Cla97C08G158890 (gene) Watermelon (97103) v2

NameCla97C08G158890
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr08 : 26113515 .. 26114175 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGGTTTTCTCTTCTCACGCCCACTGCCAACGCTATAAATACCCCTCTCTCCCTCGCTTTTCGGACTAAAGAGGCGATTAAGCAAAGGAAAGCAGGAGACTTTTGCGGTGTCTCGCCTTTCCGGTTCTCTGGTCGAACTACACCTGGTTAGAATTCTCTGATCCGCCCCCATTCTTTTGATAATTGTATTATTATTTGCGATTCTTTCAAATCTTTACTTGATTTTCCGATTCTGCTCCATTATTCGTTGCATTTCATGTTTGGATGGTGATGATCGAAGGATCGGGGTTTATTTCTTGTACTTGAGTGATGGGTTTGTTTCGTTTCTACCTTTAGGATCGAAATTATGTAATGTTTATGTGGATGAGATCATTGATCGGCTAATTCGTTGATGGTTTTTGAACGATACTTGATCTGGGTTTTGTGAATTGTTGCCATATCCAGGTTTCCAGTTGGTTAATGTCGGGTTTGACTTTTCCTGCACCATGGTTTTCATTCGGAGGGATGTTGGTTTCCTAAGTGGAACTTTCTGTTACATCGAGCTGTGGCCTCATGGCCTGAAAGCCTTTGCCTTCATGTTGTCATCCACCTTCATCAAGTGTTGGATCTTGGATGGGAACATTTATATCAGTTCTGTTTTGTTTTTCTCATCTTAG

mRNA sequence

ATGGTTGGGTTTTCTCTTCTCACGCCCACTGCCAACGCTATAAATACCCCTCTCTCCCTCGCTTTTCGGACTAAAGAGGCGATTAAGCAAAGGAAAGCAGGAGACTTTTGCGGTGTCTCGCCTTTCCGGTTCTCTGGTCGAACTACACCTGGTTTCCAGTTGGTTAATGTCGGGTTTGACTTTTCCTGCACCATGGTTTTCATTCGGAGGGATGTTGGTTTCCTAAGTGGAACTTTCTGTTACATCGAGCTGTGGCCTCATGGCCTGAAAGCCTTTGCCTTCATGTTGTCATCCACCTTCATCAAGTGTTGGATCTTGGATGGGAACATTTATATCAGTTCTGTTTTGTTTTTCTCATCTTAG

Coding sequence (CDS)

ATGGTTGGGTTTTCTCTTCTCACGCCCACTGCCAACGCTATAAATACCCCTCTCTCCCTCGCTTTTCGGACTAAAGAGGCGATTAAGCAAAGGAAAGCAGGAGACTTTTGCGGTGTCTCGCCTTTCCGGTTCTCTGGTCGAACTACACCTGGTTTCCAGTTGGTTAATGTCGGGTTTGACTTTTCCTGCACCATGGTTTTCATTCGGAGGGATGTTGGTTTCCTAAGTGGAACTTTCTGTTACATCGAGCTGTGGCCTCATGGCCTGAAAGCCTTTGCCTTCATGTTGTCATCCACCTTCATCAAGTGTTGGATCTTGGATGGGAACATTTATATCAGTTCTGTTTTGTTTTTCTCATCTTAG

Protein sequence

MVGFSLLTPTANAINTPLSLAFRTKEAIKQRKAGDFCGVSPFRFSGRTTPGFQLVNVGFDFSCTMVFIRRDVGFLSGTFCYIELWPHGLKAFAFMLSSTFIKCWILDGNIYISSVLFFSS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G158890.1Cla97C08G158890.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C08G158890ClCG08G015320Watermelon (Charleston Gray)wcgwmbB336
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G158890Watermelon (97103) v2wmbwmbB108
Cla97C08G158890Watermelon (97103) v2wmbwmbB142
Cla97C08G158890Silver-seed gourdcarwmbB0109
Cla97C08G158890Silver-seed gourdcarwmbB0190
Cla97C08G158890Silver-seed gourdcarwmbB0996
Cla97C08G158890Silver-seed gourdcarwmbB1034
Cla97C08G158890Cucumber (Gy14) v2cgybwmbB156
Cla97C08G158890Cucumber (Gy14) v2cgybwmbB238
Cla97C08G158890Cucumber (Gy14) v1cgywmbB409
Cla97C08G158890Cucumber (Gy14) v1cgywmbB590
Cla97C08G158890Cucurbita maxima (Rimu)cmawmbB035
Cla97C08G158890Cucurbita maxima (Rimu)cmawmbB194
Cla97C08G158890Cucurbita moschata (Rifu)cmowmbB178
Cla97C08G158890Cucurbita maxima (Rimu)cmawmbB504
Cla97C08G158890Cucurbita maxima (Rimu)cmawmbB832
Cla97C08G158890Cucurbita moschata (Rifu)cmowmbB023
Cla97C08G158890Cucurbita moschata (Rifu)cmowmbB128
Cla97C08G158890Cucurbita moschata (Rifu)cmowmbB486
Cla97C08G158890Cucurbita moschata (Rifu)cmowmbB802
Cla97C08G158890Wild cucumber (PI 183967)cpiwmbB166
Cla97C08G158890Wild cucumber (PI 183967)cpiwmbB256
Cla97C08G158890Cucumber (Chinese Long) v3cucwmbB164
Cla97C08G158890Cucumber (Chinese Long) v3cucwmbB250
Cla97C08G158890Cucumber (Chinese Long) v2cuwmbB163
Cla97C08G158890Cucumber (Chinese Long) v2cuwmbB248
Cla97C08G158890Bottle gourd (USVL1VR-Ls)lsiwmbB307
Cla97C08G158890Bottle gourd (USVL1VR-Ls)lsiwmbB444
Cla97C08G158890Melon (DHL92) v3.6.1medwmbB289
Cla97C08G158890Melon (DHL92) v3.5.1mewmbB302
Cla97C08G158890Watermelon (97103) v1wmwmbB100
Cla97C08G158890Watermelon (Charleston Gray)wcgwmbB243
Cla97C08G158890Watermelon (97103) v1wmwmbB222
Cla97C08G158890Watermelon (97103) v1wmwmbB348
Cla97C08G158890Wax gourdwgowmbB313