CmaCh00G000980 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G000980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Location	Cma_Chr00 : 4658852 .. 4662162 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTAACTGAGGCTATTCAAAGAGGCACAGGTAAATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGTGAGAGAATCACCCGTTTGATCGAGTATGCTACAAATCAATCAATTTTGATCTCTGATTTGAGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTAAAAGAGTAATTTCTTGAACATTGATTGAATACGACAGTCCGTAGGGTTCCCAGGTGGCTGACGTTCGATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCACACTTTCGTTTCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTTCCAAAATTCATTCTTATTTGTGTGACGAACAAGTAGTTATTTAGTTTATAAGAATCAAAGTCAAAATTCGCAGAATGGATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCTTGATTAGTAATTAGGAAGCCCCTATTAAATAAAAGAGCAAATTCTTTCTTCTGCTAAATTAGGCGGGAATAAAATGAATGAATTTCATGCTCCCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAACAGCATAGAGTCTTGCATCTTTCTACATCTCTAAAGGATCTCTAGTTTGACTACGAGTCCCTGTTGTTGGATCGGATTGTAATGAACTTTTGGGTAACAAGTAGATATTACTTTGTGGAATTATATATGAATTAGTATAATTATCAGATACCTTTTATAAAAAGAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTATAAATATTAAGTCGAGGTATCCATTCTATGACAAACTTACTCTCTCTCTCCTTTTGTGCCTTTAGTAGGCATAGTATTTCCGGCAATTGCAATGGCTTCTTTATCTCTTCATGTTCAAAAAAACAAAATTATTTATGCTACACGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACGATAACACAGCTATCTATTTAGTAGACGGCAGTCTAACATGTGGCTGACTCCAAACATAAGCAATTATACATGCGTAAACATGATATCTGAGGAAATGAATTAGAAAGTCTTTGAAAATCTCCAATATATAACCGATCGGGCGATGAATGGTTGAGATGTCAAATCAATATATCTATACGGATGTAGGTATCCATAGGGAATCATATAAAGGTTATGTTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCGTCAGTCAAGATTCACATCAAAATAGTGCTAGTTGATTAGAGTTACTTTGGAAACAAAAAAAGTCAAATATGCACGTTATTCTATCAATTCAAATAAAATGCAATGAGATCTAGTATGAGTTGGCGATCAGAATGGATATGGATAGAATTTATAAGAAAGAGGATCTCAAAAGCAATTTCGGCTCGGCCTTTATCTATCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTTGATTTCCGTCTCAACAAAGAATTTCTTTGTTTTCCACGGGGGATCGTAATGTCTTTCTATGGGATTGCGTCTTTTTATTAGCTCCTATTTATGGTGCACCATTTTGTGGAATGTAGGCAGGGGTTATGATATGGAAAAGAAGAAATAGTGTCTATTTTGGGGGGTTTCCGGGACAAAATCCTAGAATCTTCCTTCGATTCCTTATGAAAGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGATATTTATACACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCCTTGACTCGTACCGATCAAAATTTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGCAAAAGGCTGCCGAATTGGTGGCCTATTTCTTGCGTGTACCAATTGAAGTTTCCTTGAGGAAGTTCAGAATGAATGCTTTCTTAGTTCGTAGCAAGAGGGATAAAACGAAAAAGAAAGAATAGTCTTTTTTATAGACCCTAGTATAACTTAACGAAAATTTCTGAAGAATGCTCATTCATTTGAGCCAAAGCAGACGTACAGGGAACAGACGGAAAACTGTCTTTCTTTGTCCGAAATTATGATGCGTATGTAACTCCACAGTAACAAAAGTGGATTCTTTGATATTTGCTTTCTGTATTATTTCGAAATTCAAGGATTAACTAATGAACACGGAATGGATTCATAATAGTATCCATATAACTTTACATAGAACTTATGTTTGATATAAATATTAGTAGTGTAGAGAGGTAACGAATGAAGTGAGTTCATTAATAAATCAAAGACGAATGGCAAACAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTCTTTTTGCCCGGGTGGATCTCTATTTAATAAAAGCCTAGAATCTTGGGTTACTCATTGGTGGAATACTGGTCAATCCGAAATGTTGTTGAATTAGATTCAAGAAAAGATTATTATAACAAAAGTGAGAGAATTAGAGGAACTCTTTCCCTTGGACGAAATGTTAAAGGAATACCCAGAAAGACATCTATCTACAAAAGCTTCGTATCAGAATCTACAAAGAAAGGAAAGGATCCATCCAATTGATCAAGATGCACAATGAACGAGGATCGTATCCATACGATTTTGCACTTCTCCACAAATAGAATCCGTTTCATTATTCTAAGTGGTTATTCTCTATTCTTGGTAATTAAGAACTTGTTATTCTTCACTCTTGGGTTCATGAGTTCCTATATAATTTAAGCGACACAATCAAATCCTTTTCTATTCTTTTATTAACTGATTTATGTATCGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

mRNA sequence

ATGGATGAAGACATGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

Coding sequence (CDS)

ATGGATGAAGACATGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

Protein sequence

MDEDMCVLLEEHACKKEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIAFAGFHSPHGWELIIGSVYKDFGFSHNDQILSSFVSTLSIILDTTNIGSLFKSSISVTCSD

Homology

[Close]

BLAST of CmaCh00G000980 vs. Swiss-Prot
Match: ACCD_MORIN (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica GN=accD PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-24
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FY+AILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 377 QEGSLSLMQMAKISSALYDYQSNKKLFYIAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 436

Query: 76  FAG 79
           FAG
Sbjct: 437 FAG 439

[Close]

BLAST of CmaCh00G000980 vs. Swiss-Prot
Match: ACCD_LACSA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lactuca sativa GN=accD PE=3 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 8.3e-24
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGSVSLMQM+K SSALYDYQSNK+ FYV ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 390 QEGSVSLMQMAKISSALYDYQSNKKLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIA 449

Query: 76  FAG 79
           FAG
Sbjct: 450 FAG 452

[Close]

BLAST of CmaCh00G000980 vs. Swiss-Prot
Match: ACCD_LIRTU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Liriodendron tulipifera GN=accD PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 370 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 429

Query: 76  FAG 79
           FAG
Sbjct: 430 FAG 432

[Close]

BLAST of CmaCh00G000980 vs. Swiss-Prot
Match: ACCD_COFAR (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Coffea arabica GN=accD PE=3 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 372 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 431

Query: 76  FAG 79
           FAG
Sbjct: 432 FAG 434

[Close]

BLAST of CmaCh00G000980 vs. Swiss-Prot
Match: ACCD_CITSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Citrus sinensis GN=accD PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 374 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 433

Query: 76  FAG 79
           FAG
Sbjct: 434 FAG 436

[Close]

BLAST of CmaCh00G000980 vs. TrEMBL
Match: A0A0Y0DYI1_CALIO (Acetyl-CoA carboxylase beta subunit (Fragment) OS=Calophyllum inophyllum GN=accD PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-22
Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 16 KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
          +EGS+SLMQM+K SSALYDYQSNK+FFYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 21 QEGSLSLMQMAKISSALYDYQSNKKFFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 80

Query: 76 FAG 79
          FAG
Sbjct: 81 FAG 83

[Close]

BLAST of CmaCh00G000980 vs. TrEMBL
Match: B0FFS3_TRIMO (AccD (Fragment) OS=Triticum monococcum GN=accD PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.4e-22
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16 KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
          +EGSVSLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 16 QEGSVSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 75

Query: 76 FAG 79
          FAG
Sbjct: 76 FAG 78

[Close]

BLAST of CmaCh00G000980 vs. TrEMBL
Match: A0A060D4Q6_9GENT (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Rhazya stricta GN=accD PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 394 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 453

Query: 76  FAG 79
           FAG
Sbjct: 454 FAG 456

[Close]

BLAST of CmaCh00G000980 vs. TrEMBL
Match: X2F1N7_LAGSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lagenaria siceraria GN=accD PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 368 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 427

Query: 76  FAG 79
           FAG
Sbjct: 428 FAG 430

[Close]

BLAST of CmaCh00G000980 vs. TrEMBL
Match: X2FAE1_LAGSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lagenaria siceraria GN=accD PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 5.4e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 368 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 427

Query: 76  FAG 79
           FAG
Sbjct: 428 FAG 430

[Close]

BLAST of CmaCh00G000980 vs. TAIR10
Match: ATCG00500.1 (ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta)

HSP 1 Score: 100.5 bits (249), Expect = 8.2e-22
Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SS L DYQS+K+ FY++ILTSPTTGGVTASFG+LGDIIIAEP AYIA
Sbjct: 370 QEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIA 429

Query: 76  FAG 79
           FAG
Sbjct: 430 FAG 432

[Close]

BLAST of CmaCh00G000980 vs. TAIR10
Match: ATCG00530.1 (ATCG00530.1 CemA-like proton extrusion protein-related)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 1


Query: 78  GFHSPHGWELIIGSVYKDFGFSHNDQILSSFVSTLSIILDT 119
           GFHSPHGWEL+IG +YKDFGF+H +QILS  VST  +ILDT
Sbjct: 163 GFHSPHGWELMIGYIYKDFGFAHYEQILSGLVSTFPVILDT 203

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: gi|983209427|gb|AMB26715.1| (acetyl-CoA carboxylase beta subunit, partial (chloroplast) [Calophyllum inophyllum])

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-22
Identity = 56/63 (88.89%), Postives = 62/63 (98.41%), Query Frame = 1


Query: 16 KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
          +EGS+SLMQM+K SSALYDYQSNK+FFYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 21 QEGSLSLMQMAKISSALYDYQSNKKFFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 80

Query: 76 FAG 79
          FAG
Sbjct: 81 FAG 83

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: gi|164453500|gb|ABY57509.1| (AccD, partial (chloroplast) [Triticum monococcum])

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-22
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16 KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
          +EGSVSLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 16 QEGSVSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 75

Query: 76 FAG 79
          FAG
Sbjct: 76 FAG 78

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: gi|657302869|ref|YP_009041096.1| (acetyl-CoA carboxylase beta subunit [Rhazya stricta])

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 394 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 453

Query: 76  FAG 79
           FAG
Sbjct: 454 FAG 456

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: gi|937547473|ref|YP_009170436.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Humulus lupulus])

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 376 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 435

Query: 76  FAG 79
           FAG
Sbjct: 436 FAG 438

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: gi|595647683|gb|AHM91105.1| (acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-22
Identity = 56/63 (88.89%), Postives = 61/63 (96.83%), Query Frame = 1


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 368 QEGSLSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 427

Query: 76  FAG 79
           FAG
Sbjct: 428 FAG 430

The following BLAST results are available for this feature:

BLAST of CmaCh00G000980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACCD_MORIN	6.3e-24	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_LACSA	8.3e-24	88.89	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_LIRTU	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_COFAR	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_CITSI	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G000980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0Y0DYI1_CALIO	2.4e-22	88.89	Acetyl-CoA carboxylase beta subunit (Fragment) OS=Calophyllum inophyllum GN=accD...	[more]
B0FFS3_TRIMO	2.4e-22	90.48	AccD (Fragment) OS=Triticum monococcum GN=accD PE=4 SV=1	[more]
A0A060D4Q6_9GENT	5.4e-22	88.89	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Rhazya strict...	[more]
X2F1N7_LAGSI	5.4e-22	88.89	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
X2FAE1_LAGSI	5.4e-22	88.89	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G000980 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00500.1	8.2e-22	79.37	ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]
ATCG00530.1	1.6e-12	73.17	ATCG00530.1 CemA-like proton extrusion protein-related	[more]

BLAST of CmaCh00G000980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|983209427\|gb\|AMB26715.1\|	3.5e-22	88.89	acetyl-CoA carboxylase beta subunit, partial (chloroplast) [Calophyllum inophyll...	[more]
gi\|164453500\|gb\|ABY57509.1\|	3.5e-22	90.48	AccD, partial (chloroplast) [Triticum monococcum]	[more]
gi\|657302869\|ref\|YP_009041096.1\|	7.8e-22	88.89	acetyl-CoA carboxylase beta subunit [Rhazya stricta]	[more]
gi\|937547473\|ref\|YP_009170436.1\|	7.8e-22	88.89	acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Humulus l...	[more]
gi\|595647683\|gb\|AHM91105.1\|	7.8e-22	88.89	acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000438	Acetyl_CoA_COase_Trfase_b_su
IPR004282	CemA

Vocabulary: **Molecular Function**
Term	Definition
GO:0003989	acetyl-CoA carboxylase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0009317	acetyl-CoA carboxylase complex
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G000980.1	CmaCh00G000980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	PRINTS	PR01070	ACCCTRFRASEB	coord: 47..64 score: 1.2E-12coord: 9..27 score: 1.2
IPR004282	Chloroplast envelope membrane protein, CemA	PFAM	PF03040	CemA	coord: 76..119 score: 3.4
None	No IPR available	PANTHER	PTHR22855	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	coord: 17..78 score: 2.7
None	No IPR available	PANTHER	PTHR22855:SF15	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 17..78 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh00G000980	CmoCh00G001030	Cucurbita moschata (Rifu)	cmacmoB000
CmaCh00G000980	CmoCh12G007300	Cucurbita moschata (Rifu)	cmacmoB003

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh00G000980	CmaCh12G007780	Cucurbita maxima (Rimu)	cmacmaB006

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh00G000980	Cucurbita maxima (Rimu)	cmacmaB002