Cla97C10G188870 (gene) Watermelon (97103) v2

NameCla97C10G188870
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr10 : 4973776 .. 4974554 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCCACAGTCAGTGAAAAGCCACAAGAAAATGTAAGACTAGGCTTCATTTTTGGTACGAACACTGGCTCTGCCTCATTGTTGAGAATCTGTAGGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGGTTTGCACAGCTCAGTCCGACAAGTAAGAGCTTCCTCATTTCTTCTTCCCTGAACTCTCCGTTCAACCTTTTATCAGCTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACGTCAGTTTTCTCAGTCGCTTTCCCATATTGAAGATACTCAGGTGCAAGGTATCCCATTGTTCCTGCAGTTAGAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCGTCTTTATATCTCTGTGGATGACTTGCTGCTCACATTCCTGATGTAGATATGTCAGCACAGATGCCAATCCAACAGCAACATTGTATCTGTGAGACCAGTTTAACAAGCTAGCTTCTCCAGATTCTTGGTAAAGCAGCCTATCAAGGCTCCCGTTCGGCATAAAGTCATAAACGAGAAGCAATTCACCTTTCTCAACGCACCAACCTTGGAGCTGAACCAAATTCTTGTGCCTCAACCGAGCTATGATCGACAACTCGGCTAG

mRNA sequence

ATGTCATCCACAGTCAGTGAAAAGCCACAAGAAAATGTAAGACTAGGCTTCATTTTTGGTACGAACACTGGCTCTGCCTCATTGTTGAGAATCTGTAGGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGCTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCGTCTTTATATCTCTGTGGATGACTTGCTGCTCACATTCCTGATATTCTTGGTAAAGCAGCCTATCAAGGCTCCCGTTCGGCATAAAGTCATAAACGAGAAGCAATTCACCTTTCTCAACGCACCAACCTTGGAGCTGAACCAAATTCTTGTGCCTCAACCGAGCTATGATCGACAACTCGGCTAG

Coding sequence (CDS)

ATGTCATCCACAGTCAGTGAAAAGCCACAAGAAAATGTAAGACTAGGCTTCATTTTTGGTACGAACACTGGCTCTGCCTCATTGTTGAGAATCTGTAGGACCTTCCTCATCGAAGGTCTTGCCGAGCTATCCGGCTGCTTCAATGATCTTGCCTTGAGAATGCAATCCCCAAACCCAATCTACCAGATTGACCATCTTTTGAGTACCTGGTTCTCTTTCAATCGGCCTCCTCCCACACGTCACTTCAAGGATAACCACTCCATAGCTGAAGACAGTCGAAACCGGGCTCTTGTCATGATCCATGAGCTTCGCCAATCCAAAATCGCCCAATCTTGCATTGAAGTTCCCGTCCAGCAGTACGTTACCCGTCTTTATATCTCTGTGGATGACTTGCTGCTCACATTCCTGATATTCTTGGTAAAGCAGCCTATCAAGGCTCCCGTTCGGCATAAAGTCATAAACGAGAAGCAATTCACCTTTCTCAACGCACCAACCTTGGAGCTGAACCAAATTCTTGTGCCTCAACCGAGCTATGATCGACAACTCGGCTAG

Protein sequence

MSSTVSEKPQENVRLGFIFGTNTGSASLLRICRTFLIEGLAELSGCFNDLALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNHSIAEDSRNRALVMIHELRQSKIAQSCIEVPVQQYVTRLYISVDDLLLTFLIFLVKQPIKAPVRHKVINEKQFTFLNAPTLELNQILVPQPSYDRQLG
BLAST of Cla97C10G188870 vs. NCBI nr
Match: RDY09399.1 (hypothetical protein CR513_06229, partial [Mucuna pruriens])

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13
Identity = 51/122 (41.80%), Postives = 65/122 (53.28%), Query Frame = 0

Query: 40  LAELSGCFNDLALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNHSIAE--------- 99
           +  L    NDL LR++SPNP+ +I HL     SFN PP T H K NH IAE         
Sbjct: 96  IQSLVSSLNDLPLRVKSPNPVNEIHHLRP--LSFNWPPCTSHLKHNHPIAENISLVSGLT 155

Query: 100 ---------------DSRNRALVMIHELRQSKIAQSCIEVPVQQYVTRLYISVDDLLLTF 138
                          +  +RAL+MIHEL QSKI Q  +EVP+QQYV    + ++D LL F
Sbjct: 156 ILKILGCKVAHCSSSECGHRALIMIHELSQSKIPQPRVEVPIQQYVGSFNVPMNDSLLAF 215

BLAST of Cla97C10G188870 vs. NCBI nr
Match: PON72274.1 (hypothetical protein PanWU01x14_066650 [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 9.8e-08
Identity = 50/183 (27.32%), Postives = 85/183 (46.45%), Query Frame = 0

Query: 49  DLALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNH----SIAEDSRN---------- 108
           DL LR++ P+P+ Q   LL      NRPPP RH + +H     +A   R           
Sbjct: 72  DLPLRIKVPHPVDQ-HRLLLHHVHLNRPPPARHLQHHHPKAVHVARSRRRRHSRKLRRQV 131

Query: 109 ----------RALVMIHELRQSKIAQSCIEVPVQQYVTRLYISVDDLLLTFLIFLVK--- 168
                     R L ++ +L + ++A+    + V+QYV RL +SVD+ L+  ++ +++   
Sbjct: 132 PQGPDYPRRVRDLPVLVKLCEPEVAEPAAHLRVEQYVARLNVSVDNHLVPAMVEVIQALS 191

Query: 169 ---------------------QPIKAPVRHKVINEKQFTFLNAPTLELNQILVPQPSYDR 184
                                  ++AP+ H V++E +   L+AP   L+Q+LV +PS+ R
Sbjct: 192 HVGEHAPPLIPAEKLLGSVEDPAVEAPIGHVVVHEHELVPLSAPASHLDQVLVLKPSHAR 251

BLAST of Cla97C10G188870 vs. NCBI nr
Match: RDX83279.1 (hypothetical protein CR513_35818, partial [Mucuna pruriens])

HSP 1 Score: 64.7 bits (156), Expect = 3.7e-07
Identity = 53/168 (31.55%), Postives = 83/168 (49.40%), Query Frame = 0

Query: 40  LAELSGCFND----LALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNH----SIAED 99
           L + SGCF+     + +RM +  P              ++ PP+ H + +H     I+ D
Sbjct: 56  LLKNSGCFSYSWPLVIVRMNTKKP--------------HKLPPSSHLQHHHPKAVHISLD 115

Query: 100 SRN---------------------RALVMIHELRQSKIAQSCIEVPVQQYVTRLYISVDD 159
           SRN                     RA  M+  LR+ KI +  IE+ ++ YV  L+I ++D
Sbjct: 116 SRNTRINIFRSKIPHCPCRYSSIPRATTMLIHLRKPKIPKLGIEIGIKHYVAGLHIPMND 175

Query: 160 LLLTFLIFLVKQPIKAPVRHKVINEKQFTFLNAPTLELNQILVPQPSY 179
           L LT    LVK+ ++AP+  ++INE Q   L AP L+LN+ILV Q ++
Sbjct: 176 LPLT---LLVKKLVEAPIGEELINEDQLIPLTAPALKLNEILVAQVTH 206

BLAST of Cla97C10G188870 vs. NCBI nr
Match: RDX61632.1 (hypothetical protein CR513_60121, partial [Mucuna pruriens])

HSP 1 Score: 53.5 bits (127), Expect = 8.6e-04
Identity = 31/75 (41.33%), Postives = 39/75 (52.00%), Query Frame = 0

Query: 27  SLLRICRT-----------FLIEGLAELSGCFNDLALRMQSPNPIYQIDHLLSTWFSFNR 86
           S +R+C T           FL   +     C ND  L +Q+PNPI+QI HL+    S N 
Sbjct: 63  STIRVCTTQPQKQKLLHFPFLKLPIQPSISCLNDPPLGVQAPNPIHQIHHLV-LLLSLNW 122

Query: 87  PPPTRHFKDNHSIAE 91
           PPPT H K +H IAE
Sbjct: 123 PPPTSHLKHHHPIAE 136

BLAST of Cla97C10G188870 vs. TrEMBL
Match: tr|A0A2P5DG59|A0A2P5DG59_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_066650 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.5e-08
Identity = 50/183 (27.32%), Postives = 85/183 (46.45%), Query Frame = 0

Query: 49  DLALRMQSPNPIYQIDHLLSTWFSFNRPPPTRHFKDNH----SIAEDSRN---------- 108
           DL LR++ P+P+ Q   LL      NRPPP RH + +H     +A   R           
Sbjct: 72  DLPLRIKVPHPVDQ-HRLLLHHVHLNRPPPARHLQHHHPKAVHVARSRRRRHSRKLRRQV 131

Query: 109 ----------RALVMIHELRQSKIAQSCIEVPVQQYVTRLYISVDDLLLTFLIFLVK--- 168
                     R L ++ +L + ++A+    + V+QYV RL +SVD+ L+  ++ +++   
Sbjct: 132 PQGPDYPRRVRDLPVLVKLCEPEVAEPAAHLRVEQYVARLNVSVDNHLVPAMVEVIQALS 191

Query: 169 ---------------------QPIKAPVRHKVINEKQFTFLNAPTLELNQILVPQPSYDR 184
                                  ++AP+ H V++E +   L+AP   L+Q+LV +PS+ R
Sbjct: 192 HVGEHAPPLIPAEKLLGSVEDPAVEAPIGHVVVHEHELVPLSAPASHLDQVLVLKPSHAR 251

BLAST of Cla97C10G188870 vs. TrEMBL
Match: tr|K7KBM8|K7KBM8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G300800 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.7e-04
Identity = 29/65 (44.62%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 1  MSSTVSE--KPQENVRLGFIFGTNTGSASLLRICRTFLIEGLAELSGCFNDLALRMQSPN 60
          MSS V    + +E V +GF F T +G+A+LLRIC T L+EGL+ LSG    L L   S N
Sbjct: 1  MSSIVRSRGRSEEKVSVGFTFSTTSGAATLLRICSTLLMEGLSALSGLATQLNLISSSSN 60

Query: 61 PIYQI 64
            + +
Sbjct: 61 SPFNL 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RDY09399.16.0e-1341.80hypothetical protein CR513_06229, partial [Mucuna pruriens][more]
PON72274.19.8e-0827.32hypothetical protein PanWU01x14_066650 [Parasponia andersonii][more]
RDX83279.13.7e-0731.55hypothetical protein CR513_35818, partial [Mucuna pruriens][more]
RDX61632.18.6e-0441.33hypothetical protein CR513_60121, partial [Mucuna pruriens][more]
Match NameE-valueIdentityDescription
tr|A0A2P5DG59|A0A2P5DG59_PARAD6.5e-0827.32Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_066650 PE... [more]
tr|K7KBM8|K7KBM8_SOYBN9.7e-0444.62Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_02G300800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G188870.1Cla97C10G188870.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None