Cla97C11G224460 (gene) Watermelon (97103) v2

NameCla97C11G224460
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptiondefensin-like protein 1
LocationCla97Chr11 : 30163440 .. 30169021 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGGTAATTAACAACACTATTTTCAGCCCTTTCCCCCACTTCTATTTATTTTTTTCATCTCAAACAAAACTTGGCCGCACTTACAAATTTTGAATGGTAGAAAGTACATAAAAAGAAACTTATTTAATTTGTGTATGACATAATTACTTATATTTTTGGTTTTTTTTTTTTTTGTTTTTTTTTTTGTTTTTTGCTTCTGTGACTTGGTGGCCACAGAGAAGCAAGGGGTGGTGGAGGCGAATGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCCATTGCGACCGACAATGCAAGAATTGGGAAGATGCCAAACATGGAGCTTGCCATGGTCCATTTTTTAGGAGGGCTTGTTATTGCTACTTCAACTGTTAAAAACCATGCAATAACCATATGATGATCATAATCTCCTTCTCCATATATATATATATATATATATATATATATATATATATATATATATATATCATTTCCCTTTTACAACAAAAATAAATAAATAAAAGTTTGTGTGTTTTATTATGTAGGTGTGAAGGAGTCTATATGTAATATTAGTTTTTAATTAATGTTTTTAAGTTTAAGAAGTTTATTGTGGTTTGTGTGATAAATATATATGCTGCTACTTATCTTTGGCAGCTTGTTTGTGTGTTTCTTCTTCTTTACATCTTAATATTGAATAAAATGATTTAGATTACTCTCTCTTCTATTCAGTTATTTTTTCTCCAAAATCATAAATGTATAAAAATAAAATTTTCTAATAATTAACCTAAGTTTTAATATCAACATATCTCGTCGATAATTGATATGTAATATATATTCTTTTTATAATCGAAATGATTAATACTCCATATCTTAGTGGTCTTAGTGTGGTGTACATAGAAAAACTTACATAAGTTTCATTTAAAGCGAATAAAGATTATACATATATGTTAATTATTAATTATTAGAAAGATTTTCTGCTGGAATTTAACTTTTATTTTTTAAACTTCTTCTTTATGTTTTTTAGGGTTTTTTAATTACTTTTGTTATTTTGATAAATTCACTATGCCAGGTACAAGTCTTCTTAATCTGTGTTCTTTTCCTAAAAAAATCCTGTGTTCTTTTCCTAAAAAAATCCTCAATAACGGAGTCTAGAAATATTTGGAAGTTTTAATTTTCTAAAATTCTTAAGATGAAGAGTTGATAGTTTAAAAGTTTGAGTTTAATTTGGATATATTTTTCTCAATTTATACCCCAAACTTACTTATTTATTAATAGATTAATTTGTTGGGAATAGATTATTATGCCATCTTGATCTGATTTTAAATTATCTTTGTTGATTATGTTTTTCTTGTTTTTTTCCTAGATTATTTTTATTATATTCAAATCTATTTTTTAAAATTCATTTTTGTATTTATAAAAGTTTTATAATCATTTTGCTGTTCCTAAAGCTTTTACCATCGTTTTTTCTAAATAAAAATAGCTTTTGAGATTCTTTTCTCTGAAAATTCCTAGGATAGACAGGTCCTAGAAATATCCTAGAAATATTTAAAAGTTTTGATTTTTTTAGATTTCTTGAGCAAGAGATGAGGCAAGAGATCATATTATTTTTAAGAGTTAGAGATTTGATTTCAAGAAAAAGTAGATTTAGTTATTTGAAAAAGGAAACTTTCTTTAAATGGCTACTCTATAACAAATATGAGAATTTTTAATATTTTCTCACTCTCATGATGTGAAACTTTTTCCTAAATTTTAATATAGCTGATTGTTTCTACTCATTTTATGAGTTACAACTTTTCCCTTTTTTTTTTAATCATCCCTATTTGATAATATTGGCCGCTCTGCGTCATTTGATGCACGTGGCAAGAAAATGTTGAATCAAAAGTTAGTCACAATATGTGTGTATATATACATACACCTACGTACCTAACTGAATACTCTCCCTTCGGATCACATAAAAAAAAAAAAAAAATTAAAAACAACTTAGGGTGGTTGGGGCTCCAACTTGGAATGAGTTGAATGTACAGATGTTCACAAGGCGGAGTGAGGACAAGGAAGCCCATCCCCTCCCCATGAAATTCCCTATAGGAATTAGAGAGGGGAGTTCCTATGGAGAATTTGCCAGGATCGAATTCTCTCATATAATTTTTTTTCATTTCTAACAAAGTTTAAATTTATTCTCAATCAAATAAAATGTTCTATATTAAATGGGTCATTTACAACAATAAATAATAAAAATTCAAATGTTTATTTATTTATTAAATTAAATAATATTTGGAACTAAAGAATCATTATATAATAGATAATATTAATTTAAACAAAATTAAAATATTAAATTGATATGAATGTGAAGTTCTAAATTTCCTAATAAAAGTACTTCAACAAGTATTTCAATTTTAAAGGATTGCTTAATTGCATATTCATGATTGTGTAATATTTTACTCATAAAACATTCTCGTTTATTGTTTCATCAGTTCAATTCTATTTTATTTTAATCTTTATTATTTTAATTGTCCAATTTTAATTTTTGTATTTTTACTAAATCTTAAAATTAGTTCTACAATATTAAATTTTAATAAAGAAAAAAATAGTTACTTATTTACAAATATAGGAAGAAATTAAAACTTACCACAAAGATGGCAATTTTATTTAGAATTTAAATTTAATTTCAAGTTTGCTCTTATTTTTTATAGAGATTACACACGTTTTATGAATGATATCACATATATTCATGTATAAGTTAAGTAGATATTAGTAATATTAGTCTGATTGAGATCCATGTATTGGTAATATTAATGGTATTAATGATAAAACTTAAATAGATATCAATGATATCAATCTATTAGTAATATCCATGTATCGATGATATTAGTGTACTTATATTGATGATCAAACTCAGTCTATCGATGATATCACTGATATAAAAAAAGCAGTGATATACCATGATATTCTCTTGTTAATTTATAAATTAATATCATTTTAATTAGTAATATATATATATATTTTGCCATATTAGTGAAAGTCATAGTTAATCTTCCTATAATGTGTTTTATGGTGGACAATGGAATCATAATAAGTTCTATGAAAATTACAAGACTATTAAAAATTAGTGGATAGAGATGAGCACTACATGGTTAATAAAACAAAATGTCACTTGATATCTTTGTATCACCAATATCTTTCAAAGCCGTTTTATTGTGCACTATTTTTTTGAAATTGTCAAGCACAGGTCTATCTATTTTAATGCAACAGTATGCTAGTAAATTCAAGGGTTTTAACATCCGATTTTGCCATTTTTGCATATAGTCTTAGGTTTTGCTATTTTTGTTATTGTATATATATATGCCTTATTGTGCTATCTATGCAAGGCTTCCCAATTTTGATCTATTGATTAAATAATAATAACAATTTTAGTAAAAAAGAAAAACTATGTAAATATATTTTCACAATTTATAAAGAGAATGCTAATAGAGACTGTATTGAAAAAAATCAACAATAAATTAACCATAAAAATTAATTTTCAGATTAATTAAGAATAGACACGGATTAACCAAGAAAGAAATCAAACAACAATTATGAATTATATTTGCACAAAGGTTTGGTTGGTATAACTTTGACTTTTTTTACCTAGACCATCTTGAACCGATCTCTCACACCTACCCACTCACACAATCATGTCAACTTCACTTTGTTAAACTTAAAAGAAGGTTTTTTTTTTTTTTTTTTTAATGAGTTATATAATATGAAATTAGAAAAATTAAATTTATTTTTGGTATGTAGTTGTTTTGTTTATCATGATTTACAACCTCAATTAAGTTTTTTATACATGGATACTCCATATCAAACTTTGTTTTTTAAAAAAAATTATTATAAATAGAAAAAATAACAATCTATTTAAAATAGACATTCATTTGTGTCTATATAGTAAAATGATAAATGTCTATATGGGTCTCTATTGCGATCTATCACAAATAGAAATATATTTATAATTATTTTTAACCATTCTTCTATTTTTTAAAATAGTTTTTTTTTTCTTTCTTTCTTTGGGTTACTTTTAAATTTTCAAACTACAATGAACTCATTTCAAAGTGTAATAAATGATGAACAAATGGGTGGCCATGTGGGACTTGAATGATGTATCTGTCAAGAAACACATGTTAACGTGAAGTGAAGAGAGAGGCAATAAGTCACATATATATGAAAATTCTTTTGTTCTGTTTTAGTTTTTTAGTTAAACAATTATATAGTGAAGATTGAATTACACATCTTTGAGATGATACATCGATACCTTTATACACTAAACTACATATTTGGATTTGCATGCAAAGAAGAGTTATCTATGGTTAACATTTATTATACATTACACTTCTTCTTTCTATAATGAATTAAATAAAGTTTTCAATATTTCTTGCAATTTTAGAAAATAATTATTTTGCATATTAGATCTACTTCCCCAATAATTGTAACACACATCCACTCTCTTATATATATTTTAATGTGTTATTTAATCTTTTGAGCACGACTTTATTAACATGTCATTAACTTGAGATTGAAAGTTTAAATTTAGACAAAATTTCATAAAGAAAATTTAGGGAATAATTTTAGCATTACTATACATATAAATAATAATGAAAAGTTTGAATTTACAATAAAAGAGGTTGTTACTAATGTAAATCAACTAAATTATACTAAATCCGACTAAATAGATTAGAAATTTTACAATTCATAAAATAATATTATTATAATAAAAAGGGCTAAATTAAAAAAAAAAAAAAAAAAAAGAAACTGAAACTTGTTTTTTAAAAAAAAATACTCCTATTCTTTTAACAACGGCAATGTTACTTTGAAAATTTGAAGCTTGGAACAATGTGTCGGTGATAAAATGAAAATTTAGAACCCTAACACCAAACACAGCTAAGTCCCACAATTTCCATTGAAAATTCTTTAATTTTTTCTACACTGCCAAGAATAAAATATAGTGATGAAAGGGATAGAAGTGGGCAGCCTCAGGCTATAAATAGGTATCTTCATGGGGGGATTTTGCAAACACAAAATTCATAAAGAATTAAAAGAATAGAAATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGGTAATTGACAACACTATTTCAGCCCTTTCCCCCACTTCTATTTATTTTTTTCATCTCAAACAAAACTTGGCCGCACTTACAAATTTTGAATGGTAAAAAGTACACAGAAAGAAACTTATTTAATTTGTGTATGACATAATTACTTATGTTTTTGTTTTTGTTTTTTGTTTTTTGTTTTTTTTTTTTGCTTCTGTGACTTGGTGGCCACAGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGGTCCATTTTTTAG

mRNA sequence

ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAATGTGTGCGAGAAGCGAAGCAAGACAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGGTCCATTTTTTAG

Coding sequence (CDS)

ATGGGGAAGGTTGTGGGGAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGCCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAATGTGTGCGAGAAGCGAAGCAAGACAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGGTCCATTTTTTAG

Protein sequence

MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKTEARGGGGEGVREAKQDVVGMVREHEQLRPTMQELGRCQTWSLPWSIF
BLAST of Cla97C11G224460 vs. NCBI nr
Match: XP_004150110.1 (PREDICTED: defensin-like protein 1 [Cucumis sativus] >KGN59894.1 hypothetical protein Csa_3G851940 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M KVVGNSAKM+VALLFLLALMLSMNEKQGVVEA VCE+RSKT
Sbjct: 1  MAKVVGNSAKMIVALLFLLALMLSMNEKQGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. NCBI nr
Match: XP_008454663.1 (PREDICTED: defensin-like protein 1 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 3.4e-09
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M KVVGNSAKM+VA LFLLAL LSMNEKQGVVEA VCE+RSKT
Sbjct: 1  MAKVVGNSAKMIVAFLFLLALTLSMNEKQGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. NCBI nr
Match: XP_022976615.1 (defensin-like protein 1 [Cucurbita maxima])

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-07
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M K + NSAKM VA LFL ALMLSMNEK GVVEA VCE+RSKT
Sbjct: 1  MAKALANSAKMAVAFLFLFALMLSMNEKLGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. NCBI nr
Match: XP_023535147.1 (defensin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-05
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M K + NSAKM VA +FL ALMLS NEK GVVEA VCE+RSKT
Sbjct: 1  MAKALANSAKMAVAFVFLFALMLSTNEKLGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. NCBI nr
Match: XP_022935763.1 (defensin-like protein 1 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M K + +SAKM VA LFL ALMLSMN + GVVEA VCE+RSKT
Sbjct: 1  MAKALASSAKMAVAFLFLFALMLSMNGRLGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. TrEMBL
Match: tr|A0A0A0LFX9|A0A0A0LFX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851940 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M KVVGNSAKM+VALLFLLALMLSMNEKQGVVEA VCE+RSKT
Sbjct: 1  MAKVVGNSAKMIVALLFLLALMLSMNEKQGVVEAKVCERRSKT 43

BLAST of Cla97C11G224460 vs. TrEMBL
Match: tr|A0A1S3BZX7|A0A1S3BZX7_CUCME (defensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495015 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-09
Identity = 37/43 (86.05%), Postives = 39/43 (90.70%), Query Frame = 0

Query: 1  MGKVVGNSAKMVVALLFLLALMLSMNEKQGVVEANVCEKRSKT 44
          M KVVGNSAKM+VA LFLLAL LSMNEKQGVVEA VCE+RSKT
Sbjct: 1  MAKVVGNSAKMIVAFLFLLALTLSMNEKQGVVEAKVCERRSKT 43

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150110.12.3e-1090.70PREDICTED: defensin-like protein 1 [Cucumis sativus] >KGN59894.1 hypothetical pr... [more]
XP_008454663.13.4e-0986.05PREDICTED: defensin-like protein 1 [Cucumis melo][more]
XP_022976615.19.1e-0776.74defensin-like protein 1 [Cucurbita maxima][more]
XP_023535147.11.0e-0572.09defensin-like protein 1 [Cucurbita pepo subsp. pepo][more]
XP_022935763.15.0e-0569.77defensin-like protein 1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
tr|A0A0A0LFX9|A0A0A0LFX9_CUCSA1.5e-1090.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851940 PE=3 SV=1[more]
tr|A0A1S3BZX7|A0A1S3BZX7_CUCME2.2e-0986.05defensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495015 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G224460.1Cla97C11G224460.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C11G224460MELO3C018229Melon (DHL92) v3.5.1mewmbB321
Cla97C11G224460MELO3C018229.2Melon (DHL92) v3.6.1medwmbB310
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C11G224460Watermelon (97103) v2wmbwmbB068
Cla97C11G224460Silver-seed gourdcarwmbB0155
Cla97C11G224460Silver-seed gourdcarwmbB0998
Cla97C11G224460Silver-seed gourdcarwmbB0321
Cla97C11G224460Silver-seed gourdcarwmbB0945
Cla97C11G224460Cucumber (Gy14) v2cgybwmbB024
Cla97C11G224460Cucumber (Gy14) v2cgybwmbB185
Cla97C11G224460Cucumber (Gy14) v1cgywmbB199
Cla97C11G224460Cucumber (Gy14) v1cgywmbB583
Cla97C11G224460Cucurbita maxima (Rimu)cmawmbB020
Cla97C11G224460Cucurbita maxima (Rimu)cmawmbB219
Cla97C11G224460Cucurbita maxima (Rimu)cmawmbB410
Cla97C11G224460Cucurbita maxima (Rimu)cmawmbB454
Cla97C11G224460Cucurbita moschata (Rifu)cmowmbB008
Cla97C11G224460Cucurbita moschata (Rifu)cmowmbB203
Cla97C11G224460Cucurbita moschata (Rifu)cmowmbB393
Cla97C11G224460Cucurbita moschata (Rifu)cmowmbB436
Cla97C11G224460Wild cucumber (PI 183967)cpiwmbB023
Cla97C11G224460Wild cucumber (PI 183967)cpiwmbB197
Cla97C11G224460Cucumber (Chinese Long) v3cucwmbB022
Cla97C11G224460Cucumber (Chinese Long) v3cucwmbB194
Cla97C11G224460Cucumber (Chinese Long) v2cuwmbB023
Cla97C11G224460Cucumber (Chinese Long) v2cuwmbB193
Cla97C11G224460Bottle gourd (USVL1VR-Ls)lsiwmbB169
Cla97C11G224460Bottle gourd (USVL1VR-Ls)lsiwmbB272
Cla97C11G224460Melon (DHL92) v3.6.1medwmbB137
Cla97C11G224460Melon (DHL92) v3.5.1mewmbB149
Cla97C11G224460Watermelon (Charleston Gray)wcgwmbB064
Cla97C11G224460Watermelon (Charleston Gray)wcgwmbB179
Cla97C11G224460Watermelon (97103) v1wmwmbB117
Cla97C11G224460Watermelon (97103) v1wmwmbB358
Cla97C11G224460Wax gourdwgowmbB562