Cla97C10G192570 (gene) Watermelon (97103) v2

NameCla97C10G192570
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionClassical arabinogalactan protein 1
LocationCla97Chr10 : 20205105 .. 20205488 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTTTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCATCTCCGGCGACCTCTCCGGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGCGTTCGGATCTGTGGCCGTTGTGCTATACGCCGTCCTTTTGATGATCTGA

mRNA sequence

ATGGCGATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTTTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCATCTCCGGCGACCTCTCCGGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGCGTTCGGATCTGTGGCCGTTGTGCTATACGCCGTCCTTTTGATGATCTGA

Coding sequence (CDS)

ATGGCGATTAGAAGTCTTGCGGCGATGCTTTTAGTTGCATTGTTGATTGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTTTCTCCGAGCAAATCACCATCGAAGGCTCCATCAGCGTCTCCGTCTGTTAAGTCGCCGAAATCCTCTCCGGCAGCCGCACCTACTCCGTCCTCTCTGAAGTCTCCACCATCTCCTCCGTCTACATCGCCGTCTACTTCTCCATCTCCGGCGACCTCTCCGGCGACCTCTCCTTCCTCGATCTCCTCACCGCCCGCTGATGCTCCTGCTCCGTCAGGTAACGGCGCCGCTTCGATCCCTTTCTCGGCGTTCGGATCTGTGGCCGTTGTGCTATACGCCGTCCTTTTGATGATCTGA

Protein sequence

MAIRSLAAMLLVALLIGSAIAQSPAASPSFSPSKSPSKAPSASPSVKSPKSSPAAAPTPSSLKSPPSPPSTSPSTSPSPATSPATSPSSISSPPADAPAPSGNGAASIPFSAFGSVAVVLYAVLLMI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G192570.1Cla97C10G192570.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96
NoneNo IPR availablePANTHERPTHR36321FAMILY NOT NAMEDcoord: 1..125

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None