Cla97C08G150780 (gene) Watermelon (97103) v2

NameCla97C08G150780
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LocationCla97Chr08 : 19196561 .. 19198789 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGACAACCCAAATTTTGTTGGGATGAAAGAAGACGATGACACCCCAAAATCCCCCTTCCCCTTCCCTTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGGTCAACGGCAGCAAGAAACCGCCGGCTGTGGTGGTTGATGAAGGCCGAAAGGCCGACGCCGATCCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGTTGATGTCTCCGGCAAGACTTCCAATCCGGTGGTCATCTGGCAGGTTTGTCTTTCTCTTTCGTTTTTATAGAAAGTGGATGAATTTGAACTTGCTGCGCTAATGCGAATATTGCACACAAAGTGTTTGTGAATTGGACTGAACTGGCAATAGCTGTTGAGTTGACTGTTAAAACATCTCATTATATAGTGAATTGGAGGATTAGAGAACGTTTGATTTTTCTTGTCCTTTGTTCTGCCTTTCTGTGCTTATGGTTTCAACTCTTGGGTACCTAGTTTTCCCCTCCTTTATCTAATTCTTGATTAGTTTAGAACTTTAGATGATAGCTGATTGGCCTGTTTGATAGTTAATTAATGGATAGTTCTCCATGATCTTTGGATATGTGACAGGATTTCTCTCATGTACTAATGCAAATAGAGATCTAAACCTCAGCAGTCATTAGGTTGAGTAATTCCAATACACCACTGACATCTTTTGATAGCTTTTAGGGTATAAGGAATTTCCAATTTTCATAGGACATAGATAGAACAGACAGGAATCTAGATCCTAAATGCAACATGGTAAATTGTTTTCCCCGTATTGTATCAGTATTTCAGTAACATAACTAGCTGCTATCAGATTATCAATACTAGTTGCCTGGTTTTCTATCTCTTCAGATTGAATTGCCATTTTTGTTTCTAAAAATTGAGAACTAGAAAGCCAGTCTTAGAAAGTTCTTGAAAAAGGAGAGCAAAGAGATAGAAGCAATTGAGAAGAAGAAGGGTCAGAGGCAGAGCAAGCCTGATATATTTTCAAAGAGTGCAACCATTTATATCTGTGTGCTATTAGTTTCACTTTATATTCACTTGCTATATTTTGCTGTGAACGAGCTATTTAAAACTTAAAAGTTCAAATAGATCCAGAGATAAAAGGAAGTATGGAAGGGAACAGGTGCAACTAAACTTTGTGGTATAATCATACATTAAGGTCCCATTTGGCAACCGTTTCGTTTTTTGTTTTTGTTTTTGAAAATTAAACCTATTTCCTCCCGATTTCTTATATTGATTTGCATCTCTCTAAAGTGCAATAGTTGCATCTCTCTAAAGTGTAGAGAATCCCATGATTGTCAACCTTTGAAGATTCTTGGTTAAATTACAGGTTCCAGTCTCCGAACTTTCAAGTTTGTCTCATTGGTCCTTGAAGTTTAGAATGTATAATAAATCCTTGAATTTTCTATTATGCTTCACTGTCATTGAATTTTAAAAATGTCTACCTCAACTTTCAATTTTGTATAAAAAATTCCTACCAATATTAGAAAATTTTAAAACTAGCTGATCTAATAGATATAAATTGAATATTGTGCATTGAGACTCTAAATTTTCAATTTTGTGTTTTATATATGTGTGGATTTTAAAAAATGTTAAATAGGAGATAACCTATTAGACACAAAATTGAAAATTCATAGACGTATTGAACTCAGGGTCTCTTAGACAAGTACATAGAACTTATTGGATACACATTTTTTTGCCCTCGAAATCATTTAAACCAACAATAAGTTAGCTAACCACACTCCTCAATTTGGATTGATTTTCTTTTCCTGCTCTCTTTCAGTCGATGTCACTTTGTAAACCTAACAATCCCGCACTTAGAAGCTAACTCGTCAATTTCATCAATGGTATTTGTCATTTCAGACTGTTCAATGCAAACCTTGCTCTAAGAATGAACCAATTTGAGGAAATTGAAAGTTCAAAAACTAAGTGTAGAGCCTTAACTTATAATTTAACCTGGATCCTTTTAACTTGTGTTTATCTCTGCCTTGCTATTATTGTTAAAGTTTGAGCTTTTATGACTCCTGGCTTATAACATGAATCATTTCATTTGTATTAGGTATATGCCCTCGGTGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTCCAAGACGTTCAAATGATGACAATGAGGACGAGGATTCCAGGGACACCTAG

mRNA sequence

ATGGCAGACAACCCAAATTTTGTTGGGATGAAAGAAGACGATGACACCCCAAAATCCCCCTTCCCCTTCCCTTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGGTCAACGGCAGCAAGAAACCGCCGGCTGTGGTGGTTGATGAAGGCCGAAAGGCCGACGCCGATCCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGTTGATGTCTCCGGCAAGACTTCCAATCCGGTGGTCATCTGGCAGGTATATGCCCTCGGTGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTCCAAGACGTTCAAATGATGACAATGAGGACGAGGATTCCAGGGACACCTAG

Coding sequence (CDS)

ATGGCAGACAACCCAAATTTTGTTGGGATGAAAGAAGACGATGACACCCCAAAATCCCCCTTCCCCTTCCCTTGGTTCTCTTTTCTTCCCAAGTTCGACTTCCGATTGCCTCTTCCGGTCAACGGCAGCAAGAAACCGCCGGCTGTGGTGGTTGATGAAGGCCGAAAGGCCGACGCCGATCCTCAGAAGCCGGAGTTCGTGAGGTTTCCTAAAGCAGAGTTGCCCGTCGCTTCGGTGGAGGCTGAAGTTGATGTCTCCGGCAAGACTTCCAATCCGGTGGTCATCTGGCAGGTATATGCCCTCGGTGGGTTTCTAATATTGAGTTGGGCATGGGCAAGATGGAAGGAGAGAAGGCCTCCAAGACGTTCAAATGATGACAATGAGGACGAGGATTCCAGGGACACCTAG

Protein sequence

MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADADPQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKERRPPRRSNDDNEDEDSRDT
BLAST of Cla97C08G150780 vs. NCBI nr
Match: XP_004138679.1 (PREDICTED: uncharacterized protein LOC101205088 [Cucumis sativus] >KGN63041.1 hypothetical protein Csa_2G386090 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 4.5e-50
Identity = 98/116 (84.48%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M DNP FV +KED++ PKS  PFPWFSFLPKFDFRLP PVNG KKPP VVVDE RKAD D
Sbjct: 1   MEDNPKFVAVKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADND 60

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKE 117
            QKPEFVRFPKAELPVASVEAE DVSGKTSNP V+WQVYALGGFLILSWAWARWKE
Sbjct: 61  AQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKE 114

BLAST of Cla97C08G150780 vs. NCBI nr
Match: XP_008456569.1 (PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 99/117 (84.62%), Postives = 102/117 (87.18%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M DNP FV MKED++ PKS  PFPWFSFLPKFDFRLP PVNG KK P VVVDE RKAD D
Sbjct: 1   MEDNPKFVAMKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKLPPVVVDETRKADND 60

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKER 118
            QKPEFVRFPKAELPVASVEAE DVSGKTSNP V+WQVYALGGFLILSWAWARWKER
Sbjct: 61  AQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKER 115

BLAST of Cla97C08G150780 vs. NCBI nr
Match: XP_023550786.1 (uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 5.7e-45
Identity = 96/135 (71.11%), Postives = 103/135 (76.30%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M++ P  +GMKE D++PK  FPF WFSFLPKFD RLPLP+NG KKPPA V+DEG K D D
Sbjct: 74  MSETPKVIGMKE-DESPK--FPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDDD 133

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKERRPP 120
            QKPEFVRFPKA L V SVE E DVSGKTSNP VIWQVYALGGFLILSWAWARWKERR  
Sbjct: 134 AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRXX 193

Query: 121 RRSNDDNEDEDSRDT 136
                     DSRDT
Sbjct: 194 XXXXXXXXXXDSRDT 205

BLAST of Cla97C08G150780 vs. NCBI nr
Match: XP_023550789.1 (uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 5.7e-45
Identity = 96/135 (71.11%), Postives = 103/135 (76.30%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M++ P  +GMKE D++PK  FPF WFSFLPKFD RLPLP+NG KKPPA V+DEG K D D
Sbjct: 42  MSETPKVIGMKE-DESPK--FPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDDD 101

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKERRPP 120
            QKPEFVRFPKA L V SVE E DVSGKTSNP VIWQVYALGGFLILSWAWARWKERR  
Sbjct: 102 AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRXX 161

Query: 121 RRSNDDNEDEDSRDT 136
                     DSRDT
Sbjct: 162 XXXXXXXXXXDSRDT 173

BLAST of Cla97C08G150780 vs. NCBI nr
Match: XP_022993210.1 (uncharacterized protein LOC111489298 [Cucurbita maxima] >XP_022993211.1 uncharacterized protein LOC111489298 [Cucurbita maxima])

HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 94/135 (69.63%), Postives = 104/135 (77.04%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M+++P  +G+KE +++PK  FPF WFSFLPKFD RLPLP+NG KKPPA V+DEG K D D
Sbjct: 1   MSESPKVIGIKE-EESPK--FPFTWFSFLPKFDLRLPLPINGGKKPPATVMDEGPKDDED 60

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKERRPP 120
            QKPEFVRFPKA L V SVE E DVSGKTSNP VIWQVYALGGFLILSWAWARWKERR  
Sbjct: 61  AQKPEFVRFPKANLAVPSVEVEADVSGKTSNPAVIWQVYALGGFLILSWAWARWKERRXX 120

Query: 121 RRSNDDNEDEDSRDT 136
                     DSRDT
Sbjct: 121 XXXXXXXXXXDSRDT 132

BLAST of Cla97C08G150780 vs. TrEMBL
Match: tr|A0A0A0LSR5|A0A0A0LSR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.0e-50
Identity = 98/116 (84.48%), Postives = 102/116 (87.93%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M DNP FV +KED++ PKS  PFPWFSFLPKFDFRLP PVNG KKPP VVVDE RKAD D
Sbjct: 1   MEDNPKFVAVKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKPPPVVVDESRKADND 60

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKE 117
            QKPEFVRFPKAELPVASVEAE DVSGKTSNP V+WQVYALGGFLILSWAWARWKE
Sbjct: 61  AQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKE 114

BLAST of Cla97C08G150780 vs. TrEMBL
Match: tr|A0A1S3C3J3|A0A1S3C3J3_CUCME (uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-50
Identity = 99/117 (84.62%), Postives = 102/117 (87.18%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKADAD 60
           M DNP FV MKED++ PKS  PFPWFSFLPKFDFRLP PVNG KK P VVVDE RKAD D
Sbjct: 1   MEDNPKFVAMKEDENNPKS--PFPWFSFLPKFDFRLPFPVNGGKKLPPVVVDETRKADND 60

Query: 61  PQKPEFVRFPKAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWAWARWKER 118
            QKPEFVRFPKAELPVASVEAE DVSGKTSNP V+WQVYALGGFLILSWAWARWKER
Sbjct: 61  AQKPEFVRFPKAELPVASVEAEADVSGKTSNPAVVWQVYALGGFLILSWAWARWKER 115

BLAST of Cla97C08G150780 vs. TrEMBL
Match: tr|A0A2I4GN91|A0A2I4GN91_9ROSI (uncharacterized protein LOC109009365 OS=Juglans regia OX=51240 GN=LOC109009365 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 63/144 (43.75%), Postives = 78/144 (54.17%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVV--------- 60
           MA+N   V  KED   PKS      FS  PKF   LP    G K    VV          
Sbjct: 1   MAENTQIVSSKEDPKAPKS-----LFSLFPKFKLELPFLKPGPKPEVRVVEEVKGEIVIG 60

Query: 61  -DEGRKADADPQKPEFVRFP--KAELPVASVEAEVDVSGKTSNPVVIWQVYALGGFLILS 120
            DEG  A+   QKP+ VRF   +A +P   V    + S KTSNPV++WQVYALGGFL+L 
Sbjct: 61  GDEG--AETTNQKPDVVRFSERRALVPAPLVTEAEESSAKTSNPVILWQVYALGGFLVLR 120

Query: 121 WAWARWKERRPPRRSNDDNEDEDS 133
           W WARW+ERR  + S++ + +E S
Sbjct: 121 WIWARWQERRGKKGSSESDNEESS 137

BLAST of Cla97C08G150780 vs. TrEMBL
Match: tr|M5X109|M5X109_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G091100 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.7e-18
Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPLPVNGSKKPPAVVVDEGRKA--- 60
           MA+N   V  +ED   PK+      FS  PKF  + P  +    K    V DE  KA   
Sbjct: 1   MAENTEIVSKEEDPKGPKN-----LFSLFPKFKLQFPF-LKQEPKAGVAVEDEPMKAVAG 60

Query: 61  ----DADPQKPEFVRFPKAEL---PVASVEAEVDVSGKTSNPVVIWQVYALGGFLILSWA 119
               ++  QKP+ VRFPKA+L   P  +VE E + S KTSNP+++WQVYA+GGFL+L W 
Sbjct: 61  DEGLESKTQKPDTVRFPKAQLVVPPPVAVENE-EPSTKTSNPIILWQVYAIGGFLVLRWI 120

BLAST of Cla97C08G150780 vs. TrEMBL
Match: tr|A9PAB2|A9PAB2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G233400v3 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 59/139 (42.45%), Postives = 85/139 (61.15%), Query Frame = 0

Query: 1   MADNPNFVGMKEDDDTPKSPFPFPWFSFLPKFDFRLPL---PVNGSKKPPAV-VVDEGRK 60
           MA+  N   + + D + K   P   FS  PKF+ ++P    PV  +K+ P + VV EG +
Sbjct: 1   MAETENSKIVTQKDSSQK---PGNLFSIFPKFELKVPFFNKPVPLAKEEPKIAVVTEGGE 60

Query: 61  ADADPQKPEFVRFPKA-ELPVASVEAEVDV-SGKTSNPVVIWQVYALGGFLILSWAWARW 120
            ++  QKP  V FP    L  +S+E EV+  SG+T NPV+IWQVYALGGF++L W WARW
Sbjct: 61  NESGIQKPNIVSFPNTRSLAPSSIEVEVEEGSGRTHNPVIIWQVYALGGFIVLKWIWARW 120

Query: 121 KER--RPPRRSNDDNEDED 132
           +ER  +  + S+DD++  D
Sbjct: 121 QERNEKAKKASSDDDQSND 136

BLAST of Cla97C08G150780 vs. TAIR10
Match: AT3G52230.1 (unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12
Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0

Query: 45  KPPAVVVDEGRKADADPQKP-----EFVRF----PKAELPVASVEAEVDVSGKTSNPVVI 104
           KPP   +D         ++P     E V F    PK+  P+   EAE   SG+TSN V++
Sbjct: 36  KPPPATIDANAPKPTGEKEPLKSTYETVTFPYNPPKSAEPI-KFEAEPS-SGRTSNSVIL 95

Query: 105 WQVYALGGFLILSWAWARWKER 118
           WQVYALGGFL+L WAWARW ER
Sbjct: 96  WQVYALGGFLVLKWAWARWNER 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004138679.14.5e-5084.48PREDICTED: uncharacterized protein LOC101205088 [Cucumis sativus] >KGN63041.1 hy... [more]
XP_008456569.11.0e-4984.62PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo][more]
XP_023550786.15.7e-4571.11uncharacterized protein LOC111808822 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023550789.15.7e-4571.11uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_022993210.12.8e-4469.63uncharacterized protein LOC111489298 [Cucurbita maxima] >XP_022993211.1 uncharac... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LSR5|A0A0A0LSR5_CUCSA3.0e-5084.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386090 PE=4 SV=1[more]
tr|A0A1S3C3J3|A0A1S3C3J3_CUCME6.6e-5084.62uncharacterized protein LOC103496485 OS=Cucumis melo OX=3656 GN=LOC103496485 PE=... [more]
tr|A0A2I4GN91|A0A2I4GN91_9ROSI1.8e-1843.75uncharacterized protein LOC109009365 OS=Juglans regia OX=51240 GN=LOC109009365 P... [more]
tr|M5X109|M5X109_PRUPE6.7e-1845.31Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G091100 PE=4 SV=1[more]
tr|A9PAB2|A9PAB2_POPTR1.9e-1742.45Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G233400v3 PE=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT3G52230.12.0e-1247.56unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0044434 chloroplast part
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C08G150780.1Cla97C08G150780.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36374FAMILY NOT NAMEDcoord: 16..130

The following gene(s) are paralogous to this gene:

None