Cla97C09G168890 (gene) Watermelon (97103) v2

NameCla97C09G168890
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
LocationCla97Chr09 : 5244443 .. 5244847 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACTAAATCCCTACTTTTAATACCTCTCCTCATTCTTCTGTTGTTCTCCAAATTCTTAAGCACTTCCACCACCGATCACGGCGGCGAGGCTCCAAATTCTCTAACCGAAACGTTTCACCGGAACATTTTCCACACTGCGGCTCATCCGATTGCAAAGAACAATGGCGAATCCTCCCTGAAAGAGAATATGAATAATGCTCTTGTCAAAAAGCGGACCCGACCTTTACCCTTACCTTTACCTATTGGTCGAAGCCGAGGTCACAATCGTAATTGTACCTCAACAACGAAGAATCAAACCCGAAGCCATAACCGTAACTGTACGTCCATAGCAAATCAAAATCGAGGGACGCCATTTGGCATTGGATCCATCATCCTCCTCTTGGGATTAGTTCTGTGA

mRNA sequence

ATGGCTTCCACTAAATCCCTACTTTTAATACCTCTCCTCATTCTTCTGTTGTTCTCCAAATTCTTAAGCACTTCCACCACCGATCACGGCGGCGAGGCTCCAAATTCTCTAACCGAAACGTTTCACCGGAACATTTTCCACACTGCGGCTCATCCGATTGCAAAGAACAATGGCGAATCCTCCCTGAAAGAGAATATGAATAATGCTCTTGTCAAAAAGCGGACCCGACCTTTACCCTTACCTTTACCTATTGGTCGAAGCCGAGGTCACAATCGTAATTGTACCTCAACAACGAAGAATCAAACCCGAAGCCATAACCGTAACTGTACGTCCATAGCAAATCAAAATCGAGGGACGCCATTTGGCATTGGATCCATCATCCTCCTCTTGGGATTAGTTCTGTGA

Coding sequence (CDS)

ATGGCTTCCACTAAATCCCTACTTTTAATACCTCTCCTCATTCTTCTGTTGTTCTCCAAATTCTTAAGCACTTCCACCACCGATCACGGCGGCGAGGCTCCAAATTCTCTAACCGAAACGTTTCACCGGAACATTTTCCACACTGCGGCTCATCCGATTGCAAAGAACAATGGCGAATCCTCCCTGAAAGAGAATATGAATAATGCTCTTGTCAAAAAGCGGACCCGACCTTTACCCTTACCTTTACCTATTGGTCGAAGCCGAGGTCACAATCGTAATTGTACCTCAACAACGAAGAATCAAACCCGAAGCCATAACCGTAACTGTACGTCCATAGCAAATCAAAATCGAGGGACGCCATTTGGCATTGGATCCATCATCCTCCTCTTGGGATTAGTTCTGTGA

Protein sequence

MASTKSLLLIPLLILLLFSKFLSTSTTDHGGEAPNSLTETFHRNIFHTAAHPIAKNNGESSLKENMNNALVKKRTRPLPLPLPIGRSRGHNRNCTSTTKNQTRSHNRNCTSIANQNRGTPFGIGSIILLLGLVL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016567 protein ubiquitination
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C09G168890.1Cla97C09G168890.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..104

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C09G168890ClCG09G006340Watermelon (Charleston Gray)wcgwmbB035
Cla97C09G168890BhiUN245G35Wax gourdwgowmbB161
The following gene(s) are paralogous to this gene:

None