Cla97C09G174130 (gene) Watermelon (97103) v2

Overview
NameCla97C09G174130
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr09 : 10731186 .. 10732272 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTGATCCATGATGAACAACAGGCGTACTTGAGCCATACGTTGGACCTTCCAATTGTGGATGGGTATGTAGAGCCTCCCCCTCGCCTACTAGAGAGCATTGTTCGTGATACCATCTTGAGTGATGAGAGTGAGGAACGGGGGATTGGTGAAGATACGCATGCGGGTGGTCCTTTTACAGATTCTGATCCACTTGTGAGTGAGCCGCTTGTGACACGCCCAACTGAGATTGCCCCACCTACGAGGACGACATCTACTAGTTCTTGGACGACGTGTGATAGCAGGCAACACTTACAACGATTGGAGAGTAAATTGGATCGAATGGAGTCCTTATTTACGACTGAGTTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGGTAAGTTAGTTGTGAATTTCTATACTTTAAATTTAAAATCTTATGCTTTAAATCGAATAATTTTATATCATTTGTAGGGAAAGTCGGTCGACTCGCAGCAGTATTACGACGCTAGAGAAGGTTCGTTGTTCATGAACTAGTTGCCGGAGATCAATCTGTTGACGATTGCAAAGATACGGCTAGTCCACCTGCTCAGGATCCCACTCCCATTGACTCAAACTCAAACGATGGCAAAGATACGGCTGATCCATCCATCGTCCCTATAGATGTATCATTGCGAGGTGAAGATACGATTGGTCCAACAGATGTTCCACTGAAGTAGCCTAAAAGACGAGGTATGATCTTCTGCATCTAGTACTTGATACATTTTTCATGTAACTTTGATATGGTTTCTTTGTATGTAGCCTTGGAAGATTGACAATGACGTCATTCCGTTGTCTCAACCTCCGAATGTGGTTCATAAGGAAATGCCCACGAGGAAGAGGAGAGCCCCATGGAAGCTTCGTAGTTCAATAATGGATCAACCGGCTGGGAAGAAGAGGAATAAAAAAGTGAAACCATATAATCCGATGGCTAAGATACCAGCCAAGTTTGAGAAGCAGTTCTATGCATATATTGTTGACCCTAGACTGATTGTTATGAGCATAAGGAGGCTGTTGTGGTTTATGAACTTGTTGACATCGGATACATTCATCGATGA

mRNA sequence

ATGTCATTGATCCATGATGAACAACAGGCGTACTTGAGCCATACGTTGGACCTTCCAATTGTGGATGGGTATGTAGAGCCTCCCCCTCGCCTACTAGAGAGCATTGTTCGTGATACCATCTTGAGTGATGAGAGTGAGGAACGGGGGATTGGTGAAGATACGCATGCGGGTGGTCCTTTTACAGATTCTGATCCACTTGTGAGTGAGCCGCTTGTGACACGCCCAACTGAGATTGCCCCACCTACGAGGACGACATCTACTAGTTCTTGGACGACGTGTGATAGCAGGCAACACTTACAACGATTGGAGAGTAAATTGGATCGAATGGAGTCCTTATTTACGACTGAGTTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGGGAAAGTCGGTCGACTCGCAGCAGTATTACGACGCTAGAGAAGTTGCCGGAGATCAATCTGTTGACGATTGCAAAGATACGGCTAGTCCACCTGCTCAGGATCCCACTCCCATTGACTCAAACTCAAACGATGGCAAAGATACGGCTGATCCATCCATCGTCCCTATAGATGTATCATTGCGAGGTGAAGATACGATTGGTCCAACAGATCCTTGGAAGATTGACAATGACGTCATTCCGTTGTCTCAACCTCCGAATGTGGTTCATAAGGAAATGCCCACGAGGAAGAGGAGAGCCCCATGGAAGCTTCGTAGTTCAATAATGGATCAACCGGCTGGGAAGAAGAGGAATAAAAAAACTGATTGTTATGAGCATAAGGAGGCTGTTGTGGTTTATGAACTTGTTGACATCGGATACATTCATCGATGA

Coding sequence (CDS)

ATGTCATTGATCCATGATGAACAACAGGCGTACTTGAGCCATACGTTGGACCTTCCAATTGTGGATGGGTATGTAGAGCCTCCCCCTCGCCTACTAGAGAGCATTGTTCGTGATACCATCTTGAGTGATGAGAGTGAGGAACGGGGGATTGGTGAAGATACGCATGCGGGTGGTCCTTTTACAGATTCTGATCCACTTGTGAGTGAGCCGCTTGTGACACGCCCAACTGAGATTGCCCCACCTACGAGGACGACATCTACTAGTTCTTGGACGACGTGTGATAGCAGGCAACACTTACAACGATTGGAGAGTAAATTGGATCGAATGGAGTCCTTATTTACGACTGAGTTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGGGAAAGTCGGTCGACTCGCAGCAGTATTACGACGCTAGAGAAGTTGCCGGAGATCAATCTGTTGACGATTGCAAAGATACGGCTAGTCCACCTGCTCAGGATCCCACTCCCATTGACTCAAACTCAAACGATGGCAAAGATACGGCTGATCCATCCATCGTCCCTATAGATGTATCATTGCGAGGTGAAGATACGATTGGTCCAACAGATCCTTGGAAGATTGACAATGACGTCATTCCGTTGTCTCAACCTCCGAATGTGGTTCATAAGGAAATGCCCACGAGGAAGAGGAGAGCCCCATGGAAGCTTCGTAGTTCAATAATGGATCAACCGGCTGGGAAGAAGAGGAATAAAAAAACTGATTGTTATGAGCATAAGGAGGCTGTTGTGGTTTATGAACTTGTTGACATCGGATACATTCATCGATGA

Protein sequence

MSLIHDEQQAYLSHTLDLPIVDGYVEPPPRLLESIVRDTILSDESEERGIGEDTHAGGPFTDSDPLVSEPLVTRPTEIAPPTRTTSTSSWTTCDSRQHLQRLESKLDRMESLFTTELKAIKDMLMLIMKGKSVDSQQYYDAREVAGDQSVDDCKDTASPPAQDPTPIDSNSNDGKDTADPSIVPIDVSLRGEDTIGPTDPWKIDNDVIPLSQPPNVVHKEMPTRKRRAPWKLRSSIMDQPAGKKRNKKTDCYEHKEAVVVYELVDIGYIHR
Homology
[Close]
BLAST of Cla97C09G174130 vs. NCBI nr
Match: XP_008450207.1 (PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo])

HSP 1 Score: 54.3 bits (129), Expect = 7.5e-04
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 92  TCDSRQHLQRLESKLDR-------MESLFTTELKAIKDMLMLIMKGKSVDSQQYYDARE 144
           TC+  +HL+ LE KLDR       M+S  T EL  IK++LML++KGK+VDSQQ Y   E
Sbjct: 2   TCNCSKHLRLLEGKLDRMNEFLDQMQSSITAELSTIKELLMLLVKGKAVDSQQCYGGGE 60

[Close]
BLAST of Cla97C09G174130 vs. TrEMBL
Match: tr|A0A1S3BN49|A0A1S3BN49_CUCME (uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 92  TCDSRQHLQRLESKLDR-------MESLFTTELKAIKDMLMLIMKGKSVDSQQYYDARE 144
           TC+  +HL+ LE KLDR       M+S  T EL  IK++LML++KGK+VDSQQ Y   E
Sbjct: 2   TCNCSKHLRLLEGKLDRMNEFLDQMQSSITAELSTIKELLMLLVKGKAVDSQQCYGGGE 60

The following BLAST results are available for this feature:
BLAST of Cla97C09G174130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450207.17.5e-0450.85PREDICTED: uncharacterized protein LOC103491868 [Cucumis melo][more]
BLAST of Cla97C09G174130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BN49|A0A1S3BN49_CUCME5.0e-0450.85uncharacterized protein LOC103491868 OS=Cucumis melo OX=3656 GN=LOC103491868 PE=... [more]
BLAST of Cla97C09G174130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C09G174130 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G174130.1Cla97C09G174130.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..248

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G174130Cla016265Watermelon (97103) v1wmwmbB041
Cla97C09G174130ClCG09G011410Watermelon (Charleston Gray)wcgwmbB035
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C09G174130Wax gourdwgowmbB277
Cla97C09G174130Silver-seed gourdcarwmbB0558
Cla97C09G174130Silver-seed gourdcarwmbB0823
Cla97C09G174130Cucumber (Gy14) v2cgybwmbB484
Cla97C09G174130Cucumber (Gy14) v1cgywmbB339
Cla97C09G174130Cucurbita maxima (Rimu)cmawmbB554
Cla97C09G174130Cucurbita maxima (Rimu)cmawmbB662
Cla97C09G174130Cucurbita moschata (Rifu)cmowmbB536
Cla97C09G174130Cucurbita moschata (Rifu)cmowmbB636
Cla97C09G174130Wild cucumber (PI 183967)cpiwmbB534
Cla97C09G174130Cucumber (Chinese Long) v3cucwmbB527
Cla97C09G174130Cucumber (Chinese Long) v2cuwmbB508
Cla97C09G174130Bottle gourd (USVL1VR-Ls)lsiwmbB105
Cla97C09G174130Melon (DHL92) v3.6.1medwmbB124