Cla97C09G167550 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C09G167550
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	calvin cycle protein CP12-1, chloroplastic-like
Location	Cla97Chr09 : 4279835 .. 4280212 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCGATCTCCGGTGCTACTATGGCAGCCTCAAAGGCGGTGGCTGACTCGCCGAAAATCGAATCGCCGGTCCTCCGATCCGCCCGGCTCAGCTACCCATGGAAGCAGTGGACCGCCGGTCGGATGAGCGCAGTTGGACCGGTGGCGGCGGCACCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCAGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCCAGCCACGCACGTGACCGCCTCAAGGATTCGGACCCCCTTGAGGATTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGATTGA

mRNA sequence

ATGGCAGCGATCTCCGGTGCTACTATGGCAGCCTCAAAGGCGGTGGCTGACTCGCCGAAAATCGAATCGCCGGTCCTCCGATCCGCCCGGCTCAGCTACCCATGGAAGCAGTGGACCGCCGGTCGGATGAGCGCAGTTGGACCGGTGGCGGCGGCACCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCAGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCCAGCCACGCACGTGACCGCCTCAAGGATTCGGACCCCCTTGAGGATTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGATTGA

Coding sequence (CDS)

ATGGCAGCGATCTCCGGTGCTACTATGGCAGCCTCAAAGGCGGTGGCTGACTCGCCGAAAATCGAATCGCCGGTCCTCCGATCCGCCCGGCTCAGCTACCCATGGAAGCAGTGGACCGCCGGTCGGATGAGCGCAGTTGGACCGGTGGCGGCGGCACCGGACCGGATATCGGAGAAGGTGGTGGAGAGCATAAAGAACGCAGAGGAGACGTGCTCGGAGGATCCGGCGAGCGGCGAGTGCGCGGCGGCGTGGGATGAGGTGGAGGAGCTCAGCGCCGCCGCCAGCCACGCACGTGACCGCCTCAAGGATTCGGACCCCCTTGAGGATTTTTGTAAGGATAATCCCGAGACGGAGGAGTGTCGCACGTATGAGGATTGA

Protein sequence

MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEECRTYED

Homology

[Close]

BLAST of Cla97C09G167550 vs. NCBI nr
Match: XP_022991513.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56
Identity = 116/125 (92.80%), Postives = 122/125 (97.60%), Query Frame = 0


Query: 1   MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKV 60
           MAAISGATMA SKAVADSPK+ESPVLRSARL+YPWK+W+A R+ AVGPV+AAPDRISEKV
Sbjct: 1   MAAISGATMAVSKAVADSPKLESPVLRSARLNYPWKRWSAVRLCAVGPVSAAPDRISEKV 60

Query: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120
           VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Cla97C09G167550 vs. NCBI nr
Match: XP_023548709.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 2.5e-55
Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKV 60
           MAAISGATM  SKAVADSP +ESPVLRSARL+YPWK+W+A R+ AVGPV+AAPDRISEKV
Sbjct: 1   MAAISGATMGVSKAVADSPNLESPVLRSARLNYPWKRWSAVRLRAVGPVSAAPDRISEKV 60

Query: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120
           VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Cla97C09G167550 vs. NCBI nr
Match: XP_022953775.1 (calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 223.4 bits (568), Expect = 4.3e-55
Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 0


Query: 1   MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKV 60
           MAAISGATMA SKAVADSPK+ES VLRSARL YPWK+W+A R+ AVGPV+AAPDRISEKV
Sbjct: 1   MAAISGATMAVSKAVADSPKLESTVLRSARLYYPWKRWSAVRLRAVGPVSAAPDRISEKV 60

Query: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120
           VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC
Sbjct: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120

Query: 121 RTYED 126
           RTYED
Sbjct: 121 RTYED 125

[Close]

BLAST of Cla97C09G167550 vs. NCBI nr
Match: KGN45014.1 (hypothetical protein Csa_7G407670 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 4.8e-54
Identity = 113/125 (90.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKV 60
           MAAI+G++MAASKAV DSPKIE PVLRS+RLSYPWK+WT+GRMSAVG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120
           VESIKNAE TCSEDPASGECAAAWDEVEELSAAASHARDRL  SDPLEDFCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

Query: 121 RTYED 126
           RTYED
Sbjct: 177 RTYED 181

[Close]

BLAST of Cla97C09G167550 vs. NCBI nr
Match: XP_008451482.2 (PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 5.3e-53
Identity = 109/117 (93.16%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 9   MAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKVVESIKNAE 68
           MAA+KAV DSPKIESPV RS+RLSYPWK+WT+GRMSAVGPVAAAPDRISEKVVESIKNAE
Sbjct: 1   MAATKAVTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKVVESIKNAE 60

Query: 69  ETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEECRTYED 126
            TCSEDPASGECAAAWDEVEELSAAASHARDRLKD+DPLEDFCKDNPETEECRTYED
Sbjct: 61  VTCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEECRTYED 117

[Close]

BLAST of Cla97C09G167550 vs. TrEMBL
Match: tr|A0A0A0K832|A0A0A0K832_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407670 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.1e-54
Identity = 113/125 (90.40%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MAAISGATMAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKV 60
           MAAI+G++MAASKAV DSPKIE PVLRS+RLSYPWK+WT+GRMSAVG VAAAPDRISEKV
Sbjct: 57  MAAITGSSMAASKAVTDSPKIELPVLRSSRLSYPWKRWTSGRMSAVGTVAAAPDRISEKV 116

Query: 61  VESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEEC 120
           VESIKNAE TCSEDPASGECAAAWDEVEELSAAASHARDRL  SDPLEDFCKDNPETEEC
Sbjct: 117 VESIKNAEVTCSEDPASGECAAAWDEVEELSAAASHARDRLSHSDPLEDFCKDNPETEEC 176

Query: 121 RTYED 126
           RTYED
Sbjct: 177 RTYED 181

[Close]

BLAST of Cla97C09G167550 vs. TrEMBL
Match: tr|A0A1S3BSD2|A0A1S3BSD2_CUCME (calvin cycle protein CP12-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492757 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.5e-53
Identity = 109/117 (93.16%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 9   MAASKAVADSPKIESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKVVESIKNAE 68
           MAA+KAV DSPKIESPV RS+RLSYPWK+WT+GRMSAVGPVAAAPDRISEKVVESIKNAE
Sbjct: 1   MAATKAVTDSPKIESPVHRSSRLSYPWKRWTSGRMSAVGPVAAAPDRISEKVVESIKNAE 60

Query: 69  ETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEECRTYED 126
            TCSEDPASGECAAAWDEVEELSAAASHARDRLKD+DPLEDFCKDNPETEECRTYED
Sbjct: 61  VTCSEDPASGECAAAWDEVEELSAAASHARDRLKDADPLEDFCKDNPETEECRTYED 117

[Close]

BLAST of Cla97C09G167550 vs. TrEMBL
Match: tr|F6HPR1|F6HPR1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g02480 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 89/131 (67.94%), Postives = 103/131 (78.63%), Query Frame = 0


Query: 1   MAAISGATMAASKAV---ADSPKIESPVLRSARLSYPWK---QWTAGRMSAVGPVAAAPD 60
           MA I+G +++  + +   ADSPK  S  ++S  LS PWK   ++ AGRM  V PVAAAPD
Sbjct: 70  MATIAGVSLSTPRVLARAADSPK--SQTIQSPWLSNPWKRPSRFGAGRM-CVRPVAAAPD 129

Query: 61  RISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDN 120
            ISEKVVESIKNAEE CS+DPASGEC AAWDEVEELSAAASHARD+ K+SDPLE +CKDN
Sbjct: 130 SISEKVVESIKNAEEKCSDDPASGECVAAWDEVEELSAAASHARDKKKESDPLETYCKDN 189

Query: 121 PETEECRTYED 126
           PE EECRTYED
Sbjct: 190 PEDEECRTYED 197

[Close]

BLAST of Cla97C09G167550 vs. TrEMBL
Match: tr|B7XB92|B7XB92_FAGCR (Chloroplast protein 12 OS=Fagus crenata OX=28929 GN=CP12 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-32
Identity = 82/132 (62.12%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 1   MAAISGATMAASKAV---ADSPKIESPVLRSARLSYPWKQWT----AGRMSAVGPVAAAP 60
           MA I+G  ++  + +   ADSPK ++  ++S  LS+ WK+ T    AGR   V PV+AAP
Sbjct: 1   MATIAGLNLSTPRVLAKSADSPKAQT--IKSPWLSHSWKRPTLFGYAGRSMQVRPVSAAP 60

Query: 61  DRISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKD 120
           ++IS+KV ESIK+AEE C+ DPASGEC AAWDEVEELSAAASHARD+ K SDPLE++CKD
Sbjct: 61  EKISDKVAESIKDAEEACAGDPASGECVAAWDEVEELSAAASHARDKKKGSDPLEEYCKD 120

Query: 121 NPETEECRTYED 126
           NPETEECRTYED
Sbjct: 121 NPETEECRTYED 130

[Close]

BLAST of Cla97C09G167550 vs. TrEMBL
Match: tr|A0A2N9IQL5|A0A2N9IQL5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54486 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-32
Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 16  ADSPKIESPVLRSARLSYPWKQWT----AGRMSAVGPVAAAPDRISEKVVESIKNAEETC 75
           ADSPK ++  ++S  LS+ WK+ T    AGR   V PV+AAP++IS+KV ESIK+AEE C
Sbjct: 21  ADSPKAQT--IKSPWLSHSWKRPTQFGYAGRSMQVRPVSAAPEKISDKVAESIKDAEEAC 80

Query: 76  SEDPASGECAAAWDEVEELSAAASHARDRLKDSDPLEDFCKDNPETEECRTYED 126
           + DPASGEC AAWDEVEELSAAASHARD+ K SDPLE+FCKDNPET+ECRTYED
Sbjct: 81  AGDPASGECVAAWDEVEELSAAASHARDKKKGSDPLEEFCKDNPETDECRTYED 132

[Close]

BLAST of Cla97C09G167550 vs. Swiss-Prot
Match: sp|O22914|CP121_ARATH (Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-26
Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 8   TMAASKAVADSPKI----ESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKVVES 67
           T+AA+     +P++     + VL   RL+YPWK  +  RM  V   A +   ISEKV +S
Sbjct: 3   TIAAAGLNVATPRVVVRPVARVLGPVRLNYPWKFGSMKRMVVV--KATSEGEISEKVEKS 62

Query: 68  IKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLK--DSDPLEDFCKDNPETEECR 126
           I+ A+ETC++DP SGEC AAWDEVEELSAAASHARD+ K   SDPLE++C DNPET+ECR
Sbjct: 63  IQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECR 122

[Close]

BLAST of Cla97C09G167550 vs. Swiss-Prot
Match: sp|Q9LZP9|CP122_ARATH (Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 7.8e-24
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 39  TAGRMSAVGPVAAAPD-RISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHA 98
           T  RM  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 99  RDRLK--DSDPLEDFCKDNPETEECRTYED 126
           RD+ K   SDPLE++CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of Cla97C09G167550 vs. Swiss-Prot
Match: sp|Q9C9K2|CP123_ARATH (Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP12-3 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-13
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 54  DRISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLK--DSDPLEDFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

[Close]

BLAST of Cla97C09G167550 vs. Swiss-Prot
Match: sp|A6Q0K5|CP12_CHLRE (Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CP12 PE=1 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-12
Identity = 38/74 (51.35%), Postives = 53/74 (71.62%), Query Frame = 0


Query: 56  ISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLKD----SDPLEDFC 115
           +++KV +++K AE+ C++   S +CA AWD VEELSAA SH +D +K     +DPLE FC
Sbjct: 35  LNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFC 94

Query: 116 KDNPETEECRTYED 126
           KD P+ +ECR YED
Sbjct: 95  KDAPDADECRVYED 107

[Close]

BLAST of Cla97C09G167550 vs. TAIR10
Match: AT2G47400.1 (CP12 domain-containing protein 1)

HSP 1 Score: 117.9 bits (294), Expect = 4.6e-27
Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 8   TMAASKAVADSPKI----ESPVLRSARLSYPWKQWTAGRMSAVGPVAAAPDRISEKVVES 67
           T+AA+     +P++     + VL   RL+YPWK  +  RM  V   A +   ISEKV +S
Sbjct: 3   TIAAAGLNVATPRVVVRPVARVLGPVRLNYPWKFGSMKRMVVV--KATSEGEISEKVEKS 62

Query: 68  IKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLK--DSDPLEDFCKDNPETEECR 126
           I+ A+ETC++DP SGEC AAWDEVEELSAAASHARD+ K   SDPLE++C DNPET+ECR
Sbjct: 63  IQEAKETCADDPVSGECVAAWDEVEELSAAASHARDKKKAGGSDPLEEYCNDNPETDECR 122

[Close]

BLAST of Cla97C09G167550 vs. TAIR10
Match: AT3G62410.1 (CP12 domain-containing protein 2)

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-25
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 0


Query: 39  TAGRMSAVGPVAAAPD-RISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHA 98
           T  RM  + P+ AAP+  IS+ V +SIK A+ETC+ DP SGEC AAWDEVEELSAAASHA
Sbjct: 42  TTNRMMKLQPIKAAPEGGISDVVEKSIKEAQETCAGDPVSGECVAAWDEVEELSAAASHA 101

Query: 99  RDRLK--DSDPLEDFCKDNPETEECRTYED 126
           RD+ K   SDPLE++CKDNPET ECRTY++
Sbjct: 102 RDKKKADGSDPLEEYCKDNPETNECRTYDN 131

[Close]

BLAST of Cla97C09G167550 vs. TAIR10
Match: AT1G76560.1 (CP12 domain-containing protein 3)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 54  DRISEKVVESIKNAEETCSEDPASGECAAAWDEVEELSAAASHARDRLK--DSDPLEDFC 113
           +++SE + E +K A E C  +  S EC  AWDEVEE+S A +  R +LK  + DPLE FC
Sbjct: 61  EKLSEMIEEKVKEATEVCEAEEMSEECRVAWDEVEEVSQARADLRIKLKLLNQDPLESFC 120

Query: 114 KDNPETEECRTYED 126
           ++NPET+ECR YED
Sbjct: 121 QENPETDECRIYED 134

The following BLAST results are available for this feature:

BLAST of Cla97C09G167550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991513.1	2.3e-56	92.80	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita maxima]	[more]
XP_023548709.1	2.5e-55	91.20	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953775.1	4.3e-55	92.00	calvin cycle protein CP12-1, chloroplastic-like [Cucurbita moschata]	[more]
KGN45014.1	4.8e-54	90.40	hypothetical protein Csa_7G407670 [Cucumis sativus]	[more]
XP_008451482.2	5.3e-53	93.16	PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Cucumis melo]	[more]

BLAST of Cla97C09G167550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K832\|A0A0A0K832_CUCSA	3.1e-54	90.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407670 PE=4 SV=1	[more]
tr\|A0A1S3BSD2\|A0A1S3BSD2_CUCME	3.5e-53	93.16	calvin cycle protein CP12-1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|F6HPR1\|F6HPR1_VITVI	1.6e-34	67.94	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0026g02480 PE=4 SV=...	[more]
tr\|B7XB92\|B7XB92_FAGCR	1.5e-32	62.12	Chloroplast protein 12 OS=Fagus crenata OX=28929 GN=CP12 PE=2 SV=1	[more]
tr\|A0A2N9IQL5\|A0A2N9IQL5_FAGSY	2.6e-32	68.42	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54486 PE=4 SV=1	[more]

BLAST of Cla97C09G167550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22914\|CP121_ARATH	8.3e-26	54.84	Calvin cycle protein CP12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
sp\|Q9LZP9\|CP122_ARATH	7.8e-24	65.56	Calvin cycle protein CP12-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
sp\|Q9C9K2\|CP123_ARATH	2.1e-13	51.35	Calvin cycle protein CP12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP...	[more]
sp\|A6Q0K5\|CP12_CHLRE	1.4e-12	51.35	Calvin cycle protein CP12, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN...	[more]

BLAST of Cla97C09G167550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47400.1	4.6e-27	54.84	CP12 domain-containing protein 1	[more]
AT3G62410.1	4.3e-25	65.56	CP12 domain-containing protein 2	[more]
AT1G76560.1	1.2e-14	51.35	CP12 domain-containing protein 3	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR039314	CP12-like
IPR003823	DUF_CP12

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0080153	negative regulation of reductive pentose-phosphate cycle
biological_process	GO:0031334	positive regulation of protein complex assembly
biological_process	GO:0019253	reductive pentose-phosphate cycle
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0043234	protein complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0019899	enzyme binding
molecular_function	GO:0016151	nickel cation binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G167550.1	Cla97C09G167550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003823	Domain of unknown function CP12	SMART	SM01093	CP12_2	coord: 56..125 e-value: 2.2E-28 score: 110.3
IPR003823	Domain of unknown function CP12	PFAM	PF02672	CP12	coord: 56..124 e-value: 1.3E-26 score: 93.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..125
None	No IPR available	PANTHER	PTHR33921:SF10	SUBFAMILY NOT NAMED	coord: 1..125
IPR039314	Calvin cycle protein CP12-like	PANTHER	PTHR33921	FAMILY NOT NAMED	coord: 1..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C09G167550	Cla017360	Watermelon (97103) v1	wmwmbB075
Cla97C09G167550	Cla015139	Watermelon (97103) v1	wmwmbB041
Cla97C09G167550	Csa7G407670	Cucumber (Chinese Long) v2	cuwmbB572
Cla97C09G167550	Csa4G003670	Cucumber (Chinese Long) v2	cuwmbB332
Cla97C09G167550	MELO3C017917	Melon (DHL92) v3.5.1	mewmbB509
Cla97C09G167550	MELO3C015924	Melon (DHL92) v3.5.1	mewmbB209
Cla97C09G167550	ClCG10G011400	Watermelon (Charleston Gray)	wcgwmbB056
Cla97C09G167550	ClCG09G005090	Watermelon (Charleston Gray)	wcgwmbB035
Cla97C09G167550	CSPI04G01230	Wild cucumber (PI 183967)	cpiwmbB346
Cla97C09G167550	CSPI07G18140	Wild cucumber (PI 183967)	cpiwmbB598
Cla97C09G167550	Cucsa.096730	Cucumber (Gy14) v1	cgywmbB115
Cla97C09G167550	CmaCh14G009310	Cucurbita maxima (Rimu)	cmawmbB283
Cla97C09G167550	CmoCh14G009560	Cucurbita moschata (Rifu)	cmowmbB265
Cla97C09G167550	Lsi03G011110	Bottle gourd (USVL1VR-Ls)	lsiwmbB253
Cla97C09G167550	Lsi02G024770	Bottle gourd (USVL1VR-Ls)	lsiwmbB212
Cla97C09G167550	CsGy7G016600	Cucumber (Gy14) v2	cgybwmbB543
Cla97C09G167550	CsGy4G001130	Cucumber (Gy14) v2	cgybwmbB318
Cla97C09G167550	MELO3C015924.2	Melon (DHL92) v3.6.1	medwmbB194
Cla97C09G167550	MELO3C017917.2	Melon (DHL92) v3.6.1	medwmbB501
Cla97C09G167550	Carg13382	Silver-seed gourd	carwmbB0474
Cla97C09G167550	Carg11158	Silver-seed gourd	carwmbB0852
Cla97C09G167550	CsaV3_7G029960	Cucumber (Chinese Long) v3	cucwmbB594
Cla97C09G167550	CsaV3_4G001210	Cucumber (Chinese Long) v3	cucwmbB343
Cla97C09G167550	Bhi11G001062	Wax gourd	wgowmbB050
Cla97C09G167550	Bhi09G000680	Wax gourd	wgowmbB610

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C09G167550	Cla97C10G194250	Watermelon (97103) v2	wmbwmbB062

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C09G167550	Watermelon (Charleston Gray)	wcgwmbB281
Cla97C09G167550	Watermelon (97103) v1	wmwmbB420
Cla97C09G167550	Watermelon (97103) v2	wmbwmbB160
Cla97C09G167550	Silver-seed gourd	carwmbB0117
Cla97C09G167550	Silver-seed gourd	carwmbB0797
Cla97C09G167550	Cucumber (Gy14) v1	cgywmbB383
Cla97C09G167550	Cucurbita maxima (Rimu)	cmawmbB386
Cla97C09G167550	Cucurbita maxima (Rimu)	cmawmbB512
Cla97C09G167550	Cucurbita maxima (Rimu)	cmawmbB940
Cla97C09G167550	Cucurbita moschata (Rifu)	cmowmbB369
Cla97C09G167550	Cucurbita moschata (Rifu)	cmowmbB494
Cla97C09G167550	Cucurbita moschata (Rifu)	cmowmbB916