Cla97C08G159950 (gene) Watermelon (97103) v2

Overview
NameCla97C08G159950
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr08 : 26842710 .. 26842901 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTCGTAGAAAATCAGGAGGAAAAAGGAAAATATCGAAAAGTATTTGGTTCCAGTGAAAGTGAGGACCGATGACCCAGAGAAATTTACACCTAAGCGCTGCAAAAATGAAGGAATGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCCCTAGACCACTGGTGCTAA

mRNA sequence

ATGAATTCGAGGAAAAAGGAAAATATCGAAAAGTATTTGGTTCCAGTGAAAGTGAGGACCGATGACCCAGAGAAATTTACACCTAAGCGCTGCAAAAATGAAGGAATGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCCCTAGACCACTGGTGCTAA

Coding sequence (CDS)

ATGAATTCGAGGAAAAAGGAAAATATCGAAAAGTATTTGGTTCCAGTGAAAGTGAGGACCGATGACCCAGAGAAATTTACACCTAAGCGCTGCAAAAATGAAGGAATGCACCAGCCGGGAATCGAACCCGGGTCTGTACCGTGGCAGGGTACTATTCTACCCCTAGACCACTGGTGCTAA

Protein sequence

MNSRKKENIEKYLVPVKVRTDDPEKFTPKRCKNEGMHQPGIEPGSVPWQGTILPLDHWC
Homology
[Close]
BLAST of Cla97C08G159950 vs. NCBI nr
Match: KJB20865.1 (hypothetical protein B456_003G169900 [Gossypium raimondii])

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 32 KNEGMHQPGIEPGSVPWQGTILPLDHWC 60
          K  G+HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 38 KRIGLHQPGIEPGSVPWQGTILPLDHWC 65

[Close]
BLAST of Cla97C08G159950 vs. NCBI nr
Match: PNT08507.1 (hypothetical protein POPTR_013G155000v3 [Populus trichocarpa])

HSP 1 Score: 65.1 bits (157), Expect = 9.2e-08
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 20  TDDPEKFTPKRCKNEG-MHQPGIEPGSVPWQGTILPLDHWC 60
           +D P      RC +   +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 72  SDRPHHHLEHRCPHRSLLHQPGIEPGSVPWQGTILPLDHWC 112

[Close]
BLAST of Cla97C08G159950 vs. NCBI nr
Match: ESQ54421.1 (hypothetical protein EUTSA_v10027316mg, partial [Eutrema salsugineum])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 2  NSRKKENIEKYLV--PVKVRTDDPEKFTPKRCKNEGMHQPGIEPGSVPWQGTILPLDHWC 60
          N+     +E Y++     + ++  +K +  R K + +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 9  NNNSLLRLENYVLDESCSIISEPVKKISIVRVKVDKLHQPGIEPGSVPWQGTILPLDHWC 68

[Close]
BLAST of Cla97C08G159950 vs. NCBI nr
Match: PPD91301.1 (hypothetical protein GOBAR_DD11763 [Gossypium barbadense])

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-07
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 18  VRTDDPEKFTPKRCKNEGMHQPGIEPGSVPWQGTILPLDHWC 60
           V+TD  EK   ++     +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 86  VKTDKEEKNGARKALI--LHQPGIEPGSVPWQGTILPLDHWC 125

[Close]
BLAST of Cla97C08G159950 vs. NCBI nr
Match: XP_010548802.1 (PREDICTED: uncharacterized protein LOC104820128 [Tarenaya hassleriana])

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-07
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 36 MHQPGIEPGSVPWQGTILPLDHWC 60
          MHQPGIEPGSVPWQGTILPLDHWC
Sbjct: 1  MHQPGIEPGSVPWQGTILPLDHWC 24

[Close]
BLAST of Cla97C08G159950 vs. TrEMBL
Match: tr|A0A0D2RP06|A0A0D2RP06_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G169900 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-08
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 32 KNEGMHQPGIEPGSVPWQGTILPLDHWC 60
          K  G+HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 38 KRIGLHQPGIEPGSVPWQGTILPLDHWC 65

[Close]
BLAST of Cla97C08G159950 vs. TrEMBL
Match: tr|A0A2K1Y644|A0A2K1Y644_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G155000v3 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-08
Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 20  TDDPEKFTPKRCKNEG-MHQPGIEPGSVPWQGTILPLDHWC 60
           +D P      RC +   +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 72  SDRPHHHLEHRCPHRSLLHQPGIEPGSVPWQGTILPLDHWC 112

[Close]
BLAST of Cla97C08G159950 vs. TrEMBL
Match: tr|V4P4K8|V4P4K8_EUTSA (Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10027316mg PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-08
Identity = 29/60 (48.33%), Postives = 40/60 (66.67%), Query Frame = 0 

Query: 2  NSRKKENIEKYLV--PVKVRTDDPEKFTPKRCKNEGMHQPGIEPGSVPWQGTILPLDHWC 60
          N+     +E Y++     + ++  +K +  R K + +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 9  NNNSLLRLENYVLDESCSIISEPVKKISIVRVKVDKLHQPGIEPGSVPWQGTILPLDHWC 68

[Close]
BLAST of Cla97C08G159950 vs. TrEMBL
Match: tr|A0A2P5RWW7|A0A2P5RWW7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11763 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-07
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 18  VRTDDPEKFTPKRCKNEGMHQPGIEPGSVPWQGTILPLDHWC 60
           V+TD  EK   ++     +HQPGIEPGSVPWQGTILPLDHWC
Sbjct: 86  VKTDKEEKNGARKALI--LHQPGIEPGSVPWQGTILPLDHWC 125

[Close]
BLAST of Cla97C08G159950 vs. TrEMBL
Match: tr|A0A0R0LAX6|A0A0R0LAX6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G139400 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-07
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 0 

Query: 36 MHQPGIEPGSVPWQGTILPLDHWC 60
          MHQPGIEPGSVPWQGTILPLDHWC
Sbjct: 1  MHQPGIEPGSVPWQGTILPLDHWC 24

The following BLAST results are available for this feature:
BLAST of Cla97C08G159950 vs. NCBI nr
Match NameE-valueIdentityDescription
KJB20865.19.2e-0889.29hypothetical protein B456_003G169900 [Gossypium raimondii][more]
PNT08507.19.2e-0865.85hypothetical protein POPTR_013G155000v3 [Populus trichocarpa][more]
ESQ54421.11.2e-0748.33hypothetical protein EUTSA_v10027316mg, partial [Eutrema salsugineum][more]
PPD91301.12.7e-0766.67hypothetical protein GOBAR_DD11763 [Gossypium barbadense][more]
XP_010548802.13.5e-07100.00PREDICTED: uncharacterized protein LOC104820128 [Tarenaya hassleriana][more]
BLAST of Cla97C08G159950 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0D2RP06|A0A0D2RP06_GOSRA6.1e-0889.29Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_003G169900 PE=4 ... [more]
tr|A0A2K1Y644|A0A2K1Y644_POPTR6.1e-0865.85Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G155000v3 PE=... [more]
tr|V4P4K8|V4P4K8_EUTSA8.0e-0848.33Uncharacterized protein (Fragment) OS=Eutrema salsugineum OX=72664 GN=EUTSA_v100... [more]
tr|A0A2P5RWW7|A0A2P5RWW7_GOSBA1.8e-0766.67Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11763 PE=4 SV... [more]
tr|A0A0R0LAX6|A0A0R0LAX6_SOYBN2.3e-07100.00Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G139400 PE=4 SV=1[more]
BLAST of Cla97C08G159950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G159950 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G159950.1Cla97C08G159950.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..48

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G159950Watermelon (97103) v2wmbwmbB038
Cla97C08G159950Watermelon (97103) v2wmbwmbB110
Cla97C08G159950Watermelon (97103) v2wmbwmbB142
Cla97C08G159950Silver-seed gourdcarwmbB0190
Cla97C08G159950Silver-seed gourdcarwmbB0332
Cla97C08G159950Silver-seed gourdcarwmbB0401
Cla97C08G159950Silver-seed gourdcarwmbB0433
Cla97C08G159950Silver-seed gourdcarwmbB0480
Cla97C08G159950Silver-seed gourdcarwmbB0812
Cla97C08G159950Cucumber (Gy14) v2cgybwmbB156
Cla97C08G159950Cucumber (Gy14) v2cgybwmbB311
Cla97C08G159950Cucumber (Gy14) v2cgybwmbB470
Cla97C08G159950Cucumber (Gy14) v2cgybwmbB526
Cla97C08G159950Cucumber (Gy14) v1cgywmbB133
Cla97C08G159950Cucumber (Gy14) v1cgywmbB398
Cla97C08G159950Cucumber (Gy14) v1cgywmbB606
Cla97C08G159950Cucumber (Gy14) v1cgywmbB676
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB035
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB148
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB194
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB178
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB504
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB546
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB701
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB792
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB832
Cla97C08G159950Cucurbita maxima (Rimu)cmawmbB906
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB023
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB128
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB486
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB766
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB802
Cla97C08G159950Cucurbita moschata (Rifu)cmowmbB876
Cla97C08G159950Wild cucumber (PI 183967)cpiwmbB166
Cla97C08G159950Wild cucumber (PI 183967)cpiwmbB339
Cla97C08G159950Wild cucumber (PI 183967)cpiwmbB520
Cla97C08G159950Wild cucumber (PI 183967)cpiwmbB580
Cla97C08G159950Cucumber (Chinese Long) v3cucwmbB164
Cla97C08G159950Cucumber (Chinese Long) v3cucwmbB336
Cla97C08G159950Cucumber (Chinese Long) v3cucwmbB512
Cla97C08G159950Cucumber (Chinese Long) v3cucwmbB577
Cla97C08G159950Cucumber (Chinese Long) v2cuwmbB163
Cla97C08G159950Cucumber (Chinese Long) v2cuwmbB326
Cla97C08G159950Cucumber (Chinese Long) v2cuwmbB494
Cla97C08G159950Cucumber (Chinese Long) v2cuwmbB554
Cla97C08G159950Bottle gourd (USVL1VR-Ls)lsiwmbB150
Cla97C08G159950Bottle gourd (USVL1VR-Ls)lsiwmbB244
Cla97C08G159950Bottle gourd (USVL1VR-Ls)lsiwmbB304
Cla97C08G159950Bottle gourd (USVL1VR-Ls)lsiwmbB444
Cla97C08G159950Melon (DHL92) v3.6.1medwmbB190
Cla97C08G159950Melon (DHL92) v3.6.1medwmbB289
Cla97C08G159950Melon (DHL92) v3.6.1medwmbB499
Cla97C08G159950Melon (DHL92) v3.6.1medwmbB547
Cla97C08G159950Melon (DHL92) v3.5.1mewmbB206
Cla97C08G159950Melon (DHL92) v3.5.1mewmbB302
Cla97C08G159950Watermelon (97103) v1wmwmbB100
Cla97C08G159950Melon (DHL92) v3.5.1mewmbB506
Cla97C08G159950Melon (DHL92) v3.5.1mewmbB553
Cla97C08G159950Watermelon (Charleston Gray)wcgwmbB121
Cla97C08G159950Watermelon (Charleston Gray)wcgwmbB168
Cla97C08G159950Watermelon (Charleston Gray)wcgwmbB243
Cla97C08G159950Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G159950Watermelon (97103) v1wmwmbB222
Cla97C08G159950Watermelon (97103) v1wmwmbB280
Cla97C08G159950Wax gourdwgowmbB313
Cla97C08G159950Wax gourdwgowmbB444
Cla97C08G159950Wax gourdwgowmbB602