Cla97C11G210370 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C11G210370
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Auxin-responsive family protein
Location	Cla97Chr11 : 3764493 .. 3764786 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTCGATTGCAATCTTTGGTTCCTCAGGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCACGTGGCAGTTTACGTGGGAGAGATTCAAAGTAAGCAGTTTGTGGTTCCAATATCTTACTTGAATCATCCATTATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGCTTCCATCATCCGCAGGGGGGCCTAACAATTCCTTGTAAAGAAGACACCTTTCTTGATCTCACTTCTAGACTGCAAGTATCTTGA

mRNA sequence

ATGGGAATTCGATTGCAATCTTTGGTTCCTCAGGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCACGTGGCAGTTTACGTGGGAGAGATTCAAAGTAAGCAGTTTGTGGTTCCAATATCTTACTTGAATCATCCATTATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGCTTCCATCATCCGCAGGGGGGCCTAACAATTCCTTGTAAAGAAGACACCTTTCTTGATCTCACTTCTAGACTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGAATTCGATTGCAATCTTTGGTTCCTCAGGCCAAGCAAATCCTGAAGATGCAGTCAGGTTTTACAAAAAATCAGTTAGATGTTCCAAAAGGGCACGTGGCAGTTTACGTGGGAGAGATTCAAAGTAAGCAGTTTGTGGTTCCAATATCTTACTTGAATCATCCATTATTCCAGCAACTGCTCAGCTATGCAGAGGAAGAATTTGGCTTCCATCATCCGCAGGGGGGCCTAACAATTCCTTGTAAAGAAGACACCTTTCTTGATCTCACTTCTAGACTGCAAGTATCTTGA

Protein sequence

MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS

Homology

[Close]

BLAST of Cla97C11G210370 vs. NCBI nr
Match: XP_008457635.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 5.3e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP AKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSK+FVVPISYLNHP FQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 2.5e-42
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIR  SLVP AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ K+FVVPISYLNHP FQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 5.5e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIR  SLVP AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ K+F+VPISYLNHP FQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. NCBI nr
Match: XP_023512611.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.5 bits (454), Expect = 5.5e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIR  SLVP AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQ K+FVVPISYLNHP FQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LL++AEE+FGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLNHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. NCBI nr
Match: XP_022947575.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata])

HSP 1 Score: 179.1 bits (453), Expect = 7.2e-42
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP AKQILKMQSGFTK+QLDVPKGHVAVYVGEIQ K+F+VPISYLNHPLFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPLFQK 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLS+AEEEFGFHHPQG LTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGSLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. TrEMBL
Match: tr|A0A1S3C5X3|A0A1S3C5X3_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP AKQ+LKMQSGFTKNQLDVPKGHVAVYVGEIQSK+FVVPISYLNHP FQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Cla97C11G210370 vs. TrEMBL
Match: tr|A0A0A0LPI0|A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-40
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MG RL SLVP AKQILKMQSGFTKNQL+VPKGHVAVYVGEIQ K+FVVPISYLN P FQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LLS+AEEEFGFHHP GGLTIPCKED F+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cla97C11G210370 vs. TrEMBL
Match: tr|A0A1S4E1Q7|A0A1S4E1Q7_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991558 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP AKQILK+QSG TKNQLDVPKGHVAVYVGEIQ K+FVVPISYLNHP F+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKED F ++TSRLQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSRLQAS 97

[Close]

BLAST of Cla97C11G210370 vs. TrEMBL
Match: tr|A0A1S3C5I3|A0A1S3C5I3_CUCME (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP AKQILKMQSGFTKN+L+VPKGHVAVYVGEIQ K+FVVPISYLN P FQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPCKED F+DLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Cla97C11G210370 vs. TrEMBL
Match: tr|A0A0A0LIZ9|A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-39
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQ 60
          MGIRL SLVP  KQILK+QSGF K QLDVPKGHVA+YVGEIQ K+FVVPISYLNHP FQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          LL+++EEEFGFHHPQG LTIPCKED F+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Cla97C11G210370 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q K+++VP+SYLN P FQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDTFLDLTSRLQ 96
           HP GGLTIPC EDTF+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Cla97C11G210370 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.7e-22
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q K+++VPISYLN P FQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDTFLDLTSRLQ 96
          GLTIPC EDTF+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Cla97C11G210370 vs. Swiss-Prot
Match: sp|Q9FJF7|SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.6e-22
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLD 89
          PKG +AVYVGE Q K+++VP+SYLN P FQ LLS +E+EFGF HP GGLTIPC EDTF++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cla97C11G210370 vs. Swiss-Prot
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-21
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLD 89
          PKG +AVYVGE Q K+++VP+SYL+ P FQ LLS +EEEFGF HP GGLTIPC EDTF++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cla97C11G210370 vs. Swiss-Prot
Match: sp|Q9FJF6|SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-21
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 30 PKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLD 89
          PKG +AVYVGE Q K+++VP+SYLN P FQ LLS +EEEFGF HP GGLTIPC EDTF++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRL 95
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cla97C11G210370 vs. TAIR10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-26
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILKMQSGFTKNQLDVPKGHVAVYVGE-IQSKQFVVPISYLNHPLFQ 60
          M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE +Q ++FVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Cla97C11G210370 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MGIRLQSLVPQAKQILK----MQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S    + LDVPKG++AVYVGE   K+FVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSXXXSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 LFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSR 94
           FQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Cla97C11G210370 vs. TAIR10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 0


Query: 1   MGIRLQSLVPQAKQILKMQSGFTKNQLD------VPKGHVAVYVG---EIQSKQFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E++ K+FVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLDL-TSRLQ 96
           +LNHP F++ LS AEEEFGF+HP GGLTIPC+E+ FLDL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Cla97C11G210370 vs. TAIR10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MGIRLQSLVPQAKQILKMQSGFTKNQLD-----------VPKGHVAVYVGE-IQSKQFVV 60
           MG+ ++S++P AKQI K QS   KN              VPKGHVAVYVGE ++ K+FVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNXXXXXXXXXXXSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPLFQQLLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQV 97
           PISYLNHPLF++ L+ AEEE GFHH  GGLTIPC+E++FL L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Cla97C11G210370 vs. TAIR10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 6.3e-24
Identity = 52/84 (61.90%), Postives = 63/84 (75.00%), Query Frame = 0


Query: 12 AKQILKMQSGFTKNQLDVPKGHVAVYVGEIQSKQFVVPISYLNHPLFQQLLSYAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q K+++VP+SYLN P FQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDTFLDLTSRLQ 96
           HP GGLTIPC EDTF+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

The following BLAST results are available for this feature:

BLAST of Cla97C11G210370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457635.1	5.3e-45	94.85	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]	[more]
XP_022944365.1	2.5e-42	89.69	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	5.5e-42	88.66	auxin-responsive protein SAUR24-like [Cucurbita moschata]	[more]
XP_023512611.1	5.5e-42	88.66	auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947575.1	7.2e-42	88.66	auxin-responsive protein SAUR24-like [Cucurbita moschata]	[more]

BLAST of Cla97C11G210370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5X3\|A0A1S3C5X3_CUCME	3.5e-45	94.85	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497283 PE=...	[more]
tr\|A0A0A0LPI0\|A0A0A0LPI0_CUCSA	2.6e-40	86.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258720 PE=4 SV=1	[more]
tr\|A0A1S4E1Q7\|A0A1S4E1Q7_CUCME	1.0e-39	84.54	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC107991558 PE=...	[more]
tr\|A0A1S3C5I3\|A0A1S3C5I3_CUCME	1.7e-39	85.57	auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497281 PE=...	[more]
tr\|A0A0A0LIZ9\|A0A0A0LIZ9_CUCSA	2.2e-39	82.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258760 PE=4 SV=1	[more]

BLAST of Cla97C11G210370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FK62\|SAU24_ARATH	1.1e-22	61.90	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
sp\|Q9FJG0\|SAU20_ARATH	5.7e-22	63.29	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 S...	[more]
sp\|Q9FJF7\|SAU22_ARATH	9.6e-22	69.70	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
sp\|Q9FJF9\|SAU21_ARATH	1.6e-21	69.70	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
sp\|Q9FJF6\|SAU23_ARATH	1.6e-21	70.77	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 S...	[more]

BLAST of Cla97C11G210370 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	1.4e-26	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.0e-25	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	2.0e-25	57.14	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	3.4e-25	55.56	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	6.3e-24	61.90	SAUR-like auxin-responsive protein family	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C11G210370.1	Cla97C11G210370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..93 e-value: 3.0E-26 score: 91.3
None	No IPR available	PANTHER	PTHR31929:SF26	SUBFAMILY NOT NAMED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..95

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C11G210370	Bhi10G001528	Wax gourd	wgowmbB352

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C11G210370	Watermelon (97103) v2	wmbwmbB065
Cla97C11G210370	Cucumber (Gy14) v2	cgybwmbB105
Cla97C11G210370	Cucumber (Gy14) v1	cgywmbB304
Cla97C11G210370	Cucumber (Gy14) v1	cgywmbB305
Cla97C11G210370	Cucurbita maxima (Rimu)	cmawmbB567
Cla97C11G210370	Cucurbita maxima (Rimu)	cmawmbB613
Cla97C11G210370	Cucurbita moschata (Rifu)	cmowmbB544
Cla97C11G210370	Cucurbita moschata (Rifu)	cmowmbB587
Cla97C11G210370	Wild cucumber (PI 183967)	cpiwmbB112
Cla97C11G210370	Wild cucumber (PI 183967)	cpiwmbB543
Cla97C11G210370	Cucumber (Chinese Long) v3	cucwmbB115
Cla97C11G210370	Cucumber (Chinese Long) v3	cucwmbB539
Cla97C11G210370	Cucumber (Chinese Long) v2	cuwmbB110
Cla97C11G210370	Cucumber (Chinese Long) v2	cuwmbB519
Cla97C11G210370	Bottle gourd (USVL1VR-Ls)	lsiwmbB043
Cla97C11G210370	Melon (DHL92) v3.6.1	medwmbB081
Cla97C11G210370	Melon (DHL92) v3.6.1	medwmbB084
Cla97C11G210370	Melon (DHL92) v3.6.1	medwmbB162
Cla97C11G210370	Melon (DHL92) v3.5.1	mewmbB088
Cla97C11G210370	Melon (DHL92) v3.5.1	mewmbB176
Cla97C11G210370	Watermelon (Charleston Gray)	wcgwmbB065
Cla97C11G210370	Watermelon (97103) v1	wmwmbB315
Cla97C11G210370	Watermelon (97103) v1	wmwmbB361