Cla97C10G185330 (gene) Watermelon (97103) v2

Overview
NameCla97C10G185330
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionBis(5'-adenosyl)-triphosphatase
LocationCla97Chr10 : 720729 .. 722437 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCAGACCACTACACGTTTGGGCGTTACAAGATTGATCCGAAGGAAGTATTCTACTGCACCAGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTGTTCCTGGTACTCTCTCTACTTTTCTTTAGTTTCTCGTATGGAGTTTGATCTCGTAGTTCTATATGATTAACCGGTCTGAGTAACTGTGCATATATGTTTTTGAATTTATTTAAGGAATAAACCGAGATCTGGAGCAGATTTAAGTAATAATTTGTGCTCTGTTCACACATGTTCTTCAATTACAAACTAGAAATTTGAAGGGTAACAGGAAGTTCAACACAGTTAATCAGAGTTAGATGACTACCATGCAAATCAAAGAATTCAAATAGAAATGTGATCCTATTGTATTGGATATTGCGAGTATTTGGTCAGTTAACATGCATTTGACTAAATTCTTTAGACAATGGTTTGACTCGACAGAATCCGACTTGTAGAACTTTGGCCTGCTACCATAGCCATAGTAATTGTGTTTTTATCTGTATTTTGTGATGGAGTTCTTCACGGGGCGTGGTACAAACTTATTTGTGAAGTCTTTTGCCAAGTCCTCTGTTGGAATATTTGGGGTGATAGGGTTTGTACTTCGCAAAAACAGAGTAGTTTTTCTTTGGATGTACAGGATTGTGGATGGACTGGAATGGAAAGGTTTTCTAAGCTAATTCTGAGGGAGGTTGAGAGTACCACAATAGAATTGAGAATTTAAATGCTACGCCATAAACAAACATCTTATTTTAGCATCAGTTGTCCCTTCACAGAAATTTGTTAATCTTCAAGTTAAATGGACGGAATTTGTCTGATGGGTTTCAGTATCCAGTGCAATCTTAACTGTCGACAGTTGGGGAAATAATACACTTTGTCAATGGCCAATTAGGCAGACACTTGAATATTTTTGCAAGGCACAGCGTTTGAAGGATCATTCCATTCTTTTGTCTCTTCTCTTGCAGATTCCATATAAGCTCTAAATTTATGACTGATTGATCCTCATTCCTATTTCCTTGATATTAAACCCTTTTCCCATCTCATATCTTGCCTTATCTTTCATCCCATTCTTTGTAGGCTTCATATTTGATAATTTTCTTCTGTTGTTCCTATCAGCTATTTTGGTTCCCAATCGTCTTTCAATCATATTTGTCTGCGTGTGTTTCATTCTTTGATTGGACATGCAAACTTTTATTAGAGAATTTTAATCACTAAGAATTGTGATTTTCATTTATCACTGACAAGTTTTGTTCAAAAAAGAAAAAGAAAAAAAGGAAGAAGAAAAAGAAAATCACTAAGAACTGATGATCTCTTATTTTTGGATTCTTATGACTTGTAAAAAGGAAAGTTTCATGAGATTTTATCATGGTACAGTCAGTATTGGGAGACATAGATATCTCCTTTATGCAGAATTTTTTTCCGTGAGGACTATGCATCAAGCTGGCTTGGCTGATAAATTTTGTATAAGTGTCTTATATAAAAGATTTTTTTGTGCAGTATTCTAGATCAAGAGCTTCTTTCTTTGCTGAATTGCACCTTCTTACTCTTGTTTGATTAATTGCTTTTGGCATTGCAGGTCATATCCTTTTTGATGCACGATTTATTGGACAATATTAGGAGGCCCTTGTATGATGATTATAGAAGAGAGCCACTCATCTATCAAACATTTCATCATGAGCCTGGATTTTGA

mRNA sequence

ATGGGATCAGACCACTACACGTTTGGGCGTTACAAGATTGATCCGAAGGAAGTATTCTACTGCACCAGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTGTTCCTGGATTGTGGATGGACTGGAATGGAAAGGTCATATCCTTTTTGATGCACGATTTATTGGACAATATTAGGAGGCCCTTGTATGATGATTATAGAAGAGAGCCACTCATCTATCAAACATTTCATCATGAGCCTGGATTTTGA

Coding sequence (CDS)

ATGGGATCAGACCACTACACGTTTGGGCGTTACAAGATTGATCCGAAGGAAGTATTCTACTGCACCAGTCTCTCTTACGCCATGGTCAACCTCCGTCCTCTTGTTCCTGGATTGTGGATGGACTGGAATGGAAAGGTCATATCCTTTTTGATGCACGATTTATTGGACAATATTAGGAGGCCCTTGTATGATGATTATAGAAGAGAGCCACTCATCTATCAAACATTTCATCATGAGCCTGGATTTTGA

Protein sequence

MGSDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPGLWMDWNGKVISFLMHDLLDNIRRPLYDDYRREPLIYQTFHHEPGF
Homology
[Close]
BLAST of Cla97C10G185330 vs. NCBI nr
Match: ADN33939.1 (bis(5'-adenosyl)-triphosphatase [Cucumis melo subsp. melo])

HSP 1 Score: 109.4 bits (272), Expect = 5.9e-21
Identity = 53/79 (67.09%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 3   SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPGLWMDWNGKVISFLMHDLLDNIRRPL 62
           SDHYTFGRYKIDPKEVFYCT+LSYAM                 VISF MH+LL+NIRR L
Sbjct: 48  SDHYTFGRYKIDPKEVFYCTTLSYAM-----------------VISFSMHNLLENIRRCL 107

Query: 63  YDDYRREPLIYQTFHHEPG 82
           YDDYRR PL YQTF+H+PG
Sbjct: 108 YDDYRRVPLFYQTFYHDPG 109

[Close]
BLAST of Cla97C10G185330 vs. NCBI nr
Match: XP_022923564.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita moschata])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MGSDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          M S++YTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG
Sbjct: 38 MASENYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 74

[Close]
BLAST of Cla97C10G185330 vs. NCBI nr
Match: XP_022965378.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita maxima])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MGSDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          M S++YTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG
Sbjct: 34 MASENYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 70

[Close]
BLAST of Cla97C10G185330 vs. NCBI nr
Match: XP_023551805.1 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita pepo subsp. pepo])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 1  MGSDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          M S++YTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG
Sbjct: 36 MASENYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 72

[Close]
BLAST of Cla97C10G185330 vs. NCBI nr
Match: XP_016900576.1 (PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 3  SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          SDHYTFGRYKIDPKEVFYCT+LSYAMVNLRPL+PG
Sbjct: 48 SDHYTFGRYKIDPKEVFYCTTLSYAMVNLRPLLPG 82

[Close]
BLAST of Cla97C10G185330 vs. TrEMBL
Match: tr|E5RDD1|E5RDD1_CUCME (Bis(5'-adenosyl)-triphosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-21
Identity = 53/79 (67.09%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 3   SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPGLWMDWNGKVISFLMHDLLDNIRRPL 62
           SDHYTFGRYKIDPKEVFYCT+LSYAM                 VISF MH+LL+NIRR L
Sbjct: 48  SDHYTFGRYKIDPKEVFYCTTLSYAM-----------------VISFSMHNLLENIRRCL 107

Query: 63  YDDYRREPLIYQTFHHEPG 82
           YDDYRR PL YQTF+H+PG
Sbjct: 108 YDDYRRVPLFYQTFYHDPG 109

[Close]
BLAST of Cla97C10G185330 vs. TrEMBL
Match: tr|A0A1S4DX69|A0A1S4DX69_CUCME (bis(5'-adenosyl)-triphosphatase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490697 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 0 

Query: 3  SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          SDHYTFGRYKIDPKEVFYCT+LSYAMVNLRPL+PG
Sbjct: 48 SDHYTFGRYKIDPKEVFYCTTLSYAMVNLRPLLPG 82

[Close]
BLAST of Cla97C10G185330 vs. TrEMBL
Match: tr|A0A1S3BJZ3|A0A1S3BJZ3_CUCME (bis(5'-adenosyl)-triphosphatase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490697 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.2e-11
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 3  SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVP 37
          SDHYTFGRYKIDPKEVFYCT+LSYAMVNLRPL+P
Sbjct: 48 SDHYTFGRYKIDPKEVFYCTTLSYAMVNLRPLLP 81

[Close]
BLAST of Cla97C10G185330 vs. TrEMBL
Match: tr|A0A0A0L1M8|A0A0A0L1M8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002820 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-09
Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 0 

Query: 3  SDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVP 37
          SDHYTFGRYKIDPKEVFY T+LSYAMVNLRPL+P
Sbjct: 50 SDHYTFGRYKIDPKEVFYSTTLSYAMVNLRPLLP 83

[Close]
BLAST of Cla97C10G185330 vs. TrEMBL
Match: tr|A0A2I0A8E6|A0A2I0A8E6_9ASPA (Bis(5'-adenosyl)-triphosphatase OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash008059 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-08
Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 1  MGSDHYTFGRYKIDPKEVFYCTSLSYAMVNLRPLVPG 38
          M ++HYTFG YKI P EVFY T LSYAMVNLRPL+PG
Sbjct: 1  MAAEHYTFGPYKIHPSEVFYATDLSYAMVNLRPLLPG 37

[Close]
BLAST of Cla97C10G185330 vs. Swiss-Prot
Match: sp|F4KEV7|FHIT_ARATH (Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT OS=Arabidopsis thaliana OX=3702 GN=FHIT PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-08
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 6  YTFGRYKIDPKEVFYCTSLSYAMVNLRPLVP 37
          Y FG YKIDP+EVFY T LSYAMVNLRPL+P
Sbjct: 28 YAFGPYKIDPREVFYATPLSYAMVNLRPLLP 58

[Close]
BLAST of Cla97C10G185330 vs. TAIR10
Match: AT5G58240.1 (FRAGILE HISTIDINE TRIAD)

HSP 1 Score: 58.2 bits (139), Expect = 2.8e-09
Identity = 25/31 (80.65%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 6  YTFGRYKIDPKEVFYCTSLSYAMVNLRPLVP 37
          Y FG YKIDP+EVFY T LSYAMVNLRPL+P
Sbjct: 28 YAFGPYKIDPREVFYATPLSYAMVNLRPLLP 58

The following BLAST results are available for this feature:
BLAST of Cla97C10G185330 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33939.15.9e-2167.09bis(5'-adenosyl)-triphosphatase [Cucumis melo subsp. melo][more]
XP_022923564.11.5e-1191.89bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita m... [more]
XP_022965378.11.5e-1191.89bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita m... [more]
XP_023551805.11.5e-1191.89bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT [Cucurbita p... [more]
XP_016900576.11.9e-1194.29PREDICTED: bis(5'-adenosyl)-triphosphatase isoform X1 [Cucumis melo][more]
BLAST of Cla97C10G185330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5RDD1|E5RDD1_CUCME3.9e-2167.09Bis(5'-adenosyl)-triphosphatase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S4DX69|A0A1S4DX69_CUCME1.3e-1194.29bis(5'-adenosyl)-triphosphatase isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034906... [more]
tr|A0A1S3BJZ3|A0A1S3BJZ3_CUCME8.2e-1194.12bis(5'-adenosyl)-triphosphatase isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034906... [more]
tr|A0A0A0L1M8|A0A0A0L1M8_CUCSA1.2e-0991.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002820 PE=4 SV=1[more]
tr|A0A2I0A8E6|A0A2I0A8E6_9ASPA3.8e-0875.68Bis(5'-adenosyl)-triphosphatase OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash... [more]
BLAST of Cla97C10G185330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4KEV7|FHIT_ARATH5.1e-0880.65Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT OS=Arabidops... [more]
BLAST of Cla97C10G185330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58240.12.8e-0980.65FRAGILE HISTIDINE TRIAD[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0006310 DNA recombination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003824 catalytic activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G185330.1Cla97C10G185330.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036265HIT-like superfamilyGENE3DG3DSA:3.30.428.10coord: 4..78
e-value: 8.6E-7
score: 30.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C10G185330Cla008894Watermelon (97103) v1wmwmbB056
Cla97C10G185330Csa3G002820Cucumber (Chinese Long) v2cuwmbB181
Cla97C10G185330ClCG10G000760Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G185330CSPI03G00770Wild cucumber (PI 183967)cpiwmbB184
Cla97C10G185330Cucsa.322600Cucumber (Gy14) v1cgywmbB562
Cla97C10G185330CmaCh16G012350Cucurbita maxima (Rimu)cmawmbB337
Cla97C10G185330CsGy3G000740Cucumber (Gy14) v2cgybwmbB174
Cla97C10G185330MELO3C013768.2Melon (DHL92) v3.6.1medwmbB415
Cla97C10G185330Carg19478Silver-seed gourdcarwmbB0453
Cla97C10G185330CsaV3_3G000810Cucumber (Chinese Long) v3cucwmbB182
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G185330Melon (DHL92) v3.5.1mewmbB430
Cla97C10G185330Silver-seed gourdcarwmbB0705
Cla97C10G185330Cucurbita maxima (Rimu)cmawmbB446
Cla97C10G185330Cucurbita maxima (Rimu)cmawmbB839
Cla97C10G185330Cucurbita moschata (Rifu)cmowmbB320
Cla97C10G185330Cucurbita moschata (Rifu)cmowmbB427
Cla97C10G185330Cucurbita moschata (Rifu)cmowmbB813
Cla97C10G185330Bottle gourd (USVL1VR-Ls)lsiwmbB395
Cla97C10G185330Wax gourdwgowmbB548