Cla97C08G157560 (gene) Watermelon (97103) v2

Overview
NameCla97C08G157560
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionhippocampus abundant transcript-like protein 1 isoform X2
LocationCla97Chr08 : 25073504 .. 25074157 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAATTTGGAAGCTAACCCATTTGTTGGTCACAGTTTTTCTATACACTTTTGCAACCATGATGGCCTTCCCAGCCATTACAGATGTGACCATGTCGGCTCTGTGTCCCGGTCAAGACGAGTGTTCTCTCGCCATTTACTTCACCGGCTTTCAACAAGTTGTAAGTTAATTCCTAGAATGTAACTTGGTGGCTTATTTTATGTTCGATGATGCAGGAATATGAGGATATGAATAATTTATGTTTTTGAGGTACACAGGTGAGTGGGATTGGGGCGTTGCTAATGCTGCCGTTGCTCGGAAACCTCTCCGATAAGTTTGGGAGGAAGACTATTCTTACCATTCCCTTGCTTCTCACCGTTATTCCCCTCGGTTGGTGTCGCTCCACAACTCACTCTCCTACATTTTTTCTTTTTCTTAAATTATCTTTCAAACTCACATTATCCTCTATTTCATTTTATATTAATATTTTAACTATGTTCAATTTTTTTTTTTTATTTTTTATTTTGTAGGGATATTGGGATATGGGAGGTCCACAGATTTTTTCTACATCTATTTTGTGTTTAAGTGTGTCACGAGTATGGTTTGTGAAGGAAGCGTTCAATGCTTAGCCGTCGCCTATGCGGTAAGAAACTTTTCCCACGTCGACTAA

mRNA sequence

ATGGAAGAAATTTGGAAGCTAACCCATTTGTTGGTCACAGTTTTTCTATACACTTTTGCAACCATGATGGCCTTCCCAGCCATTACAGATGTGACCATGTCGGCTCTGTGTCCCGGTCAAGACGAGTGTTCTCTCGCCATTTACTTCACCGGCTTTCAACAAGTTGTGAGTGGGATTGGGGCGTTGCTAATGCTGCCGTTGCTCGGAAACCTCTCCGATAAGTTTGGGAGGAAGACTATTCTTACCATTCCCTTGCTTCTCACCGTTATTCCCCTCGGGATATTGGGATATGGGAGGTCCACAGATTTTTTCTACATCTATTTTGTGTTTAAGTGTGTCACGAGTATGGTTTGTGAAGGAAGCGTTCAATGCTTAGCCGTCGCCTATGCGGTAAGAAACTTTTCCCACGTCGACTAA

Coding sequence (CDS)

ATGGAAGAAATTTGGAAGCTAACCCATTTGTTGGTCACAGTTTTTCTATACACTTTTGCAACCATGATGGCCTTCCCAGCCATTACAGATGTGACCATGTCGGCTCTGTGTCCCGGTCAAGACGAGTGTTCTCTCGCCATTTACTTCACCGGCTTTCAACAAGTTGTGAGTGGGATTGGGGCGTTGCTAATGCTGCCGTTGCTCGGAAACCTCTCCGATAAGTTTGGGAGGAAGACTATTCTTACCATTCCCTTGCTTCTCACCGTTATTCCCCTCGGGATATTGGGATATGGGAGGTCCACAGATTTTTTCTACATCTATTTTGTGTTTAAGTGTGTCACGAGTATGGTTTGTGAAGGAAGCGTTCAATGCTTAGCCGTCGCCTATGCGGTAAGAAACTTTTCCCACGTCGACTAA

Protein sequence

MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIGALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEGSVQCLAVAYAVRNFSHVD
Homology
[Close]
BLAST of Cla97C08G157560 vs. NCBI nr
Match: XP_008445315.1 (PREDICTED: tetracycline resistance protein, class A-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEE+ KLTHLLVTVFLYTFATM AFPAI DVTMSALCPG+DECSLAIYFTGFQQVV+G+G
Sbjct: 1   MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSDKFGRKT+LTIPL+L VIPLGILGYGRS D FYIYFVFKCVTS+VCEG
Sbjct: 61  ALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFYIYFVFKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. NCBI nr
Match: KGN62273.1 (hypothetical protein Csa_2G347120 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57
Identity = 114/133 (85.71%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEE  KLTHLLVTVFLYTFATM AFPAI D+TMSALCP QDECSL IYFTGFQQVV+GIG
Sbjct: 1   MEEFLKLTHLLVTVFLYTFATMTAFPAIPDITMSALCPDQDECSLVIYFTGFQQVVTGIG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSD+FGRKT+LTIPL+L +IPLGILGYGRS + FYIYFVFKCVTS+VCEG
Sbjct: 61  ALLMMPLLGNLSDRFGRKTVLTIPLVLNIIPLGILGYGRSRELFYIYFVFKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYAV N
Sbjct: 121 SVQCLAVAYAVIN 133

[Close]
BLAST of Cla97C08G157560 vs. NCBI nr
Match: XP_008445313.1 (PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-56
Identity = 109/133 (81.95%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEEIWKL+HLL+TVFLYTFATMM  PAITDVTMSALCP QDECSLAIYFTG QQVV+G+G
Sbjct: 1   MEEIWKLSHLLMTVFLYTFATMMVIPAITDVTMSALCPDQDECSLAIYFTGLQQVVTGLG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           +LLM+PLLGNLSDKFGRKT+LTIP++L V+PLGILGYGRS  F+Y+YFV KCVTS++CEG
Sbjct: 61  SLLMMPLLGNLSDKFGRKTVLTIPMILVVLPLGILGYGRSRKFYYVYFVLKCVTSIICEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. NCBI nr
Match: XP_008445314.1 (PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56
Identity = 111/132 (84.09%), Postives = 122/132 (92.42%), Query Frame = 0 

Query: 2   EEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIGA 61
           E IWKL+HLLVT+FLYTFATMM  PAITDVTMSALCPGQDECSLAIYFTGFQQVV+GIGA
Sbjct: 3   EMIWKLSHLLVTLFLYTFATMMIVPAITDVTMSALCPGQDECSLAIYFTGFQQVVTGIGA 62

Query: 62  LLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEGS 121
           LL++PLLGNLSDK GRKT+LTIP++LTV+PLGILGYGRS   FY+YFV KCVTS+VCEGS
Sbjct: 63  LLIMPLLGNLSDKLGRKTLLTIPMILTVVPLGILGYGRSRTLFYVYFVLKCVTSIVCEGS 122

Query: 122 VQCLAVAYAVRN 134
           VQCLAVAYA  N
Sbjct: 123 VQCLAVAYAADN 134

[Close]
BLAST of Cla97C08G157560 vs. NCBI nr
Match: KGN62272.1 (hypothetical protein Csa_2G347110 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56
Identity = 111/133 (83.46%), Postives = 121/133 (90.98%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEEIWKL+HLLVT+FLYTFATMM  PAITDVTMSALCPGQDECSLAIY TGFQ  V GIG
Sbjct: 1   MEEIWKLSHLLVTLFLYTFATMMIVPAITDVTMSALCPGQDECSLAIYLTGFQHAVMGIG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSDK GRKT+LTIP++LTV+PLGILGYGRS + FY+YFV KCVTS+VCEG
Sbjct: 61  ALLMMPLLGNLSDKLGRKTLLTIPMILTVVPLGILGYGRSRNLFYVYFVLKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. TrEMBL
Match: tr|A0A1S3BD51|A0A1S3BD51_CUCME (tetracycline resistance protein, class A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488384 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.0e-58
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEE+ KLTHLLVTVFLYTFATM AFPAI DVTMSALCPG+DECSLAIYFTGFQQVV+G+G
Sbjct: 1   MEEMLKLTHLLVTVFLYTFATMTAFPAIPDVTMSALCPGRDECSLAIYFTGFQQVVTGVG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSDKFGRKT+LTIPL+L VIPLGILGYGRS D FYIYFVFKCVTS+VCEG
Sbjct: 61  ALLMVPLLGNLSDKFGRKTVLTIPLILNVIPLGILGYGRSRDLFYIYFVFKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. TrEMBL
Match: tr|A0A0A0LKE2|A0A0A0LKE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G347120 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.4e-57
Identity = 114/133 (85.71%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEE  KLTHLLVTVFLYTFATM AFPAI D+TMSALCP QDECSL IYFTGFQQVV+GIG
Sbjct: 1   MEEFLKLTHLLVTVFLYTFATMTAFPAIPDITMSALCPDQDECSLVIYFTGFQQVVTGIG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSD+FGRKT+LTIPL+L +IPLGILGYGRS + FYIYFVFKCVTS+VCEG
Sbjct: 61  ALLMMPLLGNLSDRFGRKTVLTIPLVLNIIPLGILGYGRSRELFYIYFVFKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYAV N
Sbjct: 121 SVQCLAVAYAVIN 133

[Close]
BLAST of Cla97C08G157560 vs. TrEMBL
Match: tr|A0A1S3BCD2|A0A1S3BCD2_CUCME (hippocampus abundant transcript 1 protein-like OS=Cucumis melo OX=3656 GN=LOC103488381 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 9.8e-57
Identity = 109/133 (81.95%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEEIWKL+HLL+TVFLYTFATMM  PAITDVTMSALCP QDECSLAIYFTG QQVV+G+G
Sbjct: 1   MEEIWKLSHLLMTVFLYTFATMMVIPAITDVTMSALCPDQDECSLAIYFTGLQQVVTGLG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           +LLM+PLLGNLSDKFGRKT+LTIP++L V+PLGILGYGRS  F+Y+YFV KCVTS++CEG
Sbjct: 61  SLLMMPLLGNLSDKFGRKTVLTIPMILVVLPLGILGYGRSRKFYYVYFVLKCVTSIICEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. TrEMBL
Match: tr|A0A1S3BCD9|A0A1S3BCD9_CUCME (hippocampus abundant transcript 1 protein-like OS=Cucumis melo OX=3656 GN=LOC103488383 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 111/132 (84.09%), Postives = 122/132 (92.42%), Query Frame = 0 

Query: 2   EEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIGA 61
           E IWKL+HLLVT+FLYTFATMM  PAITDVTMSALCPGQDECSLAIYFTGFQQVV+GIGA
Sbjct: 3   EMIWKLSHLLVTLFLYTFATMMIVPAITDVTMSALCPGQDECSLAIYFTGFQQVVTGIGA 62

Query: 62  LLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEGS 121
           LL++PLLGNLSDK GRKT+LTIP++LTV+PLGILGYGRS   FY+YFV KCVTS+VCEGS
Sbjct: 63  LLIMPLLGNLSDKLGRKTLLTIPMILTVVPLGILGYGRSRTLFYVYFVLKCVTSIVCEGS 122

Query: 122 VQCLAVAYAVRN 134
           VQCLAVAYA  N
Sbjct: 123 VQCLAVAYAADN 134

[Close]
BLAST of Cla97C08G157560 vs. TrEMBL
Match: tr|A0A0A0LN87|A0A0A0LN87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G347110 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 111/133 (83.46%), Postives = 121/133 (90.98%), Query Frame = 0 

Query: 1   MEEIWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDECSLAIYFTGFQQVVSGIG 60
           MEEIWKL+HLLVT+FLYTFATMM  PAITDVTMSALCPGQDECSLAIY TGFQ  V GIG
Sbjct: 1   MEEIWKLSHLLVTLFLYTFATMMIVPAITDVTMSALCPGQDECSLAIYLTGFQHAVMGIG 60

Query: 61  ALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEG 120
           ALLM+PLLGNLSDK GRKT+LTIP++LTV+PLGILGYGRS + FY+YFV KCVTS+VCEG
Sbjct: 61  ALLMMPLLGNLSDKLGRKTLLTIPMILTVVPLGILGYGRSRNLFYVYFVLKCVTSIVCEG 120

Query: 121 SVQCLAVAYAVRN 134
           SVQCLAVAYA  N
Sbjct: 121 SVQCLAVAYAADN 133

[Close]
BLAST of Cla97C08G157560 vs. TAIR10
Match: AT2G16990.1 (Major facilitator superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 5.4e-37
Identity = 72/128 (56.25%), Postives = 97/128 (75.78%), Query Frame = 0 

Query: 7   LTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDE-CSLAIYFTGFQQVVSGIGALLML 66
           L H+L TVFL  FA  M  P ITDVT++A+C G D+ CSLA+Y TGFQQV  G+G ++M+
Sbjct: 8   LRHMLATVFLSAFAGFMVVPVITDVTVAAVCSGPDDSCSLAVYLTGFQQVAIGMGTMIMM 67

Query: 67  PLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEGSVQCL 126
           P++GNLSD++G KTILT+P+ L+++P  ILGY R   FFY++++ K +TSMVCEG+V CL
Sbjct: 68  PVIGNLSDRYGIKTILTLPMCLSIVPPVILGYRRDIKFFYVFYISKILTSMVCEGTVDCL 127

Query: 127 AVAYAVRN 134
           A AY   N
Sbjct: 128 AYAYVAVN 135

[Close]
BLAST of Cla97C08G157560 vs. TAIR10
Match: AT2G16980.2 (Major facilitator superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 9.6e-34
Identity = 67/129 (51.94%), Postives = 95/129 (73.64%), Query Frame = 0 

Query: 6   KLTHLLVTVFLYTFATMMAFPAITDVTMSALCPG-QDECSLAIYFTGFQQVVSGIGALLM 65
           +L HLLVTVFL   A  +  P +TDVT++A+C G  D CSLA+Y TG QQV  G+G ++M
Sbjct: 8   ELRHLLVTVFLSGLAEYLIRPVMTDVTVAAVCSGLDDSCSLAVYLTGVQQVTVGMGTMVM 67

Query: 66  LPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSMVCEGSVQC 125
           +P++GNLSD++G K +LT+P+ L+V+P  ILGY R T+FFY ++V K +  MVC+G++ C
Sbjct: 68  MPVIGNLSDRYGIKAMLTLPMCLSVLPPAILGYRRDTNFFYAFYVIKTLFDMVCQGTIDC 127

Query: 126 LAVAYAVRN 134
           LA AY  +N
Sbjct: 128 LANAYVAKN 136

[Close]
BLAST of Cla97C08G157560 vs. TAIR10
Match: AT2G16970.1 (Major facilitator superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-27
Identity = 64/144 (44.44%), Postives = 96/144 (66.67%), Query Frame = 0 

Query: 1   MEE--IWKLTHLLVTVFLYTFATMMAFPAITDVTMSALCPGQDE-CSLAIYFTGFQQVVS 60
           MEE  + +L HLL TVFL  F+  +  P +TDVT++A+C G +E CSLA+Y TG +QV  
Sbjct: 1   MEEYRLGELRHLLTTVFLSGFSEFLVKPVMTDVTVAAVCSGLNETCSLAVYLTGVEQVTV 60

Query: 61  GIGALLMLPLLGNLSDKFGRKTILTIPLLLTVIPLGILGYGRSTDFFYIYFVFKCVTSM- 120
           G+G ++M+P++GNLSD++G KT+LT+P+ L+++P  IL Y R T+FFY +++ K +  M 
Sbjct: 61  GLGTMVMMPVIGNLSDRYGIKTLLTLPMCLSILPPAILAYRRDTNFFYAFYITKILFDMA 120

Query: 121 --VC-EGSVQCLAVAYAVRNFSHV 138
             VC    +    V   VR+ S V
Sbjct: 121 KNVCGRKRISMFGVLAGVRSISGV 144

The following BLAST results are available for this feature:
BLAST of Cla97C08G157560 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445315.11.6e-5887.97PREDICTED: tetracycline resistance protein, class A-like isoform X1 [Cucumis mel... [more]
KGN62273.15.1e-5785.71hypothetical protein Csa_2G347120 [Cucumis sativus][more]
XP_008445313.11.5e-5681.95PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis melo][more]
XP_008445314.12.5e-5684.09PREDICTED: hippocampus abundant transcript 1 protein-like [Cucumis melo][more]
KGN62272.12.5e-5683.46hypothetical protein Csa_2G347110 [Cucumis sativus][more]
BLAST of Cla97C08G157560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BD51|A0A1S3BD51_CUCME1.0e-5887.97tetracycline resistance protein, class A-like isoform X1 OS=Cucumis melo OX=3656... [more]
tr|A0A0A0LKE2|A0A0A0LKE2_CUCSA3.4e-5785.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G347120 PE=4 SV=1[more]
tr|A0A1S3BCD2|A0A1S3BCD2_CUCME9.8e-5781.95hippocampus abundant transcript 1 protein-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1S3BCD9|A0A1S3BCD9_CUCME1.7e-5684.09hippocampus abundant transcript 1 protein-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A0A0LN87|A0A0A0LN87_CUCSA1.7e-5683.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G347110 PE=4 SV=1[more]
BLAST of Cla97C08G157560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G157560 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G16990.15.4e-3756.25Major facilitator superfamily protein[more]
AT2G16980.29.6e-3451.94Major facilitator superfamily protein[more]
AT2G16970.18.7e-2744.44Major facilitator superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR011701MFS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G157560.1Cla97C08G157560.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 5..136
e-value: 3.9E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR23504:SF36MAJOR FACILITATOR PROTEINcoord: 5..133
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 5..133
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 10..136
e-value: 9.5E-9
score: 34.5
IPR036259MFS transporter superfamilySUPERFAMILYSSF103473MFS general substrate transportercoord: 11..131

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C08G157560Csa2G347120Cucumber (Chinese Long) v2cuwmbB164
Cla97C08G157560Cucsa.394040Cucumber (Gy14) v1cgywmbB677
Cla97C08G157560CsGy2G016830Cucumber (Gy14) v2cgybwmbB157
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G157560Melon (DHL92) v3.5.1mewmbB557
Cla97C08G157560Watermelon (Charleston Gray)wcgwmbB166
Cla97C08G157560Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G157560Watermelon (97103) v1wmwmbB283
Cla97C08G157560Watermelon (97103) v1wmwmbB349
Cla97C08G157560Wax gourdwgowmbB314
Cla97C08G157560Wax gourdwgowmbB445
Cla97C08G157560Watermelon (97103) v2wmbwmbB042
Cla97C08G157560Watermelon (97103) v2wmbwmbB109
Cla97C08G157560Silver-seed gourdcarwmbB0149
Cla97C08G157560Silver-seed gourdcarwmbB0432
Cla97C08G157560Silver-seed gourdcarwmbB1034
Cla97C08G157560Cucumber (Gy14) v2cgybwmbB479
Cla97C08G157560Cucumber (Gy14) v2cgybwmbB527
Cla97C08G157560Cucumber (Gy14) v1cgywmbB027
Cla97C08G157560Cucurbita maxima (Rimu)cmawmbB194
Cla97C08G157560Cucurbita moschata (Rifu)cmowmbB178
Cla97C08G157560Cucurbita maxima (Rimu)cmawmbB700
Cla97C08G157560Cucurbita maxima (Rimu)cmawmbB832
Cla97C08G157560Cucurbita maxima (Rimu)cmawmbB904
Cla97C08G157560Cucurbita moschata (Rifu)cmowmbB673
Cla97C08G157560Cucurbita moschata (Rifu)cmowmbB802
Cla97C08G157560Cucurbita moschata (Rifu)cmowmbB874
Cla97C08G157560Wild cucumber (PI 183967)cpiwmbB167
Cla97C08G157560Wild cucumber (PI 183967)cpiwmbB529
Cla97C08G157560Wild cucumber (PI 183967)cpiwmbB581
Cla97C08G157560Cucumber (Chinese Long) v3cucwmbB165
Cla97C08G157560Cucumber (Chinese Long) v3cucwmbB522
Cla97C08G157560Cucumber (Chinese Long) v2cuwmbB503
Cla97C08G157560Bottle gourd (USVL1VR-Ls)lsiwmbB104
Cla97C08G157560Bottle gourd (USVL1VR-Ls)lsiwmbB149
Cla97C08G157560Bottle gourd (USVL1VR-Ls)lsiwmbB444
Cla97C08G157560Melon (DHL92) v3.6.1medwmbB293
Cla97C08G157560Melon (DHL92) v3.6.1medwmbB551
Cla97C08G157560Melon (DHL92) v3.5.1mewmbB306
Cla97C08G157560Watermelon (97103) v1wmwmbB100