Cla97C08G151300 (gene) Watermelon (97103) v2

Overview
NameCla97C08G151300
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr08 : 19626474 .. 19626853 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTGACCTTTCTCTATTCTACTTCTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCGCCAACTACCATTTTCGCTTAAGAAATTTCCCCATCCCTCCTCACACTTGGCCTCTTTCATCTCCTTCCTCTTCTTCATACAGTCTAACTTGTTTCTTCTATGATTCTCTGTTCATCGACAGAGTGTGTTTCGTGTTAATCCCAGCTCTTATTCTGCTTTTCATCTTCTTTGCTGCTGCATTTCAGCTTTTATTGGACTGACGATTCTGCTGGATTTTGGATGTGGGGTTTGTGTTCTTCTGTTTGATTAGGGGTTTTTGCAATCTGGGATTTCGTGGAATGAGTTGATGATTGAGTTTCTGGTGGACTTTTGA

mRNA sequence

ATGGCTTTGACCTTTCTCTATTCTACTTCTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCGCCAACTACCATTTTCGCTTAAGAAATTTCCCCATCCCTCCTCACACTTGGCCTCTTTCATCTCCTTCCTCTTCTTCATACAGTCTAACTTGTTTCTTCTATGATTCTCTGTTCATCGACAGAGGGTTTTTGCAATCTGGGATTTCGTGGAATGAGTTGATGATTGAGTTTCTGGTGGACTTTTGA

Coding sequence (CDS)

ATGGCTTTGACCTTTCTCTATTCTACTTCTTCCTTCTCATCTTCTTCCTCTCTTACACGACGCTTCGCCAACTACCATTTTCGCTTAAGAAATTTCCCCATCCCTCCTCACACTTGGCCTCTTTCATCTCCTTCCTCTTCTTCATACAGTCTAACTTGTTTCTTCTATGATTCTCTGTTCATCGACAGAGGGTTTTTGCAATCTGGGATTTCGTGGAATGAGTTGATGATTGAGTTTCTGGTGGACTTTTGA

Protein sequence

MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLTCFFYDSLFIDRGFLQSGISWNELMIEFLVDF
Homology
[Close]
BLAST of Cla97C08G151300 vs. NCBI nr
Match: KGN46065.1 (hypothetical protein Csa_6G046430 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLT 53
          MALTFLYST+SFSSSSSLTRRF NYHFRLRN PI  H W LSS  + S  +T
Sbjct: 1  MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNSPIFLHNWSLSSFLNHSLFIT 52

[Close]
BLAST of Cla97C08G151300 vs. TrEMBL
Match: tr|A0A0A0K8L2|A0A0A0K8L2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046430 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.7e-09
Identity = 38/52 (73.08%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 1  MALTFLYSTSSFSSSSSLTRRFANYHFRLRNFPIPPHTWPLSSPSSSSYSLT 53
          MALTFLYST+SFSSSSSLTRRF NYHFRLRN PI  H W LSS  + S  +T
Sbjct: 1  MALTFLYSTTSFSSSSSLTRRFPNYHFRLRNSPIFLHNWSLSSFLNHSLFIT 52

The following BLAST results are available for this feature:
BLAST of Cla97C08G151300 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46065.14.0e-0973.08hypothetical protein Csa_6G046430 [Cucumis sativus][more]
BLAST of Cla97C08G151300 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8L2|A0A0A0K8L2_CUCSA2.7e-0973.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046430 PE=4 SV=1[more]
BLAST of Cla97C08G151300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C08G151300 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G151300.1Cla97C08G151300.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C08G151300Watermelon (97103) v2wmbwmbB143
Cla97C08G151300Silver-seed gourdcarwmbB0064
Cla97C08G151300Silver-seed gourdcarwmbB0864
Cla97C08G151300Cucumber (Gy14) v2cgybwmbB464
Cla97C08G151300Cucumber (Gy14) v1cgywmbB629
Cla97C08G151300Cucurbita maxima (Rimu)cmawmbB317
Cla97C08G151300Cucurbita maxima (Rimu)cmawmbB788
Cla97C08G151300Cucurbita moschata (Rifu)cmowmbB300
Cla97C08G151300Cucurbita moschata (Rifu)cmowmbB762
Cla97C08G151300Wild cucumber (PI 183967)cpiwmbB514
Cla97C08G151300Cucumber (Chinese Long) v3cucwmbB506
Cla97C08G151300Cucumber (Chinese Long) v2cuwmbB488
Cla97C08G151300Bottle gourd (USVL1VR-Ls)lsiwmbB448
Cla97C08G151300Melon (DHL92) v3.6.1medwmbB295
Cla97C08G151300Melon (DHL92) v3.5.1mewmbB307
Cla97C08G151300Watermelon (97103) v1wmwmbB100
Cla97C08G151300Watermelon (Charleston Gray)wcgwmbB336
Cla97C08G151300Wax gourdwgowmbB329
Cla97C08G151300Wax gourdwgowmbB541