Cla97C10G201900 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C10G201900
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ABC transporter B family member 29, chloroplastic
Location	Cla97Chr10 : 31895376 .. 31896202 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCATCGCTCTGCAATCTTCTCTTCTTCTTTCGAGAACTCAGATTCTTTTCTTCAATCCCAAACCAATTTCTCTTCATTTCTCCAGATTCAAACCCAAATTCCCATCTCTTTGTATCCCTACTAAACCATTAGCATTCAAATGCGTCAATTCCACCAATTCTTCTAACCCCACAATCGAACATCTTCAATCCCAAACGCATCGGCCTCGTCTTCGCAGTTTTCAGACGTTCAAAGCCCTAATTCCCTATATTCTTGCCCAGCGTAAGCATATCCTTGCCGGTTGGCTCTGTAGTATTGCCTCCGTTTTCTCTCTATCCCTACTCGTGCCTAAGATTGGGAAATTATCTTCGATTATAGACAAGATCGATGCAATCAAGTTGTGGGATCAGGGTCTGGTTTTGGGGATTTTGGTGTTCGCTCGTTTCGTTGCTAGTTACTGTCAAGAAGCCTTCATTTGGGATGCGGCGTTGAATGCTATTTACGAAATCCGTGTTCGTGTTTTCGAGAGAGTTCTGGCTATGGACTTGGATTTCTTTGAAGGTGGAACTGGTGTTTCTGCTGGCGATATTGCTTACAGGATCACCGCGGAAGCCTCGGATGTGGCGGATACTGTGTATTCTCTCCTGAATGTGAGTGAAATCGTGTTTAATATCTCCCTTTTTGCAGATTCCTCTTTCAACTTCAACTCGTGGATGGTTAACTACATGTAATGTGAATTTTAGTGAACTAGTATAATTTGAATGTTTTAGAAATGGAAATTTATTCATTTGGTTCTTAACTTTTTAGTTTTTATTTGTAGCTTCATTTATATTACAGACCGTAG

mRNA sequence

ATGTGCATCGCTCTGCAATCTTCTCTTCTTCTTTCGAGAACTCAGATTCTTTTCTTCAATCCCAAACCAATTTCTCTTCATTTCTCCAGATTCAAACCCAAATTCCCATCTCTTTGTATCCCTACTAAACCATTAGCATTCAAATGCGTCAATTCCACCAATTCTTCTAACCCCACAATCGAACATCTTCAATCCCAAACGCATCGGCCTCGTCTTCGCAGTTTTCAGACGTTCAAAGCCCTAATTCCCTATATTCTTGCCCAGCGTAAGCATATCCTTGCCGGTTGGCTCTGTAGTATTGCCTCCGTTTTCTCTCTATCCCTACTCGTGCCTAAGATTGGGAAATTATCTTCGATTATAGACAAGATCGATGCAATCAAGTTGTGGGATCAGGGTCTGGTTTTGGGGATTTTGGTGTTCGCTCGTTTCGTTGCTAGTTACTGTCAAGAAGCCTTCATTTGGGATGCGGCGTTGAATGCTATTTACGAAATCCGTGTTCGTGTTTTCGAGAGAGTTCTGGCTATGGACTTGGATTTCTTTGAAGGTGGAACTGGTGTTTCTGCTGGCGATATTGCTTACAGGATCACCGCGGAAGCCTCGGATGTGGCGGATACTGTGTATTCTCTCCTGAATCTTCATTTATATTACAGACCGTAG

Coding sequence (CDS)

ATGTGCATCGCTCTGCAATCTTCTCTTCTTCTTTCGAGAACTCAGATTCTTTTCTTCAATCCCAAACCAATTTCTCTTCATTTCTCCAGATTCAAACCCAAATTCCCATCTCTTTGTATCCCTACTAAACCATTAGCATTCAAATGCGTCAATTCCACCAATTCTTCTAACCCCACAATCGAACATCTTCAATCCCAAACGCATCGGCCTCGTCTTCGCAGTTTTCAGACGTTCAAAGCCCTAATTCCCTATATTCTTGCCCAGCGTAAGCATATCCTTGCCGGTTGGCTCTGTAGTATTGCCTCCGTTTTCTCTCTATCCCTACTCGTGCCTAAGATTGGGAAATTATCTTCGATTATAGACAAGATCGATGCAATCAAGTTGTGGGATCAGGGTCTGGTTTTGGGGATTTTGGTGTTCGCTCGTTTCGTTGCTAGTTACTGTCAAGAAGCCTTCATTTGGGATGCGGCGTTGAATGCTATTTACGAAATCCGTGTTCGTGTTTTCGAGAGAGTTCTGGCTATGGACTTGGATTTCTTTGAAGGTGGAACTGGTGTTTCTGCTGGCGATATTGCTTACAGGATCACCGCGGAAGCCTCGGATGTGGCGGATACTGTGTATTCTCTCCTGAATCTTCATTTATATTACAGACCGTAG

Protein sequence

MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTIEHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSIIDKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFFEGGTGVSAGDIAYRITAEASDVADTVYSLLNLHLYYRP

Homology

[Close]

BLAST of Cla97C10G201900 vs. NCBI nr
Match: XP_023526541.1 (ABC transporter B family member 29, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 3.8e-91
Identity = 180/211 (85.31%), Postives = 190/211 (90.05%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           MCIALQSSLLLSR QIL FNPKPISLHFSRF+PK     I TKPLAF+ VNSTNSSNPTI
Sbjct: 1   MCIALQSSLLLSRNQILLFNPKPISLHFSRFEPKITKFHIRTKPLAFESVNSTNSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           E  +SQ++RP LRSFQTFK+LIPYIL+QRKHIL GWLCSI SVFSLSLLVPKIGK SSII
Sbjct: 61  EDSESQSNRPLLRSFQTFKSLIPYILSQRKHILGGWLCSIVSVFSLSLLVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DKIDA  L D+GLVLGILVFARFVASYCQEA IWDAALNAIYEIRVRVFERVLAMDL+FF
Sbjct: 121 DKIDATNLLDEGLVLGILVFARFVASYCQEALIWDAALNAIYEIRVRVFERVLAMDLEFF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EG  GVSAGDIAYRITAEASDVADT+YSLLN
Sbjct: 181 EGVNGVSAGDIAYRITAEASDVADTMYSLLN 211

[Close]

BLAST of Cla97C10G201900 vs. NCBI nr
Match: XP_022934105.1 (ABC transporter B family member 29, chloroplastic [Cucurbita moschata])

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 181/211 (85.78%), Postives = 191/211 (90.52%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           MCIALQSS LLSR QIL FNPKPISLHFSRF+PK  S  I TKPLAF+ VNSTNSSNPTI
Sbjct: 1   MCIALQSS-LLSRNQILLFNPKPISLHFSRFEPKITSFHIRTKPLAFESVNSTNSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           E  +SQ++RP LRSFQTFK+LIP+IL+QRKHIL GWLCSI SVFSLSLLVPKIGK SSII
Sbjct: 61  EDSESQSNRPLLRSFQTFKSLIPHILSQRKHILGGWLCSIVSVFSLSLLVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DKIDA  L D+GLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDL+FF
Sbjct: 121 DKIDATNLLDEGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLEFF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EG  GVSAGDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGVNGVSAGDIAYRITAEASDVADTVYSLLN 210

[Close]

BLAST of Cla97C10G201900 vs. NCBI nr
Match: XP_022982879.1 (ABC transporter B family member 29, chloroplastic [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 2.5e-90
Identity = 180/211 (85.31%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           MCIALQSS LLSR QIL FNP PISLHFSRF PK  +  I TKPLAF+ VNSTNSSNPTI
Sbjct: 1   MCIALQSS-LLSRNQILLFNPIPISLHFSRFDPKITNFHIRTKPLAFESVNSTNSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           E+ +SQ++RP LRSFQTFK+LIPYIL+QRKHIL GWLCSI SVFSLSLLVPKIGK SSII
Sbjct: 61  ENSESQSNRPLLRSFQTFKSLIPYILSQRKHILGGWLCSIVSVFSLSLLVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DKIDA  LW +GLVLGILVFARF ASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF
Sbjct: 121 DKIDATNLWGEGLVLGILVFARFAASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EG  GVSAGDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGVNGVSAGDIAYRITAEASDVADTVYSLLN 210

[Close]

BLAST of Cla97C10G201900 vs. NCBI nr
Match: XP_008442850.1 (PREDICTED: ABC transporter B family member 29, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87
Identity = 174/211 (82.46%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           M +A QSS  LS  QILF+N KPISLH SRF+ K P+L I TKPL FK   S NSSNPTI
Sbjct: 1   MFLARQSSPFLSNPQILFYNLKPISLHASRFESKIPNLRIHTKPLPFK---SINSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           EH QSQ+HRP LR+F TFK LIPYIL+QR HILAGWLCS+ SVFSLSL+VPKIGK SSII
Sbjct: 61  EHSQSQSHRPLLRTFHTFKTLIPYILSQRNHILAGWLCSVVSVFSLSLIVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DK+DAIKLWDQ LVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLD F
Sbjct: 121 DKVDAIKLWDQSLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDVF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EGGTGVS+GDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGGTGVSSGDIAYRITAEASDVADTVYSLLN 208

[Close]

BLAST of Cla97C10G201900 vs. NCBI nr
Match: XP_016899625.1 (PREDICTED: ABC transporter B family member 29, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87
Identity = 174/211 (82.46%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           M +A QSS  LS  QILF+N KPISLH SRF+ K P+L I TKPL FK   S NSSNPTI
Sbjct: 1   MFLARQSSPFLSNPQILFYNLKPISLHASRFESKIPNLRIHTKPLPFK---SINSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           EH QSQ+HRP LR+F TFK LIPYIL+QR HILAGWLCS+ SVFSLSL+VPKIGK SSII
Sbjct: 61  EHSQSQSHRPLLRTFHTFKTLIPYILSQRNHILAGWLCSVVSVFSLSLIVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DK+DAIKLWDQ LVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLD F
Sbjct: 121 DKVDAIKLWDQSLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDVF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EGGTGVS+GDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGGTGVSSGDIAYRITAEASDVADTVYSLLN 208

[Close]

BLAST of Cla97C10G201900 vs. TrEMBL
Match: tr|A0A1S3B673|A0A1S3B673_CUCME (ABC transporter B family member 29, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486620 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.2e-87
Identity = 174/211 (82.46%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           M +A QSS  LS  QILF+N KPISLH SRF+ K P+L I TKPL FK   S NSSNPTI
Sbjct: 1   MFLARQSSPFLSNPQILFYNLKPISLHASRFESKIPNLRIHTKPLPFK---SINSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           EH QSQ+HRP LR+F TFK LIPYIL+QR HILAGWLCS+ SVFSLSL+VPKIGK SSII
Sbjct: 61  EHSQSQSHRPLLRTFHTFKTLIPYILSQRNHILAGWLCSVVSVFSLSLIVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DK+DAIKLWDQ LVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLD F
Sbjct: 121 DKVDAIKLWDQSLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDVF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EGGTGVS+GDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGGTGVSSGDIAYRITAEASDVADTVYSLLN 208

[Close]

BLAST of Cla97C10G201900 vs. TrEMBL
Match: tr|A0A1S4DV91|A0A1S4DV91_CUCME (ABC transporter B family member 29, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486620 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.2e-87
Identity = 174/211 (82.46%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           M +A QSS  LS  QILF+N KPISLH SRF+ K P+L I TKPL FK   S NSSNPTI
Sbjct: 1   MFLARQSSPFLSNPQILFYNLKPISLHASRFESKIPNLRIHTKPLPFK---SINSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           EH QSQ+HRP LR+F TFK LIPYIL+QR HILAGWLCS+ SVFSLSL+VPKIGK SSII
Sbjct: 61  EHSQSQSHRPLLRTFHTFKTLIPYILSQRNHILAGWLCSVVSVFSLSLIVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DK+DAIKLWDQ LVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLD F
Sbjct: 121 DKVDAIKLWDQSLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDVF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EGGTGVS+GDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGGTGVSSGDIAYRITAEASDVADTVYSLLN 208

[Close]

BLAST of Cla97C10G201900 vs. TrEMBL
Match: tr|A0A0A0LEL5|A0A0A0LEL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777010 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 3.2e-86
Identity = 172/211 (81.52%), Postives = 185/211 (87.68%), Query Frame = 0


Query: 1   MCIALQSSLLLSRTQILFFNPKPISLHFSRFKPKFPSLCIPTKPLAFKCVNSTNSSNPTI 60
           M  ALQSSLLLS +Q LF N KPIS H SRF+ K P+L I TK L FK   S NSSNPTI
Sbjct: 1   MFTALQSSLLLSNSQFLFSNLKPISFHVSRFESKIPNLRIHTKLLPFK---SINSSNPTI 60

Query: 61  EHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSII 120
           EH QSQ++RP LR+F TFK L+PYIL+QRKHILAGWLCS+ SVFSLSL+VPKIGK SSII
Sbjct: 61  EHSQSQSYRPLLRTFHTFKTLVPYILSQRKHILAGWLCSVVSVFSLSLIVPKIGKFSSII 120

Query: 121 DKIDAIKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFF 180
           DK+DAIKLWDQ LVLG LVFARFVASYCQEAFIWDAALNAIYEIR+RVFERVLAMDLDFF
Sbjct: 121 DKVDAIKLWDQSLVLGSLVFARFVASYCQEAFIWDAALNAIYEIRLRVFERVLAMDLDFF 180

Query: 181 EGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           EGGTGVS+GDIAYRITAEASDVADTVYSLLN
Sbjct: 181 EGGTGVSSGDIAYRITAEASDVADTVYSLLN 208

[Close]

BLAST of Cla97C10G201900 vs. TrEMBL
Match: tr|A0A251N9N8|A0A251N9N8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G104700 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.7e-43
Identity = 102/196 (52.04%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 21  PKPISLHFSRFKP--KFPSLCIP---TKPLAFKCVNSTNSSNPTIEHLQSQTHRPRLRSF 80
           P P    + + KP   FP+L  P    KP   K  NSTN  +      + Q   P  ++F
Sbjct: 10  PSPPRSLYLKHKPLHPFPTLPKPKHSLKPSLHKSHNSTNVPSLLPATPKPQNDLPFSQTF 69

Query: 81  QTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSIIDKIDAIKLWDQGLVL 140
            +  +L PYIL+Q K IL GWLCS+ SV+SLS  VPKIGK S+ I+ +D I L ++GL +
Sbjct: 70  HSLTSLKPYILSQHKPILLGWLCSLVSVYSLSKTVPKIGKFSTFIENLDPITLKNEGLAV 129

Query: 141 GILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFFEGGTGVSAGDIAYRI 200
           G+LV AR VA Y Q+AF+WDAALN++Y +R  VFE+VL  DL+FFEG  GV +GDIAYRI
Sbjct: 130 GVLVLARLVAVYWQQAFLWDAALNSVYRVRAAVFEKVLERDLEFFEGYGGVLSGDIAYRI 189

Query: 201 TAEASDVADTVYSLLN 212
           TAEASD+ADTV++LLN
Sbjct: 190 TAEASDIADTVFALLN 205

[Close]

BLAST of Cla97C10G201900 vs. TrEMBL
Match: tr|F6HKM0|F6HKM0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03180 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.7e-43
Identity = 99/186 (53.23%), Postives = 132/186 (70.97%), Query Frame = 0


Query: 30  RFKPKFPSLCIPTKPLAFKCVNSTNSSNPTIEHLQSQTHRP----RLRSFQTFKALIPYI 89
           RFKP+      PTK  AF       S N T++     + +P       +F + +A+ PY+
Sbjct: 21  RFKPR------PTKLFAF-------SPNLTVKPSFKASLKPFNFISPSTFHSLEAIKPYV 80

Query: 90  LAQRKHILAGWLCSIASVFSLSLLVPKIGKLSSIIDKIDAIKLWDQGLVLGILVFARFVA 149
           L++ K IL GW CS+ SV+SLS +VPK+GK S+ + KIDAI L D+GLVLG+L+ AR VA
Sbjct: 81  LSEYKPILKGWFCSLVSVYSLSKIVPKVGKFSATLSKIDAIHLRDEGLVLGVLLLARLVA 140

Query: 150 SYCQEAFIWDAALNAIYEIRVRVFERVLAMDLDFFEGGTGVSAGDIAYRITAEASDVADT 209
           SY Q+AF+WDAALN++Y++RV  F++VL  DL+FFEGG  VS GDIAYR+TAEASDVADT
Sbjct: 141 SYWQQAFLWDAALNSVYKVRVFAFDKVLQRDLEFFEGGDAVSPGDIAYRMTAEASDVADT 193

Query: 210 VYSLLN 212
           V++LLN
Sbjct: 201 VHALLN 193

[Close]

BLAST of Cla97C10G201900 vs. Swiss-Prot
Match: sp|Q9LZB8|AB29B_ARATH (ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCB29 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.8e-34
Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 58  PTIEHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLS 117
           P+   L++ T    L++ +T K   PY+ ++ K +L GWLCS  SV SLS +VP++G  +
Sbjct: 45  PSALRLRANTTVNSLKALETIK---PYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSFT 104

Query: 118 SIIDKIDA--IKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAM 177
           S ++   A   KL  + LVL  LV A+ VA Y Q+AF+W+AALN +Y+IRV  + RVL  
Sbjct: 105 SNLNANAASLTKLKGECLVLAGLVLAKVVAYYLQQAFLWEAALNTVYKIRVFAYRRVLER 164

Query: 178 DLDFFEGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           +L+FFEGG G+S+GDIAYRITAEAS+VADT+Y+LLN
Sbjct: 165 ELEFFEGGNGISSGDIAYRITAEASEVADTIYALLN 197

[Close]

BLAST of Cla97C10G201900 vs. TAIR10
Match: AT5G03910.1 (ABC2 homolog 12)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-35
Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 0


Query: 58  PTIEHLQSQTHRPRLRSFQTFKALIPYILAQRKHILAGWLCSIASVFSLSLLVPKIGKLS 117
           P+   L++ T    L++ +T K   PY+ ++ K +L GWLCS  SV SLS +VP++G  +
Sbjct: 45  PSALRLRANTTVNSLKALETIK---PYLQSESKTVLLGWLCSCVSVVSLSQIVPRLGSFT 104

Query: 118 SIIDKIDA--IKLWDQGLVLGILVFARFVASYCQEAFIWDAALNAIYEIRVRVFERVLAM 177
           S ++   A   KL  + LVL  LV A+ VA Y Q+AF+W+AALN +Y+IRV  + RVL  
Sbjct: 105 SNLNANAASLTKLKGECLVLAGLVLAKVVAYYLQQAFLWEAALNTVYKIRVFAYRRVLER 164

Query: 178 DLDFFEGGTGVSAGDIAYRITAEASDVADTVYSLLN 212
           +L+FFEGG G+S+GDIAYRITAEAS+VADT+Y+LLN
Sbjct: 165 ELEFFEGGNGISSGDIAYRITAEASEVADTIYALLN 197

The following BLAST results are available for this feature:

BLAST of Cla97C10G201900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526541.1	3.8e-91	85.31	ABC transporter B family member 29, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022934105.1	2.5e-90	85.78	ABC transporter B family member 29, chloroplastic [Cucurbita moschata]	[more]
XP_022982879.1	2.5e-90	85.31	ABC transporter B family member 29, chloroplastic [Cucurbita maxima]	[more]
XP_008442850.1	3.3e-87	82.46	PREDICTED: ABC transporter B family member 29, chloroplastic isoform X1 [Cucumis...	[more]
XP_016899625.1	3.3e-87	82.46	PREDICTED: ABC transporter B family member 29, chloroplastic isoform X2 [Cucumis...	[more]

BLAST of Cla97C10G201900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B673\|A0A1S3B673_CUCME	2.2e-87	82.46	ABC transporter B family member 29, chloroplastic isoform X1 OS=Cucumis melo OX=...	[more]
tr\|A0A1S4DV91\|A0A1S4DV91_CUCME	2.2e-87	82.46	ABC transporter B family member 29, chloroplastic isoform X2 OS=Cucumis melo OX=...	[more]
tr\|A0A0A0LEL5\|A0A0A0LEL5_CUCSA	3.2e-86	81.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777010 PE=4 SV=1	[more]
tr\|A0A251N9N8\|A0A251N9N8_PRUPE	5.7e-43	52.04	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G104700 PE=4 SV=1	[more]
tr\|F6HKM0\|F6HKM0_VITVI	9.7e-43	53.23	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03180 PE=4 SV=...	[more]

BLAST of Cla97C10G201900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZB8\|AB29B_ARATH	3.8e-34	50.64	ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Cla97C10G201900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03910.1	2.1e-35	50.64	ABC2 homolog 12	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0042626	ATPase activity, coupled to transmembrane movement of substances
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR011527	ABC1_TM_dom
IPR036640	ABC1_TM_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006810	transport
biological_process	GO:0044765	single-organism transport
biological_process	GO:0006260	DNA replication
biological_process	GO:0008152	metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C10G201900.1	Cla97C10G201900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	G3DSA:1.20.1560.10		coord: 58..214 e-value: 1.2E-14 score: 56.2
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	SSF90123	ABC transporter transmembrane region	coord: 79..211
None	No IPR available	PANTHER	PTHR24221:SF112	ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC	coord: 50..211
None	No IPR available	PANTHER	PTHR24221	FAMILY NOT NAMED	coord: 50..211
IPR011527	ABC transporter type 1, transmembrane domain	PROSITE	PS50929	ABC_TM1F	coord: 116..211 score: 12.064

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C10G201900	Cla017682	Watermelon (97103) v1	wmwmbB051
Cla97C10G201900	Csa3G777010	Cucumber (Chinese Long) v2	cuwmbB186
Cla97C10G201900	MELO3C009480	Melon (DHL92) v3.5.1	mewmbB316
Cla97C10G201900	ClCG10G018880	Watermelon (Charleston Gray)	wcgwmbB038
Cla97C10G201900	CSPI03G35000	Wild cucumber (PI 183967)	cpiwmbB189
Cla97C10G201900	CmaCh14G003180	Cucurbita maxima (Rimu)	cmawmbB249
Cla97C10G201900	CmoCh14G003130	Cucurbita moschata (Rifu)	cmowmbB230
Cla97C10G201900	Lsi03G018830	Bottle gourd (USVL1VR-Ls)	lsiwmbB218
Cla97C10G201900	CsGy3G032450	Cucumber (Gy14) v2	cgybwmbB178
Cla97C10G201900	MELO3C009480.2	Melon (DHL92) v3.6.1	medwmbB305
Cla97C10G201900	Carg03664	Silver-seed gourd	carwmbB0254
Cla97C10G201900	CsaV3_3G037360	Cucumber (Chinese Long) v3	cucwmbB187
Cla97C10G201900	Bhi11G001930	Wax gourd	wgowmbB019

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C10G201900	Silver-seed gourd	carwmbB0636
Cla97C10G201900	Silver-seed gourd	carwmbB0840
Cla97C10G201900	Cucumber (Gy14) v2	cgybwmbB398
Cla97C10G201900	Cucumber (Gy14) v1	cgywmbB084
Cla97C10G201900	Cucumber (Gy14) v1	cgywmbB425
Cla97C10G201900	Cucurbita maxima (Rimu)	cmawmbB564
Cla97C10G201900	Cucurbita maxima (Rimu)	cmawmbB671
Cla97C10G201900	Cucurbita maxima (Rimu)	cmawmbB844
Cla97C10G201900	Cucurbita maxima (Rimu)	cmawmbB877
Cla97C10G201900	Cucurbita moschata (Rifu)	cmowmbB542
Cla97C10G201900	Cucurbita moschata (Rifu)	cmowmbB643
Cla97C10G201900	Cucurbita moschata (Rifu)	cmowmbB818
Cla97C10G201900	Cucurbita moschata (Rifu)	cmowmbB851
Cla97C10G201900	Wild cucumber (PI 183967)	cpiwmbB442
Cla97C10G201900	Cucumber (Chinese Long) v3	cucwmbB436
Cla97C10G201900	Cucumber (Chinese Long) v2	cuwmbB418
Cla97C10G201900	Bottle gourd (USVL1VR-Ls)	lsiwmbB040
Cla97C10G201900	Bottle gourd (USVL1VR-Ls)	lsiwmbB116
Cla97C10G201900	Melon (DHL92) v3.6.1	medwmbB510
Cla97C10G201900	Melon (DHL92) v3.5.1	mewmbB518
Cla97C10G201900	Watermelon (Charleston Gray)	wcgwmbB133
Cla97C10G201900	Watermelon (Charleston Gray)	wcgwmbB195
Cla97C10G201900	Watermelon (97103) v1	wmwmbB312
Cla97C10G201900	Watermelon (97103) v1	wmwmbB285
Cla97C10G201900	Wax gourd	wgowmbB410
Cla97C10G201900	Watermelon (97103) v2	wmbwmbB047
Cla97C10G201900	Watermelon (97103) v2	wmbwmbB052
Cla97C10G201900	Silver-seed gourd	carwmbB0154
Cla97C10G201900	Silver-seed gourd	carwmbB0240
Cla97C10G201900	Silver-seed gourd	carwmbB0437