Cla97C08G152480 (gene) Watermelon (97103) v2

Overview
NameCla97C08G152480
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionATP synthase subunit b, chloroplastic
LocationCla97Chr08 : 20841863 .. 20842624 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAATCTCTCTTGAAAGTAGGTATCGTGTTGGACTTTAAAATAAATAAAAAATAACCAAGTATTTGGGCCATTTGACAACTATTTTATGTTGTTTTTTTACTTTTTAAATTAAAGTTTATAAACATTATTTTTCACATATAATTTTTTTTTTTTATTTTTGCTATTACTCCCTCTCAATGTTTTAAAAAATCAAGTGAAAACTTGAAAAGTATCTAAAAAGAAACAAGTAAATTTCTAAAACTTGATATGTTTTTAAAAAAATAGATTAAGAAAAATTCTTTGGATTGCAAGAAAAAAAAAAAAGAAACAACTTTGCTGACAATTGTTTGTTTGGTCAGAAGAGTCCTCCGAATATTCGGGTCTTGGATTAATGATCAATATTTTTTTTATTTTTCATTACATTAAAAAAGATATATGAGAATTTTCCAGAAACAATTGCAATAATTGAGCGTGAGAGCCAAATGAATCGAAAGATTCATGTTTGGTTCGGGAAGGGATCGTCGAAGTTTTGAAATGAATGGAAAGACAATCTACTTTCATTAAGTGATTTATTAGATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTCCGGGGGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCCCGCTTACGAAAAGTCGAAATGGAAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATCGAACGAGAAAAATTGAATTTGATTAATTATATATATATATATATAATTTAG

mRNA sequence

ATGGATAAAATCTCTCTTGAAAATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTCCGGGGGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCCCGCTTACGAAAAGTCGAAATGGAAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATCGAACGAGAAAAATTGAATTTGATTAATTATATATATATATATATAATTTAG

Coding sequence (CDS)

ATGGATAAAATCTCTCTTGAAAATAATCGAAAACAGAGGATCTTGAAAACAATTCAAAATTCAGAAGAACTCCGGGGGGGGGCCATTGAACAGCTGGAAAAAGCCCGGGCCCGCTTACGAAAAGTCGAAATGGAAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATCGAACGAGAAAAATTGAATTTGATTAATTATATATATATATATATAATTTAG

Protein sequence

MDKISLENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLINYIYIYII
Homology
[Close]
BLAST of Cla97C08G152480 vs. NCBI nr
Match: AHM88811.1 (ATP synthase CF0 subunit I, partial (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. NCBI nr
Match: AHM88926.1 (ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. NCBI nr
Match: AHM91109.1 (ATP synthase CF0 subunit I, partial (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. NCBI nr
Match: YP_009325975.1 (ATP synthase CF0 B subunit (chloroplast) [Citrullus lanatus] >YP_009348017.1 ATP synthase CF0 B subunit (plastid) [Citrullus mucosospermus] >YP_009420780.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus colocynthis] >YP_009431543.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus amarus] >YP_009431628.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus rehmii] >YP_009456132.1 ATP synthase CF0 B subunit (chloroplast) [Lagenaria siceraria] >APD52466.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus lanatus] >APW82447.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82532.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82617.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82702.1 ATP synthase CF0 B subunit (plastid) [Citrullus mucosospermus] >APW82787.1 ATP synthase CF0 B subunit (plastid) [Citrullus mucosospermus] >APW82872.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW82957.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83042.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83127.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83212.1 ATP synthase CF0 B subunit (plastid) [Citrullus lanatus subsp. vulgaris] >APW83297.1 ATP synthase CF0 B subunit (plastid) [Citrullus mucosospermus] >ASP44465.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus colocynthis] >ASY96162.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus amarus] >ASY96247.1 ATP synthase CF0 B subunit (chloroplast) [Citrullus rehmii] >ASY97461.1 ATP synthase CF0 B subunit (chloroplast) [Cucumis sativus var. hardwickii] >AUJ21898.1 ATP synthase CF0 B subunit (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 53  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 112

Query: 66  N 67
           N
Sbjct: 113 N 113

[Close]
BLAST of Cla97C08G152480 vs. NCBI nr
Match: YP_247585.1 (ATP synthase CF0 B subunit [Cucumis sativus] >YP_009317372.1 ATP synthase CF0 B subunit (chloroplast) [Coccinia grandis] >YP_009346471.1 ATPase subunit I (chloroplast) [Cucumis x hytivus] >Q4VZP7.1 RecName: Full=ATP synthase subunit b, chloroplastic; AltName: Full=ATP synthase F(0) sector subunit b; AltName: Full=ATPase subunit I >CAJ00744.1 ATP synthase CF0 B chain (chloroplast) [Cucumis sativus] >AAZ94638.1 ATPase subunit I (chloroplast) [Cucumis sativus] >ABI97403.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >ABI98731.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >AHM88694.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM88984.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89043.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89102.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89161.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89220.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89279.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89339.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89398.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89457.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89516.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89576.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89635.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89694.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89753.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89812.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89871.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89930.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM89989.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90048.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90107.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90166.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90225.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90284.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90343.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90402.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90461.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90520.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90579.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90638.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90697.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90756.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90815.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90874.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90933.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM90992.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM91051.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >AHM91284.1 ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria] >ALF03287.1 ATP synthase CF0 B subunit (chloroplast) [Cucumis sativus var. hardwickii] >ANF28363.1 ATP synthase CF0 B subunit (chloroplast) [Cucumis sativus var. hardwickii] >AOX15201.1 ATPase subunit I (chloroplast) [Cucumis x hytivus] >AOX48737.1 ATP synthase CF0 B subunit (chloroplast) [Coccinia grandis] >AOX48822.1 ATP synthase CF0 B subunit (chloroplast) [Coccinia grandis] >ARQ16064.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >ARQ16147.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >ARQ16230.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >ARQ16313.1 ATP synthase CF0 subunit I (chloroplast) [Cucumis sativus] >AVE15317.1 AtpF (chloroplast) [Cucumis sativus var. sativus])

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. TrEMBL
Match: tr|X2F1Z3|X2F1Z3_LAGSI (ATP synthase subunit b, chloroplastic OS=Lagenaria siceraria OX=3668 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. TrEMBL
Match: tr|A0A1P8LD68|A0A1P8LD68_CITLA (ATP synthase CF0 B subunit OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 53  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 112

Query: 66  N 67
           N
Sbjct: 113 N 113

[Close]
BLAST of Cla97C08G152480 vs. TrEMBL
Match: tr|A0A218KG26|A0A218KG26_CUCSA (ATP synthase subunit b, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. TrEMBL
Match: tr|A0A1X9Q1S9|A0A1X9Q1S9_CUCSA (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. TrEMBL
Match: tr|A0A1P8LDX5|A0A1P8LDX5_9ROSI (ATP synthase CF0 B subunit OS=Citrullus mucosospermus OX=519315 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-21
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 53  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 112

Query: 66  N 67
           N
Sbjct: 113 N 113

[Close]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match: sp|Q4VZP7|ATPF_CUCSA (ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 7.8e-24
Identity = 59/61 (96.72%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 111

Query: 66  N 67
           N
Sbjct: 112 N 112

[Close]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match: sp|A0A321|ATPF_COFAR (ATP synthase subunit b, chloroplastic OS=Coffea arabica OX=13443 GN=atpF PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.0e-23
Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRIL TI+NSEELRGGAIEQLEKAR RLRKVEMEADQFRVNGYSEIEREKLNLI
Sbjct: 58  LLDNRKQRILNTIRNSEELRGGAIEQLEKARTRLRKVEMEADQFRVNGYSEIEREKLNLI 117

Query: 66  NYIY 70
           N IY
Sbjct: 118 NSIY 121

[Close]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match: sp|Q09G60|ATPF_PLAOC (ATP synthase subunit b, chloroplastic OS=Platanus occidentalis OX=4403 GN=atpF PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRIL TI+NSEELRGGAIEQLEKARARLRKVEMEAD+FRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILSTIRNSEELRGGAIEQLEKARARLRKVEMEADEFRVNGYSEIEREKLNLI 111

Query: 66  NYIY 70
           N  Y
Sbjct: 112 NSTY 115

[Close]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match: sp|Q14FH1|ATPF_POPAL (ATP synthase subunit b, chloroplastic OS=Populus alba OX=43335 GN=atpF PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRIL TI+NSEELRGGAIEQLEKARARLRKVE+EADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLI 111

Query: 66  NYIY 70
           N  Y
Sbjct: 112 NSTY 115

[Close]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match: sp|A4GYP4|ATPF_POPTR (ATP synthase subunit b, chloroplastic OS=Populus trichocarpa OX=3694 GN=atpF PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.9e-22
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRIL TI+NSEELRGGAIEQLEKARARLRKVE+EADQFRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILNTIRNSEELRGGAIEQLEKARARLRKVEIEADQFRVNGYSEIEREKLNLI 111

Query: 66  NYIY 70
           N  Y
Sbjct: 112 NSTY 115

[Close]
BLAST of Cla97C08G152480 vs. TAIR10
Match: ATCG00130.1 (ATPase, F0 complex, subunit B/B', bacterial/chloroplast)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0 

Query: 6   LENNRKQRILKTIQNSEELRGGAIEQLEKARARLRKVEMEADQFRVNGYSEIEREKLNLI 65
           L +NRKQRIL TI+NSEELR GAI+QLE ARARLR VE EAD+FRVNGYSEIEREKLNLI
Sbjct: 52  LLDNRKQRILNTIRNSEELREGAIQQLENARARLRNVETEADKFRVNGYSEIEREKLNLI 111

Query: 66  NYIY 70
           N  Y
Sbjct: 112 NSTY 115

The following BLAST results are available for this feature:
BLAST of Cla97C08G152480 vs. NCBI nr
Match NameE-valueIdentityDescription
AHM88811.12.4e-2196.72ATP synthase CF0 subunit I, partial (chloroplast) [Lagenaria siceraria][more]
AHM88926.12.4e-2196.72ATP synthase CF0 subunit I (chloroplast) [Lagenaria siceraria][more]
AHM91109.12.4e-2196.72ATP synthase CF0 subunit I, partial (chloroplast) [Lagenaria siceraria][more]
YP_009325975.12.4e-2196.72ATP synthase CF0 B subunit (chloroplast) [Citrullus lanatus] >YP_009348017.1 ATP... [more]
YP_247585.12.4e-2196.72ATP synthase CF0 B subunit [Cucumis sativus] >YP_009317372.1 ATP synthase CF0 B ... [more]
BLAST of Cla97C08G152480 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|X2F1Z3|X2F1Z3_LAGSI1.6e-2196.72ATP synthase subunit b, chloroplastic OS=Lagenaria siceraria OX=3668 GN=atpF PE=... [more]
tr|A0A1P8LD68|A0A1P8LD68_CITLA1.6e-2196.72ATP synthase CF0 B subunit OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=atp... [more]
tr|A0A218KG26|A0A218KG26_CUCSA1.6e-2196.72ATP synthase subunit b, chloroplastic OS=Cucumis sativus var. hardwickii OX=3192... [more]
tr|A0A1X9Q1S9|A0A1X9Q1S9_CUCSA1.6e-2196.72ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV... [more]
tr|A0A1P8LDX5|A0A1P8LDX5_9ROSI1.6e-2196.72ATP synthase CF0 B subunit OS=Citrullus mucosospermus OX=519315 GN=atpF PE=3 SV=... [more]
BLAST of Cla97C08G152480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q4VZP7|ATPF_CUCSA7.8e-2496.72ATP synthase subunit b, chloroplastic OS=Cucumis sativus OX=3659 GN=atpF PE=3 SV... [more]
sp|A0A321|ATPF_COFAR5.0e-2390.63ATP synthase subunit b, chloroplastic OS=Coffea arabica OX=13443 GN=atpF PE=3 SV... [more]
sp|Q09G60|ATPF_PLAOC1.5e-2289.06ATP synthase subunit b, chloroplastic OS=Platanus occidentalis OX=4403 GN=atpF P... [more]
sp|Q14FH1|ATPF_POPAL1.9e-2289.06ATP synthase subunit b, chloroplastic OS=Populus alba OX=43335 GN=atpF PE=3 SV=1[more]
sp|A4GYP4|ATPF_POPTR1.9e-2289.06ATP synthase subunit b, chloroplastic OS=Populus trichocarpa OX=3694 GN=atpF PE=... [more]
BLAST of Cla97C08G152480 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00130.11.4e-2081.25ATPase, F0 complex, subunit B/B', bacterial/chloroplast[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0045263proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR002146ATP_synth_b/b'su_bac/chlpt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006754 ATP biosynthetic process
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006811 ion transport
cellular_component GO:0009507 chloroplast
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0009579 thylakoid
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G152480.1Cla97C08G152480.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..52
NoneNo IPR availablePANTHERPTHR34264:SF3ATP SYNTHASE SUBUNIT B, CHLOROPLASTICcoord: 8..69
NoneNo IPR availablePANTHERPTHR34264FAMILY NOT NAMEDcoord: 8..69
IPR002146ATP synthase, F0 complex, subunit b/b', bacterial/chloroplastPFAMPF00430ATP-synt_Bcoord: 9..65
e-value: 9.0E-9
score: 35.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G152480Silver-seed gourdcarwmbB0139
Cla97C08G152480Silver-seed gourdcarwmbB0191
Cla97C08G152480Cucumber (Gy14) v2cgybwmbB463
Cla97C08G152480Cucumber (Gy14) v1cgywmbB045
Cla97C08G152480Cucurbita maxima (Rimu)cmawmbB200
Cla97C08G152480Cucurbita maxima (Rimu)cmawmbB831
Cla97C08G152480Cucurbita moschata (Rifu)cmowmbB183
Cla97C08G152480Cucurbita moschata (Rifu)cmowmbB801
Cla97C08G152480Wild cucumber (PI 183967)cpiwmbB513
Cla97C08G152480Cucumber (Chinese Long) v3cucwmbB505
Cla97C08G152480Cucumber (Chinese Long) v2cuwmbB487
Cla97C08G152480Bottle gourd (USVL1VR-Ls)lsiwmbB444
Cla97C08G152480Melon (DHL92) v3.6.1medwmbB290
Cla97C08G152480Melon (DHL92) v3.5.1mewmbB303
Cla97C08G152480Watermelon (97103) v1wmwmbB100
Cla97C08G152480Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G152480Wax gourdwgowmbB327