Cla97C10G193160 (gene) Watermelon (97103) v2

NameCla97C10G193160
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
LocationCla97Chr10 : 21453666 .. 21454029 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTATTTTAATTCACTGCTTCTCTTCTGCTTTCGGTGTTTTGGTGTTGGATCGGAAGGTTTTGTGATGTGCGATTGTAGATCTGTGTGTGTTTTTTGTGTTGATTTAGGGTTTTGGTGGTGGTTTCTTTTCTAGGTTATCCACCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCTCCGCAGGGCTATCCTCCTCCTGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAA

mRNA sequence

ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTTATCCACCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCTCCGCAGGGCTATCCTCCTCCTGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAA

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTGCCTCCACCTCAAGGTTATCCACCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCTCCGCAGGGCTATCCTCCTCCTGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGCTCAGCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAA

Protein sequence

MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQPPPQQQSSGPGCLEGW
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G193160.1Cla97C10G193160.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00239RHODOPSNTAILcoord: 15..26
score: 77.78
coord: 28..40
score: 44.87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availablePANTHERPTHR31568:SF3CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-RELATEDcoord: 1..76
NoneNo IPR availablePANTHERPTHR31568FAMILY NOT NAMEDcoord: 1..76

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G193160Watermelon (97103) v2wmbwmbB048
Cla97C10G193160Silver-seed gourdcarwmbB0302
Cla97C10G193160Silver-seed gourdcarwmbB0391
Cla97C10G193160Cucumber (Gy14) v2cgybwmbB259
Cla97C10G193160Cucumber (Gy14) v2cgybwmbB491
Cla97C10G193160Cucumber (Gy14) v1cgywmbB393
Cla97C10G193160Cucumber (Gy14) v1cgywmbB514
Cla97C10G193160Cucurbita maxima (Rimu)cmawmbB332
Cla97C10G193160Cucurbita maxima (Rimu)cmawmbB524
Cla97C10G193160Cucurbita maxima (Rimu)cmawmbB713
Cla97C10G193160Cucurbita moschata (Rifu)cmowmbB316
Cla97C10G193160Cucurbita moschata (Rifu)cmowmbB505
Cla97C10G193160Cucurbita moschata (Rifu)cmowmbB684
Cla97C10G193160Wild cucumber (PI 183967)cpiwmbB278
Cla97C10G193160Wild cucumber (PI 183967)cpiwmbB285
Cla97C10G193160Wild cucumber (PI 183967)cpiwmbB542
Cla97C10G193160Cucumber (Chinese Long) v3cucwmbB273
Cla97C10G193160Cucumber (Chinese Long) v3cucwmbB280
Cla97C10G193160Cucumber (Chinese Long) v3cucwmbB537
Cla97C10G193160Cucumber (Chinese Long) v2cuwmbB271
Cla97C10G193160Cucumber (Chinese Long) v2cuwmbB278
Cla97C10G193160Cucumber (Chinese Long) v2cuwmbB518
Cla97C10G193160Bottle gourd (USVL1VR-Ls)lsiwmbB218
Cla97C10G193160Melon (DHL92) v3.6.1medwmbB160
Cla97C10G193160Melon (DHL92) v3.6.1medwmbB456
Cla97C10G193160Melon (DHL92) v3.5.1mewmbB174
Cla97C10G193160Melon (DHL92) v3.5.1mewmbB462
Cla97C10G193160Melon (DHL92) v3.5.1mewmbB463
Cla97C10G193160Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G193160Watermelon (Charleston Gray)wcgwmbB136
Cla97C10G193160Watermelon (97103) v1wmwmbB051
Cla97C10G193160Wax gourdwgowmbB001