Cla97C11G224530 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G224530
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	RNA helicase
Location	Cla97Chr11 : 30233973 .. 30234956 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCATCATATTATTACGTCAGTCATACTACTATTGAGCGTTTCAGTTTGTCTTTAACTGCTAAAACCAAGATGAAGGGTCTTTTGGAGATTCTGGCTTCAGCTTCCGAGTATGCGTTGCTTCCAATACGCCTAGGTGAAGAAGAGTTGATTCGTAGATTGATTAATCATCAACGATTTTCCTTCGAAAATCTGAAATATACAGACCCACATGTCAAAGCAAATGCTTTGCTGCAGGCGCATTTCTTGAGGCAATCCATTGGTGGTAACTTAGCATTGGATCAACGAGAGGTAGTCATTTCAGCCAGTAAGTTGCTGCAGGCAATGGTGGATGTCATTTCGAGCAATGGTTGGCTGAACCTTACCCTTCTTGCAATGGAAGTCAGCCAGATGGTAACCCAGGGCTTGTGGGAGCGGGATTCCATGCTTCTTCAGCTACCACATTTCACGAAGGAGCTGGCCAAGAGATTTCAAGAGAACCCTGGAAAGAACATCGAGACGGTATTCGACCTTGTGGAAATGGAAGATGAGGAAAGGCGTGAACTACTTCAAATGTCAGATTCTCAGTTGTTGGATATTGCATGCTTTTGCAATCGATTTCCAAATATTGATATGGCATATGAGGTATTAAATGGTGAGAATGTTGCAGCAGGGGAGAACATAACACTGCAAGTTACACTAGAGCGGGATCTTGATGGGAGGACCGAGGTTGGGCCTGTGGATGCTTTGAGGTATCCCAAAGCCAAAGAAGAAGGTTGGTGGCTTGTTGTTGGCGACACAAAGAGTAACCAGCTACTGGCGATTAAGAGGGTTTCTCTTCAAAGGAAGTTGAAGGTCAAGCTCGGTTTCACTGCGCCCCTAGATACTGGAAAGAAATCGTACACACTTTATTTCATGTGCAACTCGTACTTGGGTTGCGACCAGGAATATAGCTTCATGGTGGATGTCAAAGATGCAGCTGCATTTGGTGAAGAAGAGTAG

mRNA sequence

ATGATAGCATCATATTATTACGTCAGTCATACTACTATTGAGCGTTTCAGTTTGTCTTTAACTGCTAAAACCAAGATGAAGGGTCTTTTGGAGATTCTGGCTTCAGCTTCCGAGTATGCGTTGCTTCCAATACGCCTAGGTGAAGAAGAGTTGATTCGTAGATTGATTAATCATCAACGATTTTCCTTCGAAAATCTGAAATATACAGACCCACATGTCAAAGCAAATGCTTTGCTGCAGGCGCATTTCTTGAGGCAATCCATTGGTGGTAACTTAGCATTGGATCAACGAGAGGTAGTCATTTCAGCCAGTAAGTTGCTGCAGGCAATGGTGGATGTCATTTCGAGCAATGGTTGGCTGAACCTTACCCTTCTTGCAATGGAAGTCAGCCAGATGGTAACCCAGGGCTTGTGGGAGCGGGATTCCATGCTTCTTCAGCTACCACATTTCACGAAGGAGCTGGCCAAGAGATTTCAAGAGAACCCTGGAAAGAACATCGAGACGGTATTCGACCTTGTGGAAATGGAAGATGAGGAAAGGCGTGAACTACTTCAAATGTCAGATTCTCAGTTGTTGGATATTGCATGCTTTTGCAATCGATTTCCAAATATTGATATGGCATATGAGGTATTAAATGGTGAGAATGTTGCAGCAGGGGAGAACATAACACTGCAAGTTACACTAGAGCGGGATCTTGATGGGAGGACCGAGGTTGGGCCTGTGGATGCTTTGAGGTATCCCAAAGCCAAAGAAGAAGGTTGGTGGCTTGTTGTTGGCGACACAAAGAGTAACCAGCTACTGGCGATTAAGAGGGTTTCTCTTCAAAGGAAGTTGAAGGTCAAGCTCGGTTTCACTGCGCCCCTAGATACTGGAAAGAAATCGTACACACTTTATTTCATGTGCAACTCGTACTTGGGTTGCGACCAGGAATATAGCTTCATGGTGGATGTCAAAGATGCAGCTGCATTTGGTGAAGAAGAGTAG

Coding sequence (CDS)

ATGATAGCATCATATTATTACGTCAGTCATACTACTATTGAGCGTTTCAGTTTGTCTTTAACTGCTAAAACCAAGATGAAGGGTCTTTTGGAGATTCTGGCTTCAGCTTCCGAGTATGCGTTGCTTCCAATACGCCTAGGTGAAGAAGAGTTGATTCGTAGATTGATTAATCATCAACGATTTTCCTTCGAAAATCTGAAATATACAGACCCACATGTCAAAGCAAATGCTTTGCTGCAGGCGCATTTCTTGAGGCAATCCATTGGTGGTAACTTAGCATTGGATCAACGAGAGGTAGTCATTTCAGCCAGTAAGTTGCTGCAGGCAATGGTGGATGTCATTTCGAGCAATGGTTGGCTGAACCTTACCCTTCTTGCAATGGAAGTCAGCCAGATGGTAACCCAGGGCTTGTGGGAGCGGGATTCCATGCTTCTTCAGCTACCACATTTCACGAAGGAGCTGGCCAAGAGATTTCAAGAGAACCCTGGAAAGAACATCGAGACGGTATTCGACCTTGTGGAAATGGAAGATGAGGAAAGGCGTGAACTACTTCAAATGTCAGATTCTCAGTTGTTGGATATTGCATGCTTTTGCAATCGATTTCCAAATATTGATATGGCATATGAGGTATTAAATGGTGAGAATGTTGCAGCAGGGGAGAACATAACACTGCAAGTTACACTAGAGCGGGATCTTGATGGGAGGACCGAGGTTGGGCCTGTGGATGCTTTGAGGTATCCCAAAGCCAAAGAAGAAGGTTGGTGGCTTGTTGTTGGCGACACAAAGAGTAACCAGCTACTGGCGATTAAGAGGGTTTCTCTTCAAAGGAAGTTGAAGGTCAAGCTCGGTTTCACTGCGCCCCTAGATACTGGAAAGAAATCGTACACACTTTATTTCATGTGCAACTCGTACTTGGGTTGCGACCAGGAATATAGCTTCATGGTGGATGTCAAAGATGCAGCTGCATTTGGTGAAGAAGAGTAG

Protein sequence

MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQRFSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWLNLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEERRELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFMCNSYLGCDQEYSFMVDVKDAAAFGEEE

Homology

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BLAST of Cla97C11G224530 vs. NCBI nr
Match: XP_022157162.1 (DExH-box ATP-dependent RNA helicase DExH12 [Momordica charantia])

HSP 1 Score: 587.8 bits (1514), Expect = 2.3e-164
Identity = 303/326 (92.94%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLTAKTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1850 MIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1909

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQSIGGNL LDQR+VVISAS+LLQAMVDVISSNGWL
Sbjct: 1910 FSFENPKCTDPHVKANALLQAHFSRQSIGGNLTLDQRQVVISASRLLQAMVDVISSNGWL 1969

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QENPGKNIETVFDLVEMEDEER
Sbjct: 1970 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENPGKNIETVFDLVEMEDEER 2029

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQMSDSQLLDIA FCNRFPNIDMAYEVL+GENVAAGENITLQVTLERDLDGRTEVGP
Sbjct: 2030 RELLQMSDSQLLDIARFCNRFPNIDMAYEVLDGENVAAGENITLQVTLERDLDGRTEVGP 2089

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2090 VDASRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDFTAPPDTGKKSYTLYFM 2149

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEE 327
            C+SYLGCDQEYSF VDVKDAAAF E+
Sbjct: 2150 CDSYLGCDQEYSFTVDVKDAAAFDED 2175

[Close]

BLAST of Cla97C11G224530 vs. NCBI nr
Match: XP_004147618.1 (PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cucumis sativus] >KGN57184.1 hypothetical protein Csa_3G168950 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 1.1e-163
Identity = 300/327 (91.74%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLTAKTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1849 MIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1908

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQA+F RQS+GGNLALDQREVVISAS+LLQAMVDVISSNGWL
Sbjct: 1909 FSFENPKCTDPHVKANALLQAYFSRQSVGGNLALDQREVVISASRLLQAMVDVISSNGWL 1968

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QEN GKNIET+FDLVEMED ER
Sbjct: 1969 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENSGKNIETIFDLVEMEDNER 2028

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
             ELLQMSDSQLLDIA FCNRFPNIDMAYEVL+GENVAAGEN+TLQVTLERDLDGRTEVGP
Sbjct: 2029 HELLQMSDSQLLDIARFCNRFPNIDMAYEVLDGENVAAGENVTLQVTLERDLDGRTEVGP 2088

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2089 VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFM 2148

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEEE 328
            C+SYLGCDQEYSF VDVKDAAAF E+E
Sbjct: 2149 CDSYLGCDQEYSFTVDVKDAAAFDEDE 2175

[Close]

BLAST of Cla97C11G224530 vs. NCBI nr
Match: XP_022941079.1 (DExH-box ATP-dependent RNA helicase DExH12-like [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 6.4e-159
Identity = 292/320 (91.25%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1851 MIASYYYISYTTIERFSSSLTGKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1910

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQS+GGNLA+DQREVVISAS+LLQAMVDVISSNGWL
Sbjct: 1911 FSFENPKCTDPHVKANALLQAHFSRQSVGGNLAIDQREVVISASRLLQAMVDVISSNGWL 1970

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QENPGKNIETVFDL EMEDEER
Sbjct: 1971 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENPGKNIETVFDLAEMEDEER 2030

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQM+D QL DIA FCNRFPNID+AYEVL+GENVAAGENITLQV LERDLDGRTEVGP
Sbjct: 2031 RELLQMTDVQLSDIARFCNRFPNIDLAYEVLDGENVAAGENITLQVALERDLDGRTEVGP 2090

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2091 VDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDFTAPPDTGKKSYTLYFM 2150

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
            C+SYLGCDQEYSF VDVKDA
Sbjct: 2151 CDSYLGCDQEYSFSVDVKDA 2170

[Close]

BLAST of Cla97C11G224530 vs. NCBI nr
Match: XP_022982013.1 (DExH-box ATP-dependent RNA helicase DExH12-like [Cucurbita maxima])

HSP 1 Score: 569.7 bits (1467), Expect = 6.4e-159
Identity = 292/320 (91.25%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1851 MIASYYYISYTTIERFSSSLTGKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1910

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQS+GGNLA+DQREVVISAS+LLQAMVDVISSNGWL
Sbjct: 1911 FSFENPKCTDPHVKANALLQAHFSRQSVGGNLAIDQREVVISASRLLQAMVDVISSNGWL 1970

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QENPGKNIETVFDL EMEDEER
Sbjct: 1971 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENPGKNIETVFDLAEMEDEER 2030

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQM+D QL DIA FCNRFPNID+AYEVL+GENVAAGENITLQV LERDLDGRTEVGP
Sbjct: 2031 RELLQMTDVQLSDIARFCNRFPNIDLAYEVLDGENVAAGENITLQVALERDLDGRTEVGP 2090

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2091 VDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDFTAPPDTGKKSYTLYFM 2150

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
            C+SYLGCDQEYSF VDVKDA
Sbjct: 2151 CDSYLGCDQEYSFSVDVKDA 2170

[Close]

BLAST of Cla97C11G224530 vs. NCBI nr
Match: XP_023525590.1 (DExH-box ATP-dependent RNA helicase DExH12-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 569.7 bits (1467), Expect = 6.4e-159
Identity = 292/320 (91.25%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1851 MIASYYYISYTTIERFSSSLTGKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1910

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQS+GGNLA+DQREVVISAS+LLQAMVDVISSNGWL
Sbjct: 1911 FSFENPKCTDPHVKANALLQAHFSRQSVGGNLAIDQREVVISASRLLQAMVDVISSNGWL 1970

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QENPGKNIETVFDL EMEDEER
Sbjct: 1971 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENPGKNIETVFDLAEMEDEER 2030

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQM+D QL DIA FCNRFPNID+AYEVL+GENVAAGENITLQV LERDLDGRTEVGP
Sbjct: 2031 RELLQMTDVQLSDIARFCNRFPNIDLAYEVLDGENVAAGENITLQVALERDLDGRTEVGP 2090

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2091 VDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLDFTAPPDTGKKSYTLYFM 2150

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
            C+SYLGCDQEYSF VDVKDA
Sbjct: 2151 CDSYLGCDQEYSFSVDVKDA 2170

[Close]

BLAST of Cla97C11G224530 vs. TrEMBL
Match: tr|A0A0A0L839|A0A0A0L839_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168950 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 7.5e-164
Identity = 300/327 (91.74%), Postives = 311/327 (95.11%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLTAKTKMKGLLEILASASEYALLPIR GEEELIRRLINHQR
Sbjct: 1849 MIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEYALLPIRPGEEELIRRLINHQR 1908

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQA+F RQS+GGNLALDQREVVISAS+LLQAMVDVISSNGWL
Sbjct: 1909 FSFENPKCTDPHVKANALLQAYFSRQSVGGNLALDQREVVISASRLLQAMVDVISSNGWL 1968

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKR QEN GKNIET+FDLVEMED ER
Sbjct: 1969 SLALLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRCQENSGKNIETIFDLVEMEDNER 2028

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
             ELLQMSDSQLLDIA FCNRFPNIDMAYEVL+GENVAAGEN+TLQVTLERDLDGRTEVGP
Sbjct: 2029 HELLQMSDSQLLDIARFCNRFPNIDMAYEVLDGENVAAGENVTLQVTLERDLDGRTEVGP 2088

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL FTAP DTGKKSYTLYFM
Sbjct: 2089 VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFM 2148

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEEE 328
            C+SYLGCDQEYSF VDVKDAAAF E+E
Sbjct: 2149 CDSYLGCDQEYSFTVDVKDAAAFDEDE 2175

[Close]

BLAST of Cla97C11G224530 vs. TrEMBL
Match: tr|A0A2N9EI12|A0A2N9EI12_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2295 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 279/326 (85.58%), Postives = 302/326 (92.64%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT+KTKMKGLLEILASA+EYALLPIR GEEE++RRLINHQR
Sbjct: 1839 MIASYYYISYTTIERFSSSLTSKTKMKGLLEILASATEYALLPIRPGEEEVVRRLINHQR 1898

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQ++GGNLA DQREV++SAS+LLQAMVDVISSNGWL
Sbjct: 1899 FSFENPKCTDPHVKANALLQAHFARQTVGGNLASDQREVLLSASRLLQAMVDVISSNGWL 1958

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQG+WERDSMLLQLPHFTKELAKR QENPGKN+ETVFDLVEMED+ER
Sbjct: 1959 SLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKRCQENPGKNVETVFDLVEMEDDER 2018

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQMSD QLLDIA FCNRFPNIDM YEVL  +NV AGE+ITLQVTLERDL+GRTEVGP
Sbjct: 2019 RELLQMSDQQLLDIAQFCNRFPNIDMTYEVLENDNVRAGEDITLQVTLERDLEGRTEVGP 2078

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL F AP D GKK YTLYFM
Sbjct: 2079 VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKAKVKLEFAAPADAGKKPYTLYFM 2138

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEE 327
            C+SYLGCDQEY+F VD+K+AA   E+
Sbjct: 2139 CDSYLGCDQEYNFNVDIKEAAGPDED 2164

[Close]

BLAST of Cla97C11G224530 vs. TrEMBL
Match: tr|B9IFA9|B9IFA9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G095500v3 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.5e-151
Identity = 273/326 (83.74%), Postives = 301/326 (92.33%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KTKMKGLLEIL+SASEYA LPIR GEEE++RRLINHQR
Sbjct: 1828 MIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYAQLPIRPGEEEVLRRLINHQR 1887

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN +Y DPHVKAN LLQAHF RQS+GGNLALDQREV++S S+LLQAMVDVISSNGWL
Sbjct: 1888 FSFENPRYADPHVKANVLLQAHFSRQSVGGNLALDQREVLLSGSRLLQAMVDVISSNGWL 1947

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQG+WERDSMLLQLPHFTK++AKR QENPGK+IETVFDLVEMED+ER
Sbjct: 1948 SLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDMAKRCQENPGKSIETVFDLVEMEDDER 2007

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQMSDSQLLDI  FCNRFPNIDM+YEV++G+NV AGE+ITL VTLERDL+GRTEVGP
Sbjct: 2008 RELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVGP 2067

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VD+ RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL F AP DTG+KSYTLYFM
Sbjct: 2068 VDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFM 2127

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEE 327
            C+SYLGCDQEY+F VDV +AA   E+
Sbjct: 2128 CDSYLGCDQEYNFSVDVGEAAGPDED 2153

[Close]

BLAST of Cla97C11G224530 vs. TrEMBL
Match: tr|A0A2K1XKL2|A0A2K1XKL2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G095500v3 PE=4 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.5e-151
Identity = 273/326 (83.74%), Postives = 301/326 (92.33%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KTKMKGLLEIL+SASEYA LPIR GEEE++RRLINHQR
Sbjct: 1855 MIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSASEYAQLPIRPGEEEVLRRLINHQR 1914

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN +Y DPHVKAN LLQAHF RQS+GGNLALDQREV++S S+LLQAMVDVISSNGWL
Sbjct: 1915 FSFENPRYADPHVKANVLLQAHFSRQSVGGNLALDQREVLLSGSRLLQAMVDVISSNGWL 1974

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQG+WERDSMLLQLPHFTK++AKR QENPGK+IETVFDLVEMED+ER
Sbjct: 1975 SLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDMAKRCQENPGKSIETVFDLVEMEDDER 2034

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQMSDSQLLDI  FCNRFPNIDM+YEV++G+NV AGE+ITL VTLERDL+GRTEVGP
Sbjct: 2035 RELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVGP 2094

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VD+ RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL F AP DTG+KSYTLYFM
Sbjct: 2095 VDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFM 2154

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEE 327
            C+SYLGCDQEY+F VDV +AA   E+
Sbjct: 2155 CDSYLGCDQEYNFSVDVGEAAGPDED 2180

[Close]

BLAST of Cla97C11G224530 vs. TrEMBL
Match: tr|A0A251IP50|A0A251IP50_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G000900 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 5.5e-151
Identity = 271/326 (83.13%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS SLT KT+MKGLLEILASASEYALLP+R GEEE++RRLINHQR
Sbjct: 1323 MIASYYYISYTTIERFSSSLTPKTRMKGLLEILASASEYALLPVRPGEEEVLRRLINHQR 1382

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN +Y DPHVKAN LLQAHF RQS+GGNLALDQREV++SAS+LLQAMVDVISSNGWL
Sbjct: 1383 FSFENSRYADPHVKANVLLQAHFSRQSVGGNLALDQREVLLSASRLLQAMVDVISSNGWL 1442

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +L LLAMEVSQMVTQG+WERDSMLLQLPHFTKELAK+ QENPGK+IETVFDLVEMED+ER
Sbjct: 1443 SLALLAMEVSQMVTQGMWERDSMLLQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDER 1502

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            RELLQMSDSQLLDI  FCNRFPNIDM+YEV++GE+V AGE+ITL VTLERDL+GRT+VG 
Sbjct: 1503 RELLQMSDSQLLDIVRFCNRFPNIDMSYEVMDGEHVKAGEDITLLVTLERDLEGRTDVGT 1562

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            +DA RYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRK KVKL F AP + G+KSYTLYFM
Sbjct: 1563 IDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPSEAGRKSYTLYFM 1622

Query: 301  CNSYLGCDQEYSFMVDVKDAAAFGEE 327
            C+SYLGCDQEY F VDVK+A    E+
Sbjct: 1623 CDSYLGCDQEYGFSVDVKEAGGSDED 1648

[Close]

BLAST of Cla97C11G224530 vs. Swiss-Prot
Match: sp|Q9SYP1|DEXHC_ARATH (DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana OX=3702 GN=BRR2A PE=1 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 4.1e-149
Identity = 261/322 (81.06%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS  L++KTKMKGLLEIL SASEY ++PIR GEE+ +RRLINHQR
Sbjct: 1844 MIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQR 1903

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQ+IGGNLA+DQR+V++SA++LLQAMVDVISSNGWL
Sbjct: 1904 FSFENPKCTDPHVKANALLQAHFSRQNIGGNLAMDQRDVLLSATRLLQAMVDVISSNGWL 1963

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            NL LLAMEVSQMVTQG+WERDSMLLQLPHFTK+LAKR QENPGKNIETVFDLVEMEDEER
Sbjct: 1964 NLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETVFDLVEMEDEER 2023

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            +ELL+MSD+QLLDIA FCNRFPNID+ YE++  E V  G+ +TLQV LERD++GRTEVGP
Sbjct: 2024 QELLKMSDAQLLDIARFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGP 2083

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VD+LRYPK KEEGWWLVVGDTK+NQLLAIKRVSLQRK+KVKL FTAP + G+KSYTLYFM
Sbjct: 2084 VDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFM 2143

Query: 301  CNSYLGCDQEYSFMVDVKDAAA 323
            C+SYLGCDQEYSF VDVK + A
Sbjct: 2144 CDSYLGCDQEYSFSVDVKGSGA 2165

[Close]

BLAST of Cla97C11G224530 vs. Swiss-Prot
Match: sp|O48534|DEXHD_ARATH (DExH-box ATP-dependent RNA helicase DExH13 OS=Arabidopsis thaliana OX=3702 GN=BRR2B PE=2 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 1.5e-138
Identity = 243/322 (75.47%), Postives = 283/322 (87.89%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+++TTIERFS  L +KTKMKGLLEIL SASEY L+PIR GEE+ +RRLINHQR
Sbjct: 1845 MIASYYYINYTTIERFSSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQR 1904

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSF+N + TDP VK +ALLQAHF RQ I GNL +DQ EV++SA++LLQAMVDVISSNG L
Sbjct: 1905 FSFQNPRCTDPRVKTSALLQAHFSRQKISGNLVMDQCEVLLSATRLLQAMVDVISSNGCL 1964

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            NL LLAMEVSQMVTQG+W+RDSMLLQLPHFTK+LAKR  ENPG NIET+FDLVEMED++R
Sbjct: 1965 NLALLAMEVSQMVTQGMWDRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDLVEMEDDKR 2024

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            +ELLQMSD+QLLDIA FCNRFPNID+ YE++    V+ G++ITLQV LERD++GRTEVGP
Sbjct: 2025 QELLQMSDAQLLDIARFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGP 2084

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPK KEEGWWLVVG+ K+NQL+AIKR+SLQRK +VKL F  P +TG+KSYTLYFM
Sbjct: 2085 VDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFM 2144

Query: 301  CNSYLGCDQEYSFMVDVKDAAA 323
            C+SYLGCDQEYSF VDVKD+ A
Sbjct: 2145 CDSYLGCDQEYSFTVDVKDSDA 2166

[Close]

BLAST of Cla97C11G224530 vs. Swiss-Prot
Match: sp|O75643|U520_HUMAN (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 3.2e-93
Identity = 170/320 (53.12%), Postives = 235/320 (73.44%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIA+YYY+++TTIE FS+SL AKTK++GL+EI+++A+EY  +PIR  E+ L+R+L     
Sbjct: 1817 MIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVP 1876

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
                N K+ DPHVK N LLQAH  R  +   L  D  E++  A +L+QA VDV+SSNGWL
Sbjct: 1877 HKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWL 1936

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +  L AME++QMVTQ +W +DS L QLPHFT E  KR  +   K +E+VFD++EMEDEER
Sbjct: 1937 SPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTD---KGVESVFDIMEMEDEER 1996

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
              LLQ++DSQ+ D+A FCNR+PNI+++YEV++ +++ +G  + + V LER+       GP
Sbjct: 1997 NALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLERE---EEVTGP 2056

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            V A  +P+ +EEGWW+V+GD KSN L++IKR++LQ+K KVKL F AP  TG  +YTLYFM
Sbjct: 2057 VIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPA-TGAHNYTLYFM 2116

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
             ++Y+GCDQEY F VDVK+A
Sbjct: 2117 SDAYMGCDQEYKFSVDVKEA 2129

[Close]

BLAST of Cla97C11G224530 vs. Swiss-Prot
Match: sp|Q6P4T2|U520_MOUSE (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.2e-93
Identity = 170/320 (53.12%), Postives = 235/320 (73.44%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIA+YYY+++TTIE FS+SL AKTK++GL+EI+++A+EY  +PIR  E+ L+R+L     
Sbjct: 1817 MIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVP 1876

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
                N K+ DPHVK N LLQAH  R  +   L  D  E++  A +L+QA VDV+SSNGWL
Sbjct: 1877 HKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWL 1936

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +  L AME++QMVTQ +W +DS L QLPHFT E  KR  +   K +E+VFD++EMEDEER
Sbjct: 1937 SPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTD---KGVESVFDIMEMEDEER 1996

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
              LLQ++DSQ+ D+A FCNR+PNI+++YEV++ +++ +G  + + V LER+       GP
Sbjct: 1997 NALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLERE---EEVTGP 2056

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            V A  +P+ +EEGWW+V+GD KSN L++IKR++LQ+K KVKL F AP  TG  +YTLYFM
Sbjct: 2057 VIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPA-TGGHNYTLYFM 2116

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
             ++Y+GCDQEY F VDVK+A
Sbjct: 2117 SDAYMGCDQEYKFSVDVKEA 2129

[Close]

BLAST of Cla97C11G224530 vs. Swiss-Prot
Match: sp|F1LNJ2|U520_RAT (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 4.2e-93
Identity = 170/320 (53.12%), Postives = 235/320 (73.44%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIA+YYY+++TTIE FS+SL AKTK++GL+EI+++A+EY  +PIR  E+ L+R+L     
Sbjct: 1820 MIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVP 1879

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
                N K+ DPHVK N LLQAH  R  +   L  D  E++  A +L+QA VDV+SSNGWL
Sbjct: 1880 HKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWL 1939

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            +  L AME++QMVTQ +W +DS L QLPHFT E  KR  +   K +E+VFD++EMEDEER
Sbjct: 1940 SPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTD---KGVESVFDIMEMEDEER 1999

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
              LLQ++DSQ+ D+A FCNR+PNI+++YEV++ +++ +G  + + V LER+       GP
Sbjct: 2000 NALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLERE---EEVTGP 2059

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            V A  +P+ +EEGWW+V+GD KSN L++IKR++LQ+K KVKL F AP  TG  +YTLYFM
Sbjct: 2060 VIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPA-TGGHNYTLYFM 2119

Query: 301  CNSYLGCDQEYSFMVDVKDA 321
             ++Y+GCDQEY F VDVK+A
Sbjct: 2120 SDAYMGCDQEYKFSVDVKEA 2132

[Close]

BLAST of Cla97C11G224530 vs. TAIR10
Match: AT1G20960.1 (U5 small nuclear ribonucleoprotein helicase, putative)

HSP 1 Score: 528.9 bits (1361), Expect = 2.3e-150
Identity = 261/322 (81.06%), Postives = 295/322 (91.61%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+S+TTIERFS  L++KTKMKGLLEIL SASEY ++PIR GEE+ +RRLINHQR
Sbjct: 1844 MIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQR 1903

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSFEN K TDPHVKANALLQAHF RQ+IGGNLA+DQR+V++SA++LLQAMVDVISSNGWL
Sbjct: 1904 FSFENPKCTDPHVKANALLQAHFSRQNIGGNLAMDQRDVLLSATRLLQAMVDVISSNGWL 1963

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            NL LLAMEVSQMVTQG+WERDSMLLQLPHFTK+LAKR QENPGKNIETVFDLVEMEDEER
Sbjct: 1964 NLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQENPGKNIETVFDLVEMEDEER 2023

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            +ELL+MSD+QLLDIA FCNRFPNID+ YE++  E V  G+ +TLQV LERD++GRTEVGP
Sbjct: 2024 QELLKMSDAQLLDIARFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGP 2083

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VD+LRYPK KEEGWWLVVGDTK+NQLLAIKRVSLQRK+KVKL FTAP + G+KSYTLYFM
Sbjct: 2084 VDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFM 2143

Query: 301  CNSYLGCDQEYSFMVDVKDAAA 323
            C+SYLGCDQEYSF VDVK + A
Sbjct: 2144 CDSYLGCDQEYSFSVDVKGSGA 2165

[Close]

BLAST of Cla97C11G224530 vs. TAIR10
Match: AT2G42270.1 (U5 small nuclear ribonucleoprotein helicase)

HSP 1 Score: 493.8 bits (1270), Expect = 8.1e-140
Identity = 243/322 (75.47%), Postives = 283/322 (87.89%), Query Frame = 0


Query: 1    MIASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQR 60
            MIASYYY+++TTIERFS  L +KTKMKGLLEIL SASEY L+PIR GEE+ +RRLINHQR
Sbjct: 1845 MIASYYYINYTTIERFSSLLASKTKMKGLLEILTSASEYDLIPIRPGEEDAVRRLINHQR 1904

Query: 61   FSFENLKYTDPHVKANALLQAHFLRQSIGGNLALDQREVVISASKLLQAMVDVISSNGWL 120
            FSF+N + TDP VK +ALLQAHF RQ I GNL +DQ EV++SA++LLQAMVDVISSNG L
Sbjct: 1905 FSFQNPRCTDPRVKTSALLQAHFSRQKISGNLVMDQCEVLLSATRLLQAMVDVISSNGCL 1964

Query: 121  NLTLLAMEVSQMVTQGLWERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEER 180
            NL LLAMEVSQMVTQG+W+RDSMLLQLPHFTK+LAKR  ENPG NIET+FDLVEMED++R
Sbjct: 1965 NLALLAMEVSQMVTQGMWDRDSMLLQLPHFTKDLAKRCHENPGNNIETIFDLVEMEDDKR 2024

Query: 181  RELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVGP 240
            +ELLQMSD+QLLDIA FCNRFPNID+ YE++    V+ G++ITLQV LERD++GRTEVGP
Sbjct: 2025 QELLQMSDAQLLDIARFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGP 2084

Query: 241  VDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYFM 300
            VDA RYPK KEEGWWLVVG+ K+NQL+AIKR+SLQRK +VKL F  P +TG+KSYTLYFM
Sbjct: 2085 VDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFM 2144

Query: 301  CNSYLGCDQEYSFMVDVKDAAA 323
            C+SYLGCDQEYSF VDVKD+ A
Sbjct: 2145 CDSYLGCDQEYSFTVDVKDSDA 2166

[Close]

BLAST of Cla97C11G224530 vs. TAIR10
Match: AT5G61140.2 (U5 small nuclear ribonucleoprotein helicase)

HSP 1 Score: 159.1 bits (401), Expect = 4.7e-39
Identity = 102/313 (32.59%), Postives = 167/313 (53.35%), Query Frame = 0


Query: 2    IASYYYVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRLINHQRF 61
            IAS YY+ + T+  F  ++   T ++  L ILA ASEY  LP+R  EE   + L +  R+
Sbjct: 1845 IASQYYLCYMTVSMFGSNIGPDTSLEAFLHILAGASEYDELPVRHNEENYNKTLSDRVRY 1904

Query: 62   SFENLKYTDPHVKANALLQAHFLRQSIG-GNLALDQREVVISASKLLQAMVDVISSNGWL 121
              +N    DPHVKAN L QAHF + ++   +   D + V+  + ++LQAM+D+ +++GWL
Sbjct: 1905 PVDNNHLDDPHVKANLLFQAHFSQLALPISDYNTDLKSVLDQSIRILQAMIDICANSGWL 1964

Query: 122  NLTLLAMEVSQMVTQGLW-ERDSMLLQLPHFTKELAKRFQENPGKNIETVFDLVEMEDEE 181
            + +L  M + QMV QG+W ++DS L  +P     L         + I T+  L+ +  E 
Sbjct: 1965 SSSLTCMRLLQMVMQGMWSDQDSSLWMIPCMNDLLLGSL---TARGIHTLHQLLNLPRET 2024

Query: 182  RRELLQMSDSQLLDIACFCNRFPNIDMAYEVLNGENVAAGENITLQVTLERDLDGRTEVG 241
             + + +   +  L  +    RFP I M   +   ++    +  TL++ LE+    +    
Sbjct: 2025 LQSVTENFPASRL--SQDLQRFPRIQMNVRLQKKDSDGKKKPSTLEIRLEK--TSKRNSS 2084

Query: 242  PVDALRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKLKVKLGFTAPLDTGKKSYTLYF 301
               A R+PK K+E WWLV+GDT +++L A+KRVS   +L  ++    P  T  +   L  
Sbjct: 2085 RALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMEL-PPNITSFQDTKLIL 2144

Query: 302  MCNSYLGCDQEYS 313
            + + YLG +QE+S
Sbjct: 2145 VSDCYLGFEQEHS 2149

[Close]

BLAST of Cla97C11G224530 vs. TAIR10
Match: AT1G79940.1 (DnaJ / Sec63 Brl domains-containing protein)

HSP 1 Score: 87.0 bits (214), Expect = 2.3e-17
Identity = 84/306 (27.45%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 7   YVSHTTIERFSLSLTAKTKMKGLLEILASASEYALLPIRLGEEELIRRL---------IN 66
           YV H T+  +   +        ++E+   A+EY  +P+R  ++E +++L         ++
Sbjct: 223 YVMHQTLSAYYYLMKPSLAPSKVMEVFTKAAEYMEIPVRRTDDEPLQKLFMSVRSELNLD 282

Query: 67  HQRFSFENLKYTDPH---VKANALLQAHFLRQS--IGGNLALDQREVVISASKLLQAMVD 126
            +    E  K+   H   VK   L+QA   R+S  +   L  D R V+  A +LL+ ++ 
Sbjct: 283 LKNMKQEQAKFWKQHPAIVKTELLIQAQLTRESGVLSPALQGDFRRVLELAPRLLEELLK 342

Query: 127 V------ISSNGWLNLTLLAMEVSQMVTQGL-----------WERDSMLLQLPHFTKELA 186
           +         +GWL   +  +E+SQ + Q +            E  S  LQLPHF+  + 
Sbjct: 343 MAVIPRTAQGHGWLRPAVGVVELSQCIVQAVPLSARKSSGVSSEGISPFLQLPHFSDAVV 402

Query: 187 KRFQENPGKNIETVFDLVEMEDEERRELLQ----MSDSQLLDIACFCNRFPNI--DMAYE 246
           K+      K +++  DL EM  E+R ELL     +S + + DI       P+I  D+  E
Sbjct: 403 KKIAR---KKVKSFQDLQEMRLEDRSELLTQVAGLSATDVEDIEKVLEMMPSITVDITCE 462

Query: 247 VLNGENVAAGENITLQ--VTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSNQLL 274
               E +  G+ +TLQ  VTL+R  +G     P  A  +P  KEE +W+++ D+ SN + 
Sbjct: 463 TEGEEGIQEGDIVTLQAWVTLKRP-NGLVGALP-HAPYFPFHKEENYWVLLADSVSNNVW 522

[Close]

BLAST of Cla97C11G224530 vs. TAIR10
Match: AT3G28870.1 (Histone deacetylase interacting (InterPro:IPR013194), Sec63 domain (InterPro:IPR004179))

HSP 1 Score: 71.6 bits (174), Expect = 9.9e-13
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 270 KRVSLQRKLKVKLGFTAPLDTGKKSYTLYFMCNSYLGCDQEYSFMVDVK 319
           K +  + K KVKL FT P + G+KSYTLYFMC+SYLGCDQEYSF VD K
Sbjct: 297 KGLGQELKAKVKLDFTVPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDDK 345

The following BLAST results are available for this feature:

BLAST of Cla97C11G224530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157162.1	2.3e-164	92.94	DExH-box ATP-dependent RNA helicase DExH12 [Momordica charantia]	[more]
XP_004147618.1	1.1e-163	91.74	PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cucumis sativus]...	[more]
XP_022941079.1	6.4e-159	91.25	DExH-box ATP-dependent RNA helicase DExH12-like [Cucurbita moschata]	[more]
XP_022982013.1	6.4e-159	91.25	DExH-box ATP-dependent RNA helicase DExH12-like [Cucurbita maxima]	[more]
XP_023525590.1	6.4e-159	91.25	DExH-box ATP-dependent RNA helicase DExH12-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Cla97C11G224530 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L839\|A0A0A0L839_CUCSA	7.5e-164	91.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G168950 PE=4 SV=1	[more]
tr\|A0A2N9EI12\|A0A2N9EI12_FAGSY	1.1e-154	85.58	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2295 PE=4 SV=1	[more]
tr\|B9IFA9\|B9IFA9_POPTR	1.5e-151	83.74	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G095500v3 PE=...	[more]
tr\|A0A2K1XKL2\|A0A2K1XKL2_POPTR	1.5e-151	83.74	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G095500v3 PE=...	[more]
tr\|A0A251IP50\|A0A251IP50_MANES	5.5e-151	83.13	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G000900 PE=4 SV=...	[more]

BLAST of Cla97C11G224530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SYP1\|DEXHC_ARATH	4.1e-149	81.06	DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
sp\|O48534\|DEXHD_ARATH	1.5e-138	75.47	DExH-box ATP-dependent RNA helicase DExH13 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
sp\|O75643\|U520_HUMAN	3.2e-93	53.13	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=S...	[more]
sp\|Q6P4T2\|U520_MOUSE	4.2e-93	53.13	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=...	[more]
sp\|F1LNJ2\|U520_RAT	4.2e-93	53.13	U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=1011...	[more]

BLAST of Cla97C11G224530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20960.1	2.3e-150	81.06	U5 small nuclear ribonucleoprotein helicase, putative	[more]
AT2G42270.1	8.1e-140	75.47	U5 small nuclear ribonucleoprotein helicase	[more]
AT5G61140.2	4.7e-39	32.59	U5 small nuclear ribonucleoprotein helicase	[more]
AT1G79940.1	2.3e-17	27.45	DnaJ / Sec63 Brl domains-containing protein	[more]
AT3G28870.1	9.9e-13	67.35	Histone deacetylase interacting (InterPro:IPR013194), Sec63 domain (InterPro:IPR...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014756	Ig_E-set
IPR035892	C2_domain_sf
IPR004179	Sec63-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006401	RNA catabolic process
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0003724	RNA helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G224530.1	Cla97C11G224530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004179	Sec63 domain	SMART	SM00973	Sec63_2	coord: 1..315 e-value: 5.3E-93 score: 325.0
IPR004179	Sec63 domain	PFAM	PF02889	Sec63	coord: 1..313 e-value: 6.5E-68 score: 228.6
None	No IPR available	GENE3D	G3DSA:1.10.3380.10		coord: 1..140 e-value: 1.7E-45 score: 156.5
None	No IPR available	GENE3D	G3DSA:1.10.150.20		coord: 141..201 e-value: 2.7E-26 score: 92.9
None	No IPR available	PANTHER	PTHR24075:SF5	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 200 KDA HELICASE	coord: 1..322
None	No IPR available	PANTHER	PTHR24075	FAMILY NOT NAMED	coord: 1..322
None	No IPR available	SUPERFAMILY	SSF158702	Sec63 N-terminal domain-like	coord: 25..202
IPR035892	C2 domain superfamily	GENE3D	G3DSA:2.60.40.150		coord: 202..327 e-value: 5.2E-43 score: 147.6
IPR014756	Immunoglobulin E-set	SUPERFAMILY	SSF81296	E set domains	coord: 203..319

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G224530	Cla023418	Watermelon (97103) v1	wmwmbB358
Cla97C11G224530	Bhi09G001701	Wax gourd	wgowmbB562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G224530	Watermelon (97103) v2	wmbwmbB068
Cla97C11G224530	Silver-seed gourd	carwmbB0998
Cla97C11G224530	Silver-seed gourd	carwmbB0321
Cla97C11G224530	Silver-seed gourd	carwmbB0945
Cla97C11G224530	Cucumber (Gy14) v2	cgybwmbB024
Cla97C11G224530	Cucumber (Gy14) v2	cgybwmbB185
Cla97C11G224530	Cucumber (Gy14) v1	cgywmbB199
Cla97C11G224530	Cucumber (Gy14) v1	cgywmbB583
Cla97C11G224530	Cucurbita maxima (Rimu)	cmawmbB020
Cla97C11G224530	Cucurbita maxima (Rimu)	cmawmbB219
Cla97C11G224530	Cucurbita maxima (Rimu)	cmawmbB454
Cla97C11G224530	Cucurbita moschata (Rifu)	cmowmbB008
Cla97C11G224530	Cucurbita moschata (Rifu)	cmowmbB203
Cla97C11G224530	Cucurbita moschata (Rifu)	cmowmbB436
Cla97C11G224530	Wild cucumber (PI 183967)	cpiwmbB023
Cla97C11G224530	Wild cucumber (PI 183967)	cpiwmbB197
Cla97C11G224530	Cucumber (Chinese Long) v3	cucwmbB022
Cla97C11G224530	Cucumber (Chinese Long) v3	cucwmbB194
Cla97C11G224530	Cucumber (Chinese Long) v2	cuwmbB023
Cla97C11G224530	Cucumber (Chinese Long) v2	cuwmbB193
Cla97C11G224530	Bottle gourd (USVL1VR-Ls)	lsiwmbB169
Cla97C11G224530	Bottle gourd (USVL1VR-Ls)	lsiwmbB272
Cla97C11G224530	Melon (DHL92) v3.6.1	medwmbB137
Cla97C11G224530	Melon (DHL92) v3.6.1	medwmbB310
Cla97C11G224530	Melon (DHL92) v3.5.1	mewmbB149
Cla97C11G224530	Melon (DHL92) v3.5.1	mewmbB321
Cla97C11G224530	Watermelon (Charleston Gray)	wcgwmbB064
Cla97C11G224530	Watermelon (Charleston Gray)	wcgwmbB179
Cla97C11G224530	Watermelon (97103) v1	wmwmbB117