 6.6
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 1216..1372
score: 4.1
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 464..564
score: 1.6
NoneNo IPR availableGENE3DG3DSA:3.10.10.10coord: 660..805
score: 4.3
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 704..1445
score: 3.3E
NoneNo IPR availablePANTHERPTHR24559:SF201SUBFAMILY NOT NAMEDcoord: 704..1445
score: 3.3E
NoneNo IPR availablePFAMPF13975gag-asp_proteascoord: 470..559
score: 3.
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 634..1064
score: 9.34E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh00G001230CmaCh12G007990Cucurbita maxima (Rimu)cmacmaB006
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G001230Cucurbita maxima (Rimu)cmacmaB004
CmaCh00G001230Cucurbita moschata (Rifu)cmacmoB000