Cla97C11G211160 (gene) Watermelon (97103) v2

Overview
NameCla97C11G211160
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr11 : 4543181 .. 4546188 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGCAGAGGCCCTGAGAAAGTTGCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGCTCTGGGGGTTTGTTTCTTTCAAATGGGTCTGAAGAAAAGGAACTGTAGAAGATAAGCAAAGCACGCCAAGAAAGAAATGAAGAAAGAAGATGAAAAGCAAAACAAAACCCATCTCATTTTTTGAGGTCAGCTTCTTCATTCGTTCAGATATCTTCCAGATTACCCCTTTCTGTTTTATTCTCCTCCTTAGTATGTTTTTATGGGCCCAAATTCAGAGCAGAATCAATGGAATTGTACAAAAATTTCACGTGTGTGCTTCTGCTGCAAACCCCCCCCCCCCCCCCTCCCCCTTTCCTTTTTGCAAAACAATTTTCCCTCTTCCCCATATTGCTTTAAATAGTTATCTGGCATATGAAATCCCTTTGTGTTCTTCTTGCACTGCAGCTATATCTTTGATGTGTCCTCTATCCTGAACAACCTTCCAAGCAAAGCTAGCTGGCCAAACGAGTCCGTACAATGATTGTCTTGTGTTCTTTTCTTTTTTTTTTTTTTTTTTTTCTTTTTATCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTCTCCCTATGGAGAAATGCTTGGTTCCCATTTCCTCTCTGTTGGGATTTTCTTAGCCATTGATATCTTAGCAAGTAAAACTCATGTTTTACCTGCTTTTCTTGGTTGGATTCGATATGTTGTTTCCATCATTGTTCTAGAGATTTGAACCTTAATTCTCTTGGTGAATTTGTTTGGCTGTCTTATCATCTTATTATGGAATTGAAACACATAGCTCAGGAGTGTGAAGTCCAAGCATGTTAGAGCCATTATATTTAAACAATAAACTGATTGTTAGTATCTAGAAGGTGAAATTATGGATTGCTTGTTGAACCTCGTAAATTACGTATTTGCGAAATGTATGTCTGGATATTCCTTGCTAGTAATGGAAAATTTCAGGATCAAGTCATTCAAACTGTAGTATTGTTACGTGTATTTGTAATGATGCCAGTCTAGTTTGGCACGCCAGTAAACGAGATTAAAGAACTAGTAATAAACCGATGGGTGTTTAGTATGAAGAATTGTTTGGTGATGCTGGAAATTATATCAATTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGGTTGTTTTGTTTTGTAGCAACTGTTTCGGAATGGTGTTATTGCAATATACTCTTATGCTTTGCCTACTTACTCCTTCATGTAAGTTTATAATGGTCCACAGCTATGTGTTCCCTTGCTATATTTGGTTATCTTTATGTAAATAATAAGTGACATAATTTACTGGTCTCCAGCTAGAAGATATGGTTGAGCTTTGGCTGGCCCATTTTATATGTCTCACACTTCAATTTTCAAAATATTGATAATCATATTCCAACTGATATCATGATATTCTTTTCAACTTAAATATGATATAGAATCTTTGTTGTCCTAGATGCAAAGAATTGAGATGGCCCAACTGGGTTTTTTTGTCTGCTCTTGCTTTTCTTTGTCATAAAAGATACTTGATCAGGGGACCTCATTTTTGTTTCTAATCGATATGATATAGCATCGACAAAGTTATTGTCTTGGGATCTTTATCAGCAGCAAGATTTTTCTTTCCATCTCTCTTGTCATACTGTCTAAATACTTAGAATGCATTAAGAGCAATCAATTCCTCTTGTATAAGTATGATTGGTGAAGATCTACACTGTCTACTTACAATGTCTTACACGTTGACACAATAAGAGTGATTATTTGGGCAATTAGGAATAGAGTTTGCTAACTGTGGCCTTTTAGGATCCAAGTAGCGACTCATTTCGAACACGTTCTAGGAAAAACATACTCTAAGAAAGCATCTGATGACATAAGATGGCAGGGTGACACCCCTGCTTTAATCTCTAACTTAGGTAGAGAAGTGCTATCCTAAACCATACATTGCAGATTAATACCTCGAAGCAGGCTTGTGATGGTGTTGTCTATTTTCTACCTGCACCGTCCAAACAAGTAATTTCATTATATTGGTTGGTAAAAAAGAGATGATGGCTGGCAAGTGAAACTTGCGCTGTTGGGATTCATGGTGGTGTTTTACAGTTGTTAAGCTGAGTAGATGGACTAATGTTGCAGTTTGAAAAATTGGGAAGACAGATGAAATGACATTCTTGGAGCAATCAATACATGTAATAGATCGGTTAAAATCAATAGTTTCCTCCAAAAGTAATCTTGGTTTCATTAATTGATAGATCTTCCTGAGAAGCATAGTTTCTATGTCTATAGTTACATGATATCTCTCGTGATCTTAAGCCTCCAATAGACGGTACACCATTGTCCTTAAGACCATTTTGTCAAGTTGCTCGAGTCTTGGTCAATGCTATACTGGATCCAACCTGGTGGGCATAAATGATAAAACTTGGAACTGATCATTGCTTGATTATTTACTTCCATCACATGAAGTGGAATCTGTTTGAGAATGATATGTGCACTTAGATACGCCCTCCGTTGACGTTAAGAATCCTTATCAAGTATCATCCTACTCCTATTCTTTTTCACATGAAAGTAATACTGGTATCGCTTCCTCCTCTCTCGTGGGACTGTTCTGCTACACAGTGGTCCTCTTCTTATGAGCCATTGAAAGACGAGTAATTGTGAATATGCATTTTTCATTTATTTCCAAGAGGCTGATGGAAAGGATGCTGATTCAATTGTTAAGATGCTATACATGGCTTTTGTATTCAATGCAGCCTTGCAGGTTGGAAGAAACCAACGAGAATCTTGAACTTTATGGAGAGGAGAAGAATCGCACCGCCTCAACCTAGTTGGATGGTCCAAAGGCGGCTGCAAAAGAATAAAGATAACTTATTATATGGAATCTTTGGAGCCAGTGAGCTTCGAATTCTGAGTTGTTTGTTTTGTTTTCCTCCAAGATTTATGCTAGTGAAGTTAAAGAATTAG

mRNA sequence

ATGAAAGGCAGAGGCCCTGAGAAAGTTGCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGCTCTGGGGCTATATCTTTGATGTGTCCTCTATCCTGAACAACCTTCCAAGCAAAGCTAGCTGGCCAAACGAGTCCTTTGGCACGCCAGTAAACGAGATTAAAGAACTAGTAATAAACCGATGGGTGTTTAGTATGAAGAATTGTTTGGTGATGCTGGAAATTATATCAATTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGCAACTGTTTCGGAATGGTGTTATTGCAATATACTCTTATGCTTTGCCTACTTACTCCTTCATGATCCAAGTAGCGACTCATTTCGAACACGTTCTAGGAAAAACATACTCTAAGAAAGCATCTGATGACATAAGATGGCAGGGTGACACCCCTGCTTTAATCTCTAACTTAGGTAGAGAAATTAATACCTCGAAGCAGGCTTGTGATGGTGTTGTCTATTTTCTACCTGCACCGTCCAAACAATTACATGATATCTCTCGTGATCTTAAGCCTCCAATAGACGGTACACCATTGTCCTTAAGACCATTTTGTCAAGTTGCTCGAGTCTTGATACGCCCTCCGTTGACGTTAAGAATCCTTATCAAGTATCATCCTACTCCTATTCTTTTTCACATGAAAGTAATACTGGTATCGCTTCCTCCTCTCTCGTGGGACTGTTCTGCTACACAGTGGTCCTCTTCTTATGAGCCATTGAAAGACGACCTTGCAGGTTGGAAGAAACCAACGAGAATCTTGAACTTTATGGAGAGGAGAAGAATCGCACCGCCTCAACCTAGTTGGATGGTCCAAAGGCGGCTGCAAAAGAATAAAGATAACTTATTATATGGAATCTTTGGAGCCAGTGAGCTTCGAATTCTGAGTTGTTTGTTTTGTTTTCCTCCAAGATTTATGCTAGTGAAGTTAAAGAATTAG

Coding sequence (CDS)

ATGAAAGGCAGAGGCCCTGAGAAAGTTGCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGCTCTGGGGCTATATCTTTGATGTGTCCTCTATCCTGAACAACCTTCCAAGCAAAGCTAGCTGGCCAAACGAGTCCTTTGGCACGCCAGTAAACGAGATTAAAGAACTAGTAATAAACCGATGGGTGTTTAGTATGAAGAATTGTTTGGTGATGCTGGAAATTATATCAATTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGCAACTGTTTCGGAATGGTGTTATTGCAATATACTCTTATGCTTTGCCTACTTACTCCTTCATGATCCAAGTAGCGACTCATTTCGAACACGTTCTAGGAAAAACATACTCTAAGAAAGCATCTGATGACATAAGATGGCAGGGTGACACCCCTGCTTTAATCTCTAACTTAGGTAGAGAAATTAATACCTCGAAGCAGGCTTGTGATGGTGTTGTCTATTTTCTACCTGCACCGTCCAAACAATTACATGATATCTCTCGTGATCTTAAGCCTCCAATAGACGGTACACCATTGTCCTTAAGACCATTTTGTCAAGTTGCTCGAGTCTTGATACGCCCTCCGTTGACGTTAAGAATCCTTATCAAGTATCATCCTACTCCTATTCTTTTTCACATGAAAGTAATACTGGTATCGCTTCCTCCTCTCTCGTGGGACTGTTCTGCTACACAGTGGTCCTCTTCTTATGAGCCATTGAAAGACGACCTTGCAGGTTGGAAGAAACCAACGAGAATCTTGAACTTTATGGAGAGGAGAAGAATCGCACCGCCTCAACCTAGTTGGATGGTCCAAAGGCGGCTGCAAAAGAATAAAGATAACTTATTATATGGAATCTTTGGAGCCAGTGAGCTTCGAATTCTGAGTTGTTTGTTTTGTTTTCCTCCAAGATTTATGCTAGTGAAGTTAAAGAATTAG

Protein sequence

MKGRGPEKVAPTSHPEQNKHTDCRLWGYIFDVSSILNNLPSKASWPNESFGTPVNEIKELVINRWVFSMKNCLVMLEIISILQSVNSQDEIFFGIKHIPDDLQLFRNGVIAIYSYALPTYSFMIQVATHFEHVLGKTYSKKASDDIRWQGDTPALISNLGREINTSKQACDGVVYFLPAPSKQLHDISRDLKPPIDGTPLSLRPFCQVARVLIRPPLTLRILIKYHPTPILFHMKVILVSLPPLSWDCSATQWSSSYEPLKDDLAGWKKPTRILNFMERRRIAPPQPSWMVQRRLQKNKDNLLYGIFGASELRILSCLFCFPPRFMLVKLKN
Homology
[Close]
BLAST of Cla97C11G211160 vs. NCBI nr
Match: XP_023512523.1 (uncharacterized protein LOC111777245 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-06
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 57  IKELVINRWVFSMKNCLVMLEIISILQSVNSQDEIFFGIKHIPDDL 103
           +KE +INR VFSM N L+MLE  S+L+ +NSQDE+F  IKHIPDDL
Sbjct: 1   MKEPIINRRVFSMNNHLIMLETASVLECINSQDELFLDIKHIPDDL 46

[Close]
BLAST of Cla97C11G211160 vs. NCBI nr
Match: XP_022146148.1 (uncharacterized protein LOC111015434 isoform X2 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 9.2e-04
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 8   KVAPTSHPEQNKHTDCRLWGYIFDVSSILNNLPSKASWPNESFGTPVNEIKELV 62
           K+ P  HP    H  C     IFDVSSILNN+PSKASWPN+ FG  + + + LV
Sbjct: 99  KIKPKIHP---SHLRC-----IFDVSSILNNIPSKASWPNDCFGMGLLQPQRLV 144

The following BLAST results are available for this feature:
BLAST of Cla97C11G211160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023512523.11.5e-0665.22uncharacterized protein LOC111777245 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022146148.19.2e-0451.85uncharacterized protein LOC111015434 isoform X2 [Momordica charantia][more]
BLAST of Cla97C11G211160 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cla97C11G211160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C11G211160 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C11G211160.1Cla97C11G211160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C11G211160ClCG11G004410Watermelon (Charleston Gray)wcgwmbB065
Cla97C11G211160CmoCh02G004040Cucurbita moschata (Rifu)cmowmbB587
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C11G211160Watermelon (97103) v2wmbwmbB065
Cla97C11G211160Silver-seed gourdcarwmbB0323
Cla97C11G211160Silver-seed gourdcarwmbB0929
Cla97C11G211160Silver-seed gourdcarwmbB0993
Cla97C11G211160Cucumber (Gy14) v2cgybwmbB105
Cla97C11G211160Cucumber (Gy14) v2cgybwmbB494
Cla97C11G211160Cucumber (Gy14) v1cgywmbB150
Cla97C11G211160Cucumber (Gy14) v1cgywmbB584
Cla97C11G211160Cucurbita maxima (Rimu)cmawmbB457
Cla97C11G211160Cucurbita maxima (Rimu)cmawmbB527
Cla97C11G211160Cucurbita maxima (Rimu)cmawmbB567
Cla97C11G211160Cucurbita maxima (Rimu)cmawmbB613
Cla97C11G211160Cucurbita moschata (Rifu)cmowmbB438
Cla97C11G211160Cucurbita moschata (Rifu)cmowmbB507
Cla97C11G211160Cucurbita moschata (Rifu)cmowmbB544
Cla97C11G211160Wild cucumber (PI 183967)cpiwmbB112
Cla97C11G211160Wild cucumber (PI 183967)cpiwmbB199
Cla97C11G211160Cucumber (Chinese Long) v3cucwmbB115
Cla97C11G211160Cucumber (Chinese Long) v3cucwmbB196
Cla97C11G211160Cucumber (Chinese Long) v3cucwmbB541
Cla97C11G211160Cucumber (Chinese Long) v2cuwmbB110
Cla97C11G211160Bottle gourd (USVL1VR-Ls)lsiwmbB043
Cla97C11G211160Bottle gourd (USVL1VR-Ls)lsiwmbB080
Cla97C11G211160Melon (DHL92) v3.6.1medwmbB082
Cla97C11G211160Melon (DHL92) v3.6.1medwmbB162
Cla97C11G211160Melon (DHL92) v3.5.1mewmbB089
Cla97C11G211160Melon (DHL92) v3.5.1mewmbB176
Cla97C11G211160Watermelon (Charleston Gray)wcgwmbB137
Cla97C11G211160Watermelon (97103) v1wmwmbB315
Cla97C11G211160Watermelon (97103) v1wmwmbB361
Cla97C11G211160Wax gourdwgowmbB123
Cla97C11G211160Wax gourdwgowmbB240
Cla97C11G211160Wax gourdwgowmbB352