Cla97C10G186740 (gene) Watermelon (97103) v2

Overview
NameCla97C10G186740
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr10 : 2209590 .. 2209876 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAGGAAGAAGAAGAAGTAAACGAAATTGGTTGTGATGGAATCGAGGTTCAGAGATTATAACAGGGTTTTAGGCATGGATCAATGGGCTGAAAATTGGAGGAGAAACAGCGAGGTTGGGCTACAAATTTCTCGATGATTCTTGGAACAGAGCAAATGGGAAGAAGGATGATGGAAGTGCCATTTGGATTAGTGTGAGTGGGAGAGAGCGCCAAAGCAAAAACAAGATTATAAAGAGAATGGAAAGAATTGGTAGAGAGGAAGAAAGTGGAATCCATGGCTGA

mRNA sequence

ATGGGTAAGGAAGAAGAAGAAGTAAACGAAATTGGTTGTGATGGAATCGAGGCATGGATCAATGGGCTGAAAATTGGAGGAGAAACAGCGAGGTTGGGCTACAAATTTCTCGATGATTCTTGGAACAGAGCAAATGGGAAGAAGGATGATGGAAGTGCCATTTGGATTAGTGTGAGTGGGAGAGAGCGCCAAAGCAAAAACAAGATTATAAAGAGAATGGAAAGAATTGGTAGAGAGGAAGAAAGTGGAATCCATGGCTGA

Coding sequence (CDS)

ATGGGTAAGGAAGAAGAAGAAGTAAACGAAATTGGTTGTGATGGAATCGAGGCATGGATCAATGGGCTGAAAATTGGAGGAGAAACAGCGAGGTTGGGCTACAAATTTCTCGATGATTCTTGGAACAGAGCAAATGGGAAGAAGGATGATGGAAGTGCCATTTGGATTAGTGTGAGTGGGAGAGAGCGCCAAAGCAAAAACAAGATTATAAAGAGAATGGAAAGAATTGGTAGAGAGGAAGAAAGTGGAATCCATGGCTGA

Protein sequence

MGKEEEEVNEIGCDGIEAWINGLKIGGETARLGYKFLDDSWNRANGKKDDGSAIWISVSGRERQSKNKIIKRMERIGREEESGIHG
Homology
[Close]
BLAST of Cla97C10G186740 vs. NCBI nr
Match: KGN55814.1 (hypothetical protein Csa_3G017080 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 9.6e-06
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 1  MGK-EEEEVNEIGCDGIEAWINGLKIGGETARLGYKFLDDSW--NRANGKKDDGSAIWIS 60
          MGK EEEEVN +GCD IE + +  ++      LG +   ++W  NR N KKDDGSAIWI 
Sbjct: 1  MGKEEEEEVNGMGCDRIEVYRDYERV------LGMEETAENWRRNRGNEKKDDGSAIWIR 59

Query: 61 VSGRE 63
          VSGRE
Sbjct: 61 VSGRE 59

[Close]
BLAST of Cla97C10G186740 vs. TrEMBL
Match: tr|A0A0A0L444|A0A0A0L444_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017080 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.4e-06
Identity = 35/65 (53.85%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 1  MGK-EEEEVNEIGCDGIEAWINGLKIGGETARLGYKFLDDSW--NRANGKKDDGSAIWIS 60
          MGK EEEEVN +GCD IE + +  ++      LG +   ++W  NR N KKDDGSAIWI 
Sbjct: 1  MGKEEEEEVNGMGCDRIEVYRDYERV------LGMEETAENWRRNRGNEKKDDGSAIWIR 59

Query: 61 VSGRE 63
          VSGRE
Sbjct: 61 VSGRE 59

The following BLAST results are available for this feature:
BLAST of Cla97C10G186740 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55814.19.6e-0653.85hypothetical protein Csa_3G017080 [Cucumis sativus][more]
BLAST of Cla97C10G186740 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L444|A0A0A0L444_CUCSA6.4e-0653.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017080 PE=4 SV=1[more]
BLAST of Cla97C10G186740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C10G186740 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G186740.1Cla97C10G186740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C10G186740Cucsa.321400Cucumber (Gy14) v1cgywmbB562
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G186740Melon (DHL92) v3.5.1mewmbB430
Cla97C10G186740Watermelon (97103) v2wmbwmbB054
Cla97C10G186740Watermelon (97103) v2wmbwmbB058
Cla97C10G186740Silver-seed gourdcarwmbB0586
Cla97C10G186740Silver-seed gourdcarwmbB0646
Cla97C10G186740Silver-seed gourdcarwmbB0736
Cla97C10G186740Silver-seed gourdcarwmbB0816
Cla97C10G186740Cucumber (Gy14) v2cgybwmbB174
Cla97C10G186740Cucumber (Gy14) v2cgybwmbB176
Cla97C10G186740Cucumber (Gy14) v1cgywmbB538
Cla97C10G186740Cucurbita maxima (Rimu)cmawmbB252
Cla97C10G186740Cucurbita maxima (Rimu)cmawmbB333
Cla97C10G186740Cucurbita maxima (Rimu)cmawmbB525
Cla97C10G186740Cucurbita maxima (Rimu)cmawmbB611
Cla97C10G186740Cucurbita maxima (Rimu)cmawmbB845
Cla97C10G186740Cucurbita moschata (Rifu)cmowmbB232
Cla97C10G186740Cucurbita moschata (Rifu)cmowmbB315
Cla97C10G186740Cucurbita moschata (Rifu)cmowmbB585
Cla97C10G186740Cucurbita moschata (Rifu)cmowmbB819
Cla97C10G186740Wild cucumber (PI 183967)cpiwmbB184
Cla97C10G186740Wild cucumber (PI 183967)cpiwmbB186
Cla97C10G186740Wild cucumber (PI 183967)cpiwmbB188
Cla97C10G186740Cucumber (Chinese Long) v3cucwmbB182
Cla97C10G186740Cucumber (Chinese Long) v3cucwmbB184
Cla97C10G186740Cucumber (Chinese Long) v3cucwmbB186
Cla97C10G186740Cucumber (Chinese Long) v2cuwmbB181
Cla97C10G186740Cucumber (Chinese Long) v2cuwmbB183
Cla97C10G186740Cucumber (Chinese Long) v2cuwmbB185
Cla97C10G186740Bottle gourd (USVL1VR-Ls)lsiwmbB324
Cla97C10G186740Bottle gourd (USVL1VR-Ls)lsiwmbB395
Cla97C10G186740Melon (DHL92) v3.6.1medwmbB307
Cla97C10G186740Melon (DHL92) v3.6.1medwmbB415
Cla97C10G186740Melon (DHL92) v3.6.1medwmbB419
Cla97C10G186740Melon (DHL92) v3.5.1mewmbB318
Cla97C10G186740Melon (DHL92) v3.5.1mewmbB428
Cla97C10G186740Watermelon (Charleston Gray)wcgwmbB005
Cla97C10G186740Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G186740Watermelon (Charleston Gray)wcgwmbB218
Cla97C10G186740Watermelon (97103) v1wmwmbB009
Cla97C10G186740Watermelon (97103) v1wmwmbB056
Cla97C10G186740Watermelon (97103) v1wmwmbB197
Cla97C10G186740Wax gourdwgowmbB017