Cla97C10G187300 (gene) Watermelon (97103) v2

NameCla97C10G187300
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionHeavy metal transport/detoxification superfamily protein
LocationCla97Chr10 : 2958647 .. 2960811 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCTTCTGTAAGATTTTTCAATTATATTATTGCTTTCTTTCACTCTCTCTTTTTCTTAGTTTGACGTTATTCTGAAAATTTGAATATTTGACATCTAGATCGATCTAAAATACATGTTTTCTTTAGGGATATAAGAGATGTATAATAATGTTTTTGTTTGTTTGATATATAGTTTCAGGTGATTGTTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGGTTGGTATTTTTCATTATTTATTGATTTGCTTCTTCACTTCTTCCTTCTTCTTTTAACATAATTTAAACCTAATTTCGAATTTAAAAAAATATGATCTTTTTCTTTCGTTTTACTTTAAAAGTAGTCAATGTAATTTTCATAGTTTGTTATATTATATAATATTTAAATTAATTAGGATTGATGTGATTTCAAATATTGAGTGAAGTGGAAGATTCAAACTTCAAATCTTTTGATCGAGTGCATATATTTTAATTAGTTACACTCTGCTTAAGTTAGTTGTATAGTTTCTTGTTATCTCTTGATTAATATCACAGTATTCCCTAAAGTTTAAGAATGCAATTTAAACTTTTGAATTTTTAGAAACTTCATTTTTTAAGTTTAAACAATATACATATGATGAGAGGATTCAAATATTTATAGGGTCTGGTTGGTAGAGAATTCAAATTCTATTTTAGGTCTTCAAATTCATTGAGTTAAACAAATATGTTTTTTGTAGACAACTCGAATTTTGTTTCTAAATACTTCTGTGGTCCAAGTAGTGCAAATTCTAAAATCAATATATTTTTTTTATTACAGTACACAAAAGTCAAGGGATTTAAACTTCCAACTTTAAAATAGGTAGTAATACATGTCAATTATCATTAAACTATGCTTAACTTTGACAGGTAAATGACAATATTCCTATTGGTATAAGACATCTTGAATGAAACTTGAAGTAAATATATGCATGTCTTAAACACAAAAAAGATATAGCAGTCAATTGTGGAAATGATAGATTATCCTTATAAGTAGTGATATTAGATTAGTCATGTCTTGGCCTCCTCCATGGAGTTCATAACAAAAAATAACAAAAAAAAACTGTGGGACTCTTGAAAATATATAACTGTAAGGCCCTAAGGTTCAAGATTCGAAATAGGATTGATAATCTAAATTCAACACTTGATAGTCTCGACATTTTCCTACATCTACTGCCACCTGATAATGCCATCCTCTCCTATCTTGAATTGCTTTTAAGATGAAGACTATTCCCACAAATTGACATAAATCCTTTTGACATACTTTGTCCTCACTCACATGCTACTTAGAAAAGTTTTTAAGAGGTTGTCTAGCAAAAATTGCTCCAAATAAAACACGCTTAACTGTGAAGTTCCTATGATTGGGCTCCGAAGAGGAGTGTGCACCTTATTAATATAGGTGCTAAATATCAATTCTTTTAAGCAATTTTTGAACCATATTTTCATATTCTTAAAATTCCTCATATTCAATATGATCTTGGTTCGTTTTTATCATCCTCCTAAACTTAGGGCATTACAAACCTTCTGGGCATTACAAACCTTCTATAAAAAATGTAGGATTAATGTAGGATTATAAAAAAAAAAAAAAAAAGAAAAGAAAAAATCTTCCTTTGAAGAGGGAGGATTATAGAAAATAGGAATAACCTAAATAGAAAGAGATACATCTATGAAAAAAGCAAGCAACATCTTACATCGACAAAATATGAGGAAGATCCATGATATATATATAGTTGCAAAGAGCAAAATATTTACGATATTTGAAATTAGAAGTGAAGTAGGCCCAAAGTTTAATATTACACACATTTATGCTTTTCTTTTTCGCTCATTCTTCCACATCAATTTTCGAAAATTTTACGAAGAAATCATTATATGAACTTGCAAATTATACTTAAAAAAATTTCAAATGAAGTCATTATTCTTACTGTTGTTTGACCTTGAAAGTTTAGGCTTCCTTTCTAAACAATATATATATATTTTTCCTTTATATGCAGAATTGGTGGAGTTCACCATAGATGTGACAAAGAAACAAGTGATTGTAAAAGGAAATGCCAATTGCCAAATGCCAAAGCAAGAATGA

mRNA sequence

ATGGAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCTTCTTTTCAGGTGATTGTTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGAATTGGTGGAGTTCACCATAGATGTGACAAAGAAACAAGTGATTGTAAAAGGAAATGCCAATTGCCAAATGCCAAAGCAAGAATGA

Coding sequence (CDS)

ATGGAGCAATCTTTGTTATTTTCTGAGAATCTAACACCCCCTTCTTTTCAGGTGATTGTTATAAATGCAAATATGAGTTGCAATGGATGTCGCCAAAGAGTTTCTCAAATTGTCTCTAAAATGTCAGAATTGGTGGAGTTCACCATAGATGTGACAAAGAAACAAGTGATTGTAAAAGGAAATGCCAATTGCCAAATGCCAAAGCAAGAATGA

Protein sequence

MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGNANCQMPKQE
BLAST of Cla97C10G187300 vs. NCBI nr
Match: KGN55871.1 (hypothetical protein Csa_3G020590 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-24
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          M+QSLLFSENLTPP F+VIVINANMSCNGCRQRVSQIVSKMSEL E TIDVTKKQVIVKG
Sbjct: 2  MKQSLLFSENLTPPKFEVIVINANMSCNGCRQRVSQIVSKMSELAELTIDVTKKQVIVKG 61

Query: 61 NANCQMPKQE 71
          N  CQ   QE
Sbjct: 62 NVKCQSKNQE 71

BLAST of Cla97C10G187300 vs. NCBI nr
Match: XP_022965234.1 (uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima])

HSP 1 Score: 115.5 bits (288), Expect = 7.1e-23
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          MEQSLLFSE+LTPPSFQVIVINANMSCNGCRQRVSQ++SK+SELVEFTIDVTKKQV+VKG
Sbjct: 1  MEQSLLFSEDLTPPSFQVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60

Query: 61 NANCQ 66
          N   Q
Sbjct: 61 NVKFQ 65

BLAST of Cla97C10G187300 vs. NCBI nr
Match: XP_023553457.1 (uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 115.5 bits (288), Expect = 7.1e-23
Identity = 57/65 (87.69%), Postives = 62/65 (95.38%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          MEQSLLFSE+LTPPSFQVIVINANMSCNGCRQRVSQ++SK+SELVEFTIDVTKKQV+VKG
Sbjct: 1  MEQSLLFSEDLTPPSFQVIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60

Query: 61 NANCQ 66
          N   Q
Sbjct: 61 NVKFQ 65

BLAST of Cla97C10G187300 vs. NCBI nr
Match: XP_022154033.1 (uncharacterized protein LOC111021388 isoform X1 [Momordica charantia])

HSP 1 Score: 106.3 bits (264), Expect = 4.3e-20
Identity = 53/70 (75.71%), Postives = 59/70 (84.29%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          M+QSLLF ENLTPP FQVIVINANM CN CRQRVSQ++SKMSEL+E TIDVTK QV+VKG
Sbjct: 1  MKQSLLFYENLTPPLFQVIVINANMGCNRCRQRVSQLLSKMSELIEVTIDVTKNQVVVKG 60

Query: 61 NANCQMPKQE 71
          N   Q  K+E
Sbjct: 61 NIKFQSKKEE 70

BLAST of Cla97C10G187300 vs. NCBI nr
Match: XP_022965235.1 (uncharacterized protein LOC111465148 isoform X2 [Cucurbita maxima])

HSP 1 Score: 106.3 bits (264), Expect = 4.3e-20
Identity = 55/65 (84.62%), Postives = 60/65 (92.31%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          MEQSLLFSE+LTPPS  VIVINANMSCNGCRQRVSQ++SK+SELVEFTIDVTKKQV+VKG
Sbjct: 1  MEQSLLFSEDLTPPS--VIVINANMSCNGCRQRVSQLLSKISELVEFTIDVTKKQVVVKG 60

Query: 61 NANCQ 66
          N   Q
Sbjct: 61 NVKFQ 63

BLAST of Cla97C10G187300 vs. TrEMBL
Match: tr|A0A0A0L6W5|A0A0A0L6W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020590 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-24
Identity = 60/70 (85.71%), Postives = 62/70 (88.57%), Query Frame = 0

Query: 1  MEQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKG 60
          M+QSLLFSENLTPP F+VIVINANMSCNGCRQRVSQIVSKMSEL E TIDVTKKQVIVKG
Sbjct: 2  MKQSLLFSENLTPPKFEVIVINANMSCNGCRQRVSQIVSKMSELAELTIDVTKKQVIVKG 61

Query: 61 NANCQMPKQE 71
          N  CQ   QE
Sbjct: 62 NVKCQSKNQE 71

BLAST of Cla97C10G187300 vs. TrEMBL
Match: tr|I1MV03|I1MV03_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100804630 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0

Query: 2  EQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 61
          ++SLL  ENLT PSFQV+VI ANM CNGCR RVS++VSK++ L E+T+DV KK+V +KG+
Sbjct: 17 KRSLLHLENLTLPSFQVVVIAANMGCNGCRGRVSRVVSKITGLTEYTVDVRKKEVTIKGD 76

Query: 62 --ANCQMPKQ 70
            ANC    +
Sbjct: 77 FIANCNFQNE 86

BLAST of Cla97C10G187300 vs. TrEMBL
Match: tr|A0A2P4JMP8|A0A2P4JMP8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41818 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-13
Identity = 38/60 (63.33%), Postives = 50/60 (83.33%), Query Frame = 0

Query: 2  EQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 61
          E+SLL++ENLTPPSFQV+V+ ANM C  CRQRVSQ+ SKM+ L E+T+DV  +QVI+K +
Sbjct: 6  EKSLLYTENLTPPSFQVVVLTANMGCKRCRQRVSQVASKMTGLKEYTVDVHNRQVIMKAD 65

BLAST of Cla97C10G187300 vs. TrEMBL
Match: tr|A0A0R0JRD8|A0A0R0JRD8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G058600 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.8e-12
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 0

Query: 4  SLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMS-ELVEFTIDVTKKQVIVKGN- 63
          SLL  ENLT PSFQV+VI ANM CNGCR RVS++VSKM+  L E+T+DV KK+V +KG+ 
Sbjct: 11 SLLHLENLTLPSFQVVVIAANMGCNGCRGRVSRVVSKMTGRLTEYTVDVRKKEVTIKGDF 70

Query: 64 -ANCQMPKQ 70
           ANC    +
Sbjct: 71 IANCNFQNE 79

BLAST of Cla97C10G187300 vs. TrEMBL
Match: tr|A0A2I4GT51|A0A2I4GT51_9ROSI (uncharacterized protein LOC109010641 isoform X1 OS=Juglans regia OX=51240 GN=LOC109010641 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.3e-12
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = 0

Query: 2  EQSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 61
          E+SLL++ENLTPPSFQVIV+ ANM C+ CRQRVSQ+ SKM+ L E T+DV  ++V +K  
Sbjct: 6  ERSLLYAENLTPPSFQVIVMTANMGCDRCRQRVSQVASKMTGLEECTVDVQNRRVTMKAE 65

Query: 62 ANCQ 66
             Q
Sbjct: 66 FGFQ 69

BLAST of Cla97C10G187300 vs. TAIR10
Match: AT2G35730.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-10
Identity = 28/59 (47.46%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 3  QSLLFSENLTPPSFQVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 62
          ++L+  E L+ PSFQVI INA++ C  C+ RVS+IVSKM+ + E+ +D+ KK V+ +G+
Sbjct: 9  RTLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGD 67

BLAST of Cla97C10G187300 vs. TAIR10
Match: AT3G56240.1 (copper chaperone)

HSP 1 Score: 42.4 bits (98), Expect = 1.4e-04
Identity = 18/45 (40.00%), Postives = 29/45 (64.44%), Query Frame = 0

Query: 17 QVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 62
          Q +V+   MSC GC   V++++ KM  +  F ID+ +++V VKGN
Sbjct: 3  QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGN 47

BLAST of Cla97C10G187300 vs. TAIR10
Match: AT1G66240.1 (homolog of anti-oxidant 1)

HSP 1 Score: 39.7 bits (91), Expect = 8.9e-04
Identity = 16/45 (35.56%), Postives = 28/45 (62.22%), Query Frame = 0

Query: 17 QVIVINANMSCNGCRQRVSQIVSKMSELVEFTIDVTKKQVIVKGN 62
          Q +V+   M+C GC   V +++ KM  +  F +D+ +++V VKGN
Sbjct: 33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGN 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN55871.12.9e-2485.71hypothetical protein Csa_3G020590 [Cucumis sativus][more]
XP_022965234.17.1e-2387.69uncharacterized protein LOC111465148 isoform X1 [Cucurbita maxima][more]
XP_023553457.17.1e-2387.69uncharacterized protein LOC111810871 [Cucurbita pepo subsp. pepo][more]
XP_022154033.14.3e-2075.71uncharacterized protein LOC111021388 isoform X1 [Momordica charantia][more]
XP_022965235.14.3e-2084.62uncharacterized protein LOC111465148 isoform X2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
tr|A0A0A0L6W5|A0A0A0L6W5_CUCSA1.9e-2485.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020590 PE=4 SV=1[more]
tr|I1MV03|I1MV03_SOYBN2.6e-1358.57Uncharacterized protein OS=Glycine max OX=3847 GN=100804630 PE=4 SV=1[more]
tr|A0A2P4JMP8|A0A2P4JMP8_QUESU2.6e-1363.33Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41818 PE=4 SV=1[more]
tr|A0A0R0JRD8|A0A0R0JRD8_SOYBN2.8e-1260.87Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G058600 PE=4 SV=1[more]
tr|A0A2I4GT51|A0A2I4GT51_9ROSI6.3e-1259.38uncharacterized protein LOC109010641 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT2G35730.16.4e-1047.46Heavy metal transport/detoxification superfamily protein [more]
AT3G56240.11.4e-0440.00copper chaperone[more]
AT1G66240.18.9e-0435.56homolog of anti-oxidant 1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
IPR017969Heavy-metal-associated_CS
IPR006121HMA_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0009407 toxin catabolic process
biological_process GO:0046916 cellular transition metal ion homeostasis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046914 transition metal ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G187300.1Cla97C10G187300.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 24..62
e-value: 4.2E-7
score: 30.2
IPR006121Heavy metal-associated domain, HMAPROSITEPS50846HMA_2coord: 17..70
score: 8.542
IPR006121Heavy metal-associated domain, HMACDDcd00371HMAcoord: 23..63
e-value: 0.00209663
score: 30.6517
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 15..69
e-value: 7.0E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 10..69
NoneNo IPR availablePANTHERPTHR22814:SF78SUBFAMILY NOT NAMEDcoord: 10..69
IPR017969Heavy-metal-associated, conserved sitePROSITEPS01047HMA_1coord: 22..51
IPR036163Heavy metal-associated domain superfamilySUPERFAMILYSSF55008HMA, heavy metal-associated domaincoord: 15..63

The following gene(s) are paralogous to this gene:

None