Cla97C09G166150 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C09G166150
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	60S ribosomal protein L6
Location	Cla97Chr09 : 3292933 .. 3294429 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCGGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACTAAGCTCAGGTATGGTGGCTCCATTTTTATTTATTTATTTATTTATTATTATTATTAATCTTTGCATTGAGGTCTTGATTATTTTCCACTTTGGTTGAACTATTACTCAAGCCTCTGTTCTAATCTTGGTTTTATTCCTGATTTTAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACCGGTGAGTTTGTTCCTTGTGTAATCCCGATGATTGTTTCTTGTTGTTACAGTGTGTTTATTTGATTTTGATTGGAAGATTATATTGTAATTTCTTGTCATCCGTTGGTTTCTTTCGTTTCTTTCACAAATCTGTAATATAACCTGGTTTTGCTGCCAACTTGAATCATTTCTTCTACGTAATGTTTGCATTTTAAAAGTTTTAGTGTGATCTTGTATGGTTTGCTGTCCATTAAAATGCAAACCTTTTCCTTCACTTTGTGGTGGGTTAGAGAGTGATTCTAAAATGGTTTGCTAAATCAATTTTAAGAGTATGAAAAATGTGTTTAAAAGTGTACAATTAGGCATTGAATTGATTTTAAGGGATTAAAGGTGTGTTTTTGAGTGATTTTAAACATTTCAAAATGCACTTAGTATGCAATTGCATCTGCTGAGGAATTTCTTCCATTGCCTACTTTCAATCAGTAATACCCGAATGTGATTAATTTTTTTCTCCATTGCTTGCCGCTTCTTTACTGTTTACTGCCAAGTTGAATCTTTTTATGCTGAAGGTTAAAATCTTTATGACTATAGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGTAGGAGGAGCTGGATTACACTTCTATGTCTTTCATTGTTTTAGTTGTTTTCTTTTAGCTGTCCTAATTTTTTGATTCCAACTTATTATTGTAGGAGAAGAGTGCTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTCCAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAG

mRNA sequence

ATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCGGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACCGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGAGAAGAGTGCTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTCCAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAG

Coding sequence (CDS)

ATGGCGCCCAAAATCCCCAGAGTTACAAGAAACCCGGATCTAATCCGAGGTGTCGGCAAGTACTCGAGGTCTAAGATGTATCATAAGCGGGGTCTTTGGGCCATCAAGGCCAAAAATGGCGGAGTGTTCCCTCGTCACGATGCCAAGCCGAAAGCGGATGCCCCAGCCGATAAGTCGCCGAAGTTTTACCCTGCCGATGATGTGAAGAAGCCCCTTGTTAACAAGCGCAAGGCCAAGCTCACTAAGCTCAGAGCTAGCATTACTCCTGGTACTGTGTTGATAATCCTCGCTGGGAGGTTCAAAGGGAAGAGAGTTGTGTTTTTGAAACAGCTGCCATCTGGGTTGCTTCTGGTCACCGGGCCATTCAAGATTAATGGTGTTCCTCTAAGACGAGTGAACCAATCGTATGTGATTGCAACCTCCACCAAAGTTGACATCTCTGGTGTGAACATCGAAAAGTTCGACGACAAGTACTTTTCCAAGGAAGTCCAGAAGAAGAAGAAGAAGGGTGAAGGAGAATTTTTTGAGGCAGAGAAAGAGGAGAAGAGTGCTCTCCCGGCTGAGAAGAAGGATGACCAGAAAGCTGTGGATACACCATTGATAAAGTCGATTGAGGGGGTTCCAGAGTTGAAGGCTTACTTGGGAGCAAGATTTTCTCTCAAGGCTGGAATGAAACCTCATGAGCTTGTGTTTTAG

Protein sequence

MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF

Homology

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BLAST of Cla97C09G166150 vs. NCBI nr
Match: XP_022991926.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 6.0e-119
Identity = 223/231 (96.54%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPA+KSP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIEGVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231

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BLAST of Cla97C09G166150 vs. NCBI nr
Match: XP_022954334.1 (60S ribosomal protein L6-3-like [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 1.9e-117
Identity = 221/231 (95.67%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK KADAPA+KSP
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLKADAPAEKSP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSI+GVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPADRKDDQKAVDTPLIKSIDGVPELKAYLAARFSLKAGMKPHELVF 231

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BLAST of Cla97C09G166150 vs. NCBI nr
Match: XP_023548320.1 (uncharacterized protein LOC111806995 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.0 bits (1107), Expect = 2.5e-117
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD K KADAPA+KSP
Sbjct: 521 MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDVKLKADAPAEKSP 580

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 581 KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 640

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 641 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 700

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIEGVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 701 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 751

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BLAST of Cla97C09G166150 vs. NCBI nr
Match: XP_023548319.1 (uncharacterized protein LOC111806995 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.0 bits (1107), Expect = 2.5e-117
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHD K KADAPA+KSP
Sbjct: 651 MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDVKLKADAPAEKSP 710

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 711 KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 770

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSY IATSTKVDISGVN EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 771 PFKINGVPLRRVNQSYAIATSTKVDISGVNAEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 830

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA++KDDQKAVDTPLIKSIEGVPELKAYL ARFSLKAGMKPHELVF
Sbjct: 831 EKSALPADRKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKAGMKPHELVF 881

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BLAST of Cla97C09G166150 vs. NCBI nr
Match: XP_022959727.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.5 bits (1090), Expect = 2.3e-115
Identity = 217/231 (93.94%), Postives = 223/231 (96.54%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKADA  +K P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKADAAVEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKA+LTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKARLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKV+ISGVN EKFDDKYFSKEVQKKKKK EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVEISGVNTEKFDDKYFSKEVQKKKKKSEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPA+KKDDQKAVDTPLIKSIEGVPELKAYL ARFSLK+GMKPHEL F
Sbjct: 181 EKSALPADKKDDQKAVDTPLIKSIEGVPELKAYLAARFSLKSGMKPHELAF 231

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BLAST of Cla97C09G166150 vs. TrEMBL
Match: tr|A0A0A0K9V0|A0A0A0K9V0_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.5e-115
Identity = 219/231 (94.81%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PKA APA+K P
Sbjct: 1   MAPKTPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKAAAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKINGVPLRRVNQSYVIATSTKVDISGVN EKFDDKYFSKE QKK    EGEFFEAEKE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNSEKFDDKYFSKEAQKKXXXXEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALPAEKKDDQKAVDTPLIKSIE VPELKAYLGARFSLKAGMKPHELVF
Sbjct: 181 EKSALPAEKKDDQKAVDTPLIKSIEAVPELKAYLGARFSLKAGMKPHELVF 231

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BLAST of Cla97C09G166150 vs. TrEMBL
Match: tr|F6HB97|F6HB97_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g01390 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.2e-112
Identity = 210/233 (90.13%), Postives = 224/233 (96.14%), Query Frame = 0


Query: 1   MAPK--IPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADK 60
           MAPK   P+V+RNP+LIRG+GK+SRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA APA+K
Sbjct: 1   MAPKQRTPKVSRNPNLIRGIGKHSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAPAPAEK 60

Query: 61  SPKFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 120
           SPKFYPADDVKKPLVN+ K+KLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV
Sbjct: 61  SPKFYPADDVKKPLVNRHKSKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 120

Query: 121 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAE 180
           TGPFKINGVPLRRVNQ+Y+IATSTKVDISGVN+EKFDDKYF+KE QKKKKKGEGEFFEA+
Sbjct: 121 TGPFKINGVPLRRVNQAYIIATSTKVDISGVNVEKFDDKYFAKETQKKKKKGEGEFFEAD 180

Query: 181 KEEKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           KEEKS LP EKKDDQKAVDTPLIKSIEGVP+LK YLGARFSLKAGMKPHELVF
Sbjct: 181 KEEKSVLPQEKKDDQKAVDTPLIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 233

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BLAST of Cla97C09G166150 vs. TrEMBL
Match: tr|A0A1S3CFY6|A0A1S3CFY6_CUCME (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.8e-111
Identity = 208/231 (90.04%), Postives = 218/231 (94.37%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK  RV+RNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APA+K P
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAK TKLRASITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATSTKVDI+GVN+EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALP +KKDDQK VD+ L+KSIE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cla97C09G166150 vs. TrEMBL
Match: tr|A0A0A0L9J7|A0A0A0L9J7_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 8.8e-111
Identity = 207/231 (89.61%), Postives = 220/231 (95.24%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK  RV+RNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APA+K P
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAK TKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATSTKVDI+GV++EKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALP +KKDDQKAVD+ L+KSIE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of Cla97C09G166150 vs. TrEMBL
Match: tr|A0A0A0KYA4|A0A0A0KYA4_CUCSA (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 3.7e-109
Identity = 205/231 (88.74%), Postives = 217/231 (93.94%), Query Frame = 0


Query: 1   MAPKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSP 60
           MAPK  RV+RNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD+PA+K P
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK K TKLR+SITPGTVLIIL GRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFK+NGVPLRRVNQSYVIATSTKVDI+GVN+EKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           EKSALP EKKDDQKAVD+ L+KSIE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

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BLAST of Cla97C09G166150 vs. Swiss-Prot
Match: sp|Q9C9C5|RL63_ARATH (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 9.1e-103
Identity = 191/228 (83.77%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFY 63
           + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IE VPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cla97C09G166150 vs. Swiss-Prot
Match: sp|P34091|RL6_MESCR (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.6e-102
Identity = 188/226 (83.19%), Postives = 204/226 (90.27%), Query Frame = 0


Query: 6   PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPA 65
           P V+RNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       +K PKFYPA
Sbjct: 9   PHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPA 68

Query: 66  DDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKIN 125
           DDVKKPL+NKRK K TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK+N
Sbjct: 69  DDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVN 128

Query: 126 GVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSAL 185
           GVPLRRVNQ+YVIATSTKVDISGVN+EKFDDKYF K+ +KK KKGEGEFFEAEK+E + L
Sbjct: 129 GVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVL 188

Query: 186 PAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
           P EKKDDQKAVD  L+K+IEGVPELKAYLGARFSLKAGMKPHELVF
Sbjct: 189 PQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

[Close]

BLAST of Cla97C09G166150 vs. Swiss-Prot
Match: sp|Q9C9C6|RL62_ARATH (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-101
Identity = 189/225 (84.00%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 7   RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPAD 66
           +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+
Sbjct: 9   KVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAE 68

Query: 67  DVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKING 126
           DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFKING
Sbjct: 69  DVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKING 128

Query: 127 VPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALP 186
           VPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P
Sbjct: 129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIP 188

Query: 187 AEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
             KKDDQKAVD  LIK+IE VPELK YLGARFSLK GMKPHELVF
Sbjct: 189 QGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cla97C09G166150 vs. Swiss-Prot
Match: sp|Q9FZ76|RL61_ARATH (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.7e-88
Identity = 171/230 (74.35%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 2   APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPK 61
           A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KK               
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKXXXXXXXXXXXXXXX 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
                      QK VD  LIKSIE VPELK YLGARFSL  GMKPHELVF
Sbjct: 184 XXXXXXXXXXXQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of Cla97C09G166150 vs. Swiss-Prot
Match: sp|Q6QMZ4|RL6_CHILA (60S ribosomal protein L6 OS=Chinchilla lanigera OX=34839 GN=RPL6 PE=2 SV=3)

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-44
Identity = 112/248 (45.16%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 6   PRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAD-------- 65
           P  +RNP L+RG+G+YSRS                        K K  A           
Sbjct: 42  PHCSRNPVLVRGIGRYSRSXXXXXXXXXXXXXXXXXXXVEXXKKEKVLATVTKPVGGDKN 101

Query: 66  ---------KSPKFYPADDVKKPLVNKRKAKLT----KLRASITPGTVLIILAGRFKGKR 125
                    K P++YP +DV + L++  K   +    KLRASITPGTVLIIL GR +GKR
Sbjct: 102 GGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTVLIILTGRHRGKR 161

Query: 126 VVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIATSTKVDISGVNIEK-FDDKYFSKEV 185
           VVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DIS V I K   D YF K+ 
Sbjct: 162 VVFLKQLASGLLLVTGPLNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKK 221

Query: 186 QKKKKKGEGEFFEAEKEEKSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAG 232
            +K +  EGE F+ EK E+  +  ++K DQKAVD+ ++  I+ VP+L+ YL + F+L  G
Sbjct: 222 LRKPRHQEGEIFDTEK-ERYQISEQRKVDQKAVDSQILPKIKAVPQLRGYLRSVFALTNG 281

[Close]

BLAST of Cla97C09G166150 vs. TAIR10
Match: AT1G74050.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 374.4 bits (960), Expect = 5.1e-104
Identity = 191/228 (83.77%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 4   KIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFY 63
           + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AK TKLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 INGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 183
           INGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
            +P  KKDDQKAVD  LIK+IE VPELK YLGARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cla97C09G166150 vs. TAIR10
Match: AT1G74060.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 369.4 bits (947), Expect = 1.6e-102
Identity = 189/225 (84.00%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 7   RVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPKFYPAD 66
           +V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP +K PKFYPA+
Sbjct: 9   KVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAE 68

Query: 67  DVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKING 126
           DVKKPL N+R AK  KLRASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGPFKING
Sbjct: 69  DVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKING 128

Query: 127 VPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALP 186
           VPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK  +P
Sbjct: 129 VPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIP 188

Query: 187 AEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
             KKDDQKAVD  LIK+IE VPELK YLGARFSLK GMKPHELVF
Sbjct: 189 QGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of Cla97C09G166150 vs. TAIR10
Match: AT1G18540.1 (Ribosomal protein L6 family protein)

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-89
Identity = 171/230 (74.35%), Postives = 182/230 (79.13%), Query Frame = 0


Query: 2   APKIPRVTRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPADKSPK 61
           A + P+V RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP +K  K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKLTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK K TKL+ASITPGTVLIILAGRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKINGVPLRRVNQSYVIATSTKVDISGVNIEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FKINGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KK               
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKXXXXXXXXXXXXXXX 183

Query: 182 KSALPAEKKDDQKAVDTPLIKSIEGVPELKAYLGARFSLKAGMKPHELVF 232
                      QK VD  LIKSIE VPELK YLGARFSL  GMKPHELVF
Sbjct: 184 XXXXXXXXXXXQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of Cla97C09G166150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991926.1	6.0e-119	96.54	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]
XP_022954334.1	1.9e-117	95.67	60S ribosomal protein L6-3-like [Cucurbita moschata]	[more]
XP_023548320.1	2.5e-117	95.67	uncharacterized protein LOC111806995 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023548319.1	2.5e-117	95.67	uncharacterized protein LOC111806995 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022959727.1	2.3e-115	93.94	60S ribosomal protein L6-1-like [Cucurbita moschata] >XP_023513505.1 60S ribosom...	[more]

BLAST of Cla97C09G166150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9V0\|A0A0A0K9V0_CUCSA	3.5e-115	94.81	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_7G428940 PE=3 SV=1	[more]
tr\|F6HB97\|F6HB97_VITVI	1.2e-112	90.13	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_13s0064g01390 PE=4 SV=...	[more]
tr\|A0A1S3CFY6\|A0A1S3CFY6_CUCME	6.8e-111	90.04	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]
tr\|A0A0A0L9J7\|A0A0A0L9J7_CUCSA	8.8e-111	89.61	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
tr\|A0A0A0KYA4\|A0A0A0KYA4_CUCSA	3.7e-109	88.74	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1	[more]

BLAST of Cla97C09G166150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9C5\|RL63_ARATH	9.1e-103	83.77	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
sp\|P34091\|RL6_MESCR	1.6e-102	83.19	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
sp\|Q9C9C6\|RL62_ARATH	2.9e-101	84.00	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
sp\|Q9FZ76\|RL61_ARATH	3.7e-88	74.35	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
sp\|Q6QMZ4\|RL6_CHILA	3.3e-44	45.16	60S ribosomal protein L6 OS=Chinchilla lanigera OX=34839 GN=RPL6 PE=2 SV=3	[more]

BLAST of Cla97C09G166150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G74050.1	5.1e-104	83.77	Ribosomal protein L6 family protein	[more]
AT1G74060.1	1.6e-102	84.00	Ribosomal protein L6 family protein	[more]
AT1G18540.1	2.1e-89	74.35	Ribosomal protein L6 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR000915	60S_ribosomal_L6E
IPR005568	Ribosomal_L6_N
IPR014722	Rib_L2_dom2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0009408	response to heat
biological_process	GO:0000741	karyogamy
biological_process	GO:0009561	megagametogenesis
biological_process	GO:0044703	multi-organism reproductive process
biological_process	GO:0006457	protein folding
biological_process	GO:0044702	single organism reproductive process
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0010198	synergid death
biological_process	GO:0010197	polar nucleus fusion
biological_process	GO:0003006	developmental process involved in reproduction
biological_process	GO:0000740	nuclear membrane fusion
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009558	embryo sac cellularization
biological_process	GO:0051085	chaperone mediated protein folding requiring cofactor
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0030154	cell differentiation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C09G166150.1	Cla97C09G166150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	G3DSA:2.30.30.30		coord: 85..169 e-value: 1.1E-14 score: 56.2
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 6..58 e-value: 5.7E-14 score: 51.9
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 2.6E-40 score: 137.2
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 6..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..63
None	No IPR available	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 8.22972E-80 score: 237.831
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	SSF50104	Translation proteins SH3-like domain	coord: 85..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C09G166150	Cla015267	Watermelon (97103) v1	wmwmbB041
Cla97C09G166150	Csa7G428940	Cucumber (Chinese Long) v2	cuwmbB570
Cla97C09G166150	MELO3C023525	Melon (DHL92) v3.5.1	mewmbB222
Cla97C09G166150	ClCG09G003890	Watermelon (Charleston Gray)	wcgwmbB035
Cla97C09G166150	ClCG10G012570	Watermelon (Charleston Gray)	wcgwmbB058
Cla97C09G166150	CSPI07G19510	Wild cucumber (PI 183967)	cpiwmbB596
Cla97C09G166150	CSPI03G29880	Wild cucumber (PI 183967)	cpiwmbB268
Cla97C09G166150	Cucsa.050090	Cucumber (Gy14) v1	cgywmbB030
Cla97C09G166150	CmaCh01G002110	Cucurbita maxima (Rimu)	cmawmbB509
Cla97C09G166150	CmaCh17G009380	Cucurbita maxima (Rimu)	cmawmbB387
Cla97C09G166150	CmaCh08G005480	Cucurbita maxima (Rimu)	cmawmbB941
Cla97C09G166150	CmoCh01G002230	Cucurbita moschata (Rifu)	cmowmbB492
Cla97C09G166150	CmoCh17G009130	Cucurbita moschata (Rifu)	cmowmbB370
Cla97C09G166150	CmoCh08G005390	Cucurbita moschata (Rifu)	cmowmbB917
Cla97C09G166150	Lsi02G026000	Bottle gourd (USVL1VR-Ls)	lsiwmbB213
Cla97C09G166150	CsGy7G017830	Cucumber (Gy14) v2	cgybwmbB541
Cla97C09G166150	MELO3C023525.2	Melon (DHL92) v3.6.1	medwmbB207
Cla97C09G166150	Carg18693	Silver-seed gourd	carwmbB0371
Cla97C09G166150	Carg13462	Silver-seed gourd	carwmbB0475
Cla97C09G166150	CsaV3_7G031330	Cucumber (Chinese Long) v3	cucwmbB592
Cla97C09G166150	CsaV3_3G032360	Cucumber (Chinese Long) v3	cucwmbB264
Cla97C09G166150	Bhi11G001204	Wax gourd	wgowmbB053
Cla97C09G166150	Bhi09G000502	Wax gourd	wgowmbB611

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla97C09G166150	Cla97C10G195400	Watermelon (97103) v2	wmbwmbB063

The following block(s) are covering this gene:

None