Cla97C10G192830 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCCAAACTCATTACTTGACGAAGGAGAGGGAAGTCAGGAGGGACCAATTCCAACAGATAATGAGAATATTGATTTTGGGGAGACCTCCGATGCATTTACTACATGGAGGGATGATCTCGCGAATCAAATGTGGGCTGAATGGAATGCAAATTAATGACGCCAGTGGGCCCAACTTTTGTATAGTCCTTTTTGTTATGTATACAGTATTTGGTTCACGCCCGACGTGTATGTTTTGTATATTTTTTTTGTATAACACATGTTTATATTTCAATGTATAGTTTGAATGAAGTGATTCTTATTGTATACAGTCTCAATGGGTTAATGCTTGCTCCCCACACTACATCTTCATGTTCTAGCTTGATTGTGTTAAAATTATTTAATTTTAGATGGAAGCATCCGGATCACGTGCAAGAGCCACAAAACATATTTGGACGGATGAGGAGGACTGAATCCTCGTGGCGTGTTTGGTCCAATGTGTTCAGTCCGGGCATTGGGGAGCTGATAACGAGACTTTCCGACCTGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGGTAAGCCCACATTTGGAGTCAAGGGTCAGGACGTTGAAGAGACAGTACAGCGCGATCACTGAAATGTTAGGCACAGGATGTAGTGGGTTTGGTTGGAATGCAGAGCGCAAATGTATTTTCTTATTTCTTTTATTTATTTCTTTTTGTTTTAAATATGTCTTAACCATAACACATTTCACCTTTAACAGAGTCATTCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTTTGACGACTTGGCCATTGTATTCGGTAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCGGATCTGAACTTGTTGTGGACAAGGAGAACGAGGACATCTTGAATAACCAGTCCTCGGACTTTGAGAACTTCTATATTCGTGATCCACCTTTTGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCCGGCAGTAGAGGATCTGCGAGTAGCATGTCATCAAGAAGTAGGAGGTCCCAAAGTTCCTTGATTGGAGAGTACAGTGACTTGGTTCGAGAGGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGTCAAAATAA ATGGGCCCAAACTCATTACTTGACGAAGGAGAGGGAAGTCAGGAGGGACCAATTCCAACAGATAATGAGAATATTGATTTTGGGGAGACCTCCGATGCATTTACTACATGGAGGGATGATCTCGCGAATCAAATTCTCAATGGGTTAATGCTTGCTCCCCACACTACATCTTCATGTTCTAGCTTGATTTCCGGGCATTGGGGAGCTGATAACGAGACTTTCCGACCTGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGAGTCATTCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTTTGACGACTTGGCCATTGTATTCGGTAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCGGATCTGAACTTGTTGTGGACAAGGAGAACGAGGACATCTTGAATAACCAGTCCTCGGACTTTGAGAACTTCTATATTCGTGATCCACCTTTTGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCCGGCAGTAGAGGATCTGCGAGTAGCATGTCATCAAGAAGTAGGAGGTCCCAAAGTTCCTTGATTGGAGAGTACAGTGACTTGGTTCGAGAGGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGTCAAAATAA ATGGGCCCAAACTCATTACTTGACGAAGGAGAGGGAAGTCAGGAGGGACCAATTCCAACAGATAATGAGAATATTGATTTTGGGGAGACCTCCGATGCATTTACTACATGGAGGGATGATCTCGCGAATCAAATTCTCAATGGGTTAATGCTTGCTCCCCACACTACATCTTCATGTTCTAGCTTGATTTCCGGGCATTGGGGAGCTGATAACGAGACTTTCCGACCTGGATTCCTAGCGAACATACTGCGGATGATGCAGCAGAGGATTCCAGGGTGTTCCATACAGAGTCATTCGAGTGCAAAAGGACTGCGACATAAGTCATTTCCGTTCTTTGACGACTTGGCCATTGTATTCGGTAAAGATAGAGCCACAGGAAGTCGTGCAACCACCACTGCAGAGGTCGGATCTGAACTTGTTGTGGACAAGGAGAACGAGGACATCTTGAATAACCAGTCCTCGGACTTTGAGAACTTCTATATTCGTGATCCACCTTTTGTCAACTCTCCCACATCAGAGGACACTCCAACTACCCCCGGCAGTAGAGGATCTGCGAGTAGCATGTCATCAAGAAGTAGGAGGTCCCAAAGTTCCTTGATTGGAGAGTACAGTGACTTGGTTCGAGAGGGATTCCAACTTCTGACGAAGTCCATTGACGGCATTGCACAGTCAAAATAA MGPNSLLDEGEGSQEGPIPTDNENIDFGETSDAFTTWRDDLANQILNGLMLAPHTTSSCSSLISGHWGADNETFRPGFLANILRMMQQRIPGCSIQSHSSAKGLRHKSFPFFDDLAIVFGKDRATGSRATTTAEVGSELVVDKENEDILNNQSSDFENFYIRDPPFVNSPTSEDTPTTPGSRGSASSMSSRSRRSQSSLIGEYSDLVREGFQLLTKSIDGIAQSK
BLAST of Cla97C10G192830 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 90.9 bits (224), Expect = 6.0e-15 Identity = 59/210 (28.10%), Postives = 90/210 (42.86%), Query Frame = 0
BLAST of Cla97C10G192830 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-12 Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 0
BLAST of Cla97C10G192830 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]) HSP 1 Score: 82.0 bits (201), Expect = 2.8e-12 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 0
BLAST of Cla97C10G192830 vs. NCBI nr
Match: XP_024022021.1 (uncharacterized protein LOC112091787 [Morus notabilis]) HSP 1 Score: 79.7 bits (195), Expect = 1.4e-11 Identity = 54/182 (29.67%), Postives = 82/182 (45.05%), Query Frame = 0
BLAST of Cla97C10G192830 vs. NCBI nr
Match: XP_008462939.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]) HSP 1 Score: 75.1 bits (183), Expect = 3.4e-10 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 4.0e-15 Identity = 59/210 (28.10%), Postives = 90/210 (42.86%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.8e-12 Identity = 46/127 (36.22%), Postives = 61/127 (48.03%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TrEMBL
Match: tr|A0A1S3CI24|A0A1S3CI24_CUCME (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103501201 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10 Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10 Identity = 42/117 (35.90%), Postives = 56/117 (47.86%), Query Frame = 0
BLAST of Cla97C10G192830 vs. TAIR10
Match: AT5G27260.1 (unknown protein) HSP 1 Score: 42.0 bits (97), Expect = 5.8e-04 Identity = 27/90 (30.00%), Postives = 45/90 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |