Cla97C11G212750 (gene) Watermelon (97103) v2

Overview
NameCla97C11G212750
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC106776850
LocationCla97Chr11 : 6103592 .. 6103849 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

mRNA sequence

ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

Coding sequence (CDS)

ATGGGATCTATGCTGGCTGCCGGAATCATGAAGGTTGCAGCAGAGAACAAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGGAAGTTTAAGGATAACTGTAGGTCGGTGGCTACCTAAGGAAACTCTAATTCGATCTGCCCTCCGGCTGGGAGGCATCTGCACGGGGACCATCCTTTTGTTGCGGCATGCTCCTGAGATTTACGGATTCGCAGGGGGCCTCAGGCCCTACTTAGTTGACTGA

Protein sequence

MGSMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGICTGTILLLRHAPEIYGFAGGLRPYLVD
Homology
[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_023535322.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111796795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.1 bits (222), Expect = 3.9e-15
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKTGSERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 110 SDLAGERSQFAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 165

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: CDY45487.1 (BnaCnng12460D [Brassica napus] >CDY36713.1 BnaC02g31340D [Brassica napus] >OVA11783.1 hypothetical protein BVC80_49g3 [Macleaya cordata] >OWM62585.1 hypothetical protein CDL15_Pgr000030 [Punica granatum])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_010646950.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100853704, partial [Vitis vinifera])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 130 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 185

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_016650442.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107881344 [Prunus mume])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 214 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 269

[Close]
BLAST of Cla97C11G212750 vs. NCBI nr
Match: XP_021666753.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC110654922 [Hevea brasiliensis])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 175 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 230

[Close]
BLAST of Cla97C11G212750 vs. TrEMBL
Match: tr|A0A078HIR1|A0A078HIR1_BRANA (BnaC02g31340D protein OS=Brassica napus OX=3708 GN=BnaC02g31340D PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. TrEMBL
Match: tr|A0A200QMT4|A0A200QMT4_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_49g3 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. TrEMBL
Match: tr|A0A218VQ03|A0A218VQ03_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000030 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 46/56 (82.14%), Postives = 47/56 (83.93%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA RLGGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETPIRSAPRLGGI 60

[Close]
BLAST of Cla97C11G212750 vs. TrEMBL
Match: tr|A0A178U5F8|A0A178U5F8_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_ATUG03820 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-14
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 3  SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
          S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA R GGI
Sbjct: 5  SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETAIRSAPRKGGI 60

[Close]
BLAST of Cla97C11G212750 vs. TrEMBL
Match: tr|F4IMB1|F4IMB1_ARATH (Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=At2g07599 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.7e-14
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA R GGI
Sbjct: 195 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETAIRSAPRKGGI 250

[Close]
BLAST of Cla97C11G212750 vs. TAIR10
Match: AT2G07599.2 (unknown protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.0e-17
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 3   SMLAAGIMKVAAENKTGSERTFVRFFSTKHGSLRITVGRWLPKETLIRSALRLGGI 59
           S LA    + AAENKT SERTFVRFFSTKHGSLRITVGRWLPKET IRSA R GGI
Sbjct: 280 SDLAGERSQFAAENKTASERTFVRFFSTKHGSLRITVGRWLPKETAIRSAPRKGGI 335

The following BLAST results are available for this feature:
BLAST of Cla97C11G212750 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023535322.13.9e-1583.93LOW QUALITY PROTEIN: uncharacterized protein LOC111796795 [Cucurbita pepo subsp.... [more]
CDY45487.11.9e-1482.14BnaCnng12460D [Brassica napus] >CDY36713.1 BnaC02g31340D [Brassica napus] >OVA11... [more]
XP_010646950.11.9e-1482.14PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100853704, partial [V... [more]
XP_016650442.11.9e-1482.14PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107881344 [Prunus mum... [more]
XP_021666753.11.9e-1482.14LOW QUALITY PROTEIN: uncharacterized protein LOC110654922 [Hevea brasiliensis][more]
BLAST of Cla97C11G212750 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A078HIR1|A0A078HIR1_BRANA1.3e-1482.14BnaC02g31340D protein OS=Brassica napus OX=3708 GN=BnaC02g31340D PE=4 SV=1[more]
tr|A0A200QMT4|A0A200QMT4_9MAGN1.3e-1482.14Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_49g3 PE=4 SV=1[more]
tr|A0A218VQ03|A0A218VQ03_PUNGR1.3e-1482.14Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr000030 PE=4 SV=1[more]
tr|A0A178U5F8|A0A178U5F8_ARATH3.7e-1480.36Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=AXX17_ATUG03820 PE=4 ... [more]
tr|F4IMB1|F4IMB1_ARATH3.7e-1480.36Uncharacterized protein OS=Arabidopsis thaliana OX=3702 GN=At2g07599 PE=4 SV=1[more]
BLAST of Cla97C11G212750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C11G212750 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07599.21.0e-1780.36unknown protein[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G212750.1Cla97C11G212750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C11G212750Watermelon (97103) v2wmbwmbB046
Cla97C11G212750Watermelon (97103) v2wmbwmbB069
Cla97C11G212750Watermelon (97103) v2wmbwmbB076
Cla97C11G212750Silver-seed gourdcarwmbB0015
Cla97C11G212750Silver-seed gourdcarwmbB0163
Cla97C11G212750Silver-seed gourdcarwmbB0269
Cla97C11G212750Silver-seed gourdcarwmbB0652
Cla97C11G212750Silver-seed gourdcarwmbB0689
Cla97C11G212750Silver-seed gourdcarwmbB0952
Cla97C11G212750Cucumber (Gy14) v2cgybwmbB271
Cla97C11G212750Cucumber (Gy14) v2cgybwmbB347
Cla97C11G212750Cucumber (Gy14) v2cgybwmbB403
Cla97C11G212750Cucumber (Gy14) v1cgywmbB210
Cla97C11G212750Cucumber (Gy14) v1cgywmbB243
Cla97C11G212750Cucumber (Gy14) v1cgywmbB566
Cla97C11G212750Cucurbita maxima (Rimu)cmawmbB296
Cla97C11G212750Cucurbita maxima (Rimu)cmawmbB676
Cla97C11G212750Cucurbita maxima (Rimu)cmawmbB724
Cla97C11G212750Cucurbita maxima (Rimu)cmawmbB727
Cla97C11G212750Cucurbita maxima (Rimu)cmawmbB729
Cla97C11G212750Cucurbita moschata (Rifu)cmowmbB278
Cla97C11G212750Cucurbita moschata (Rifu)cmowmbB648
Cla97C11G212750Cucurbita moschata (Rifu)cmowmbB697
Cla97C11G212750Cucurbita moschata (Rifu)cmowmbB700
Cla97C11G212750Wild cucumber (PI 183967)cpiwmbB291
Cla97C11G212750Wild cucumber (PI 183967)cpiwmbB447
Cla97C11G212750Cucumber (Chinese Long) v3cucwmbB287
Cla97C11G212750Cucumber (Chinese Long) v3cucwmbB381
Cla97C11G212750Cucumber (Chinese Long) v3cucwmbB441
Cla97C11G212750Cucumber (Chinese Long) v2cuwmbB284
Cla97C11G212750Cucumber (Chinese Long) v2cuwmbB365
Cla97C11G212750Cucumber (Chinese Long) v2cuwmbB423
Cla97C11G212750Bottle gourd (USVL1VR-Ls)lsiwmbB122
Cla97C11G212750Bottle gourd (USVL1VR-Ls)lsiwmbB222
Cla97C11G212750Bottle gourd (USVL1VR-Ls)lsiwmbB270
Cla97C11G212750Melon (DHL92) v3.6.1medwmbB265
Cla97C11G212750Melon (DHL92) v3.6.1medwmbB516
Cla97C11G212750Melon (DHL92) v3.5.1mewmbB280
Cla97C11G212750Melon (DHL92) v3.5.1mewmbB522
Cla97C11G212750Watermelon (Charleston Gray)wcgwmbB042
Cla97C11G212750Watermelon (Charleston Gray)wcgwmbB065
Cla97C11G212750Watermelon (Charleston Gray)wcgwmbB196
Cla97C11G212750Watermelon (Charleston Gray)wcgwmbB294
Cla97C11G212750Watermelon (97103) v1wmwmbB152
Cla97C11G212750Watermelon (97103) v1wmwmbB286
Cla97C11G212750Watermelon (97103) v1wmwmbB362
Cla97C11G212750Wax gourdwgowmbB030
Cla97C11G212750Wax gourdwgowmbB290
Cla97C11G212750Wax gourdwgowmbB414