Cla97C08G147930 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G147930
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Pentatricopeptide repeat-containing family protein
Location	Cla97Chr08 : 14933033 .. 14934037 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAGCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAACGGGCATTTCTTTGAAGTATTGCGTTGTTTCAAACGAATGCTAATCGATGGCCTTGTTGTTCCCAATGATGCCACCCTTGTCGCTGTGCTATCCGCTTGTGCAAGACTAGGAGCTCTCGACTTGGGAAAGTGGGTGCATGTATACGCTGCGACAATTGGGTTTAAAGGAAACGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTCGGAAGCATGGATTTAAAAGACCTTATTACTTGGAACTCTGTAATTTGTGGTTTGGCAACTCATGGAAGTGGGGCAGATGCATTAACTTTGTTTCATCAAATGAAGATCACTGGCGAAAAACCAGATGGGATCACCTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGGTCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTCGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAGGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTGTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTTTCAAATATATATGGAGATCTTGGTAGATGGAAAGATGTTGCACGACTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTAGTTGAGTTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAGATCTATGGAGTTTTAAAGGGATTGATGAAATTGTTAAGATCATTTGGGTATGAACCAAATATTGTGGAACTCCAGCAGGGATCATGA

mRNA sequence

ATGCCTGAGCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAACGGGCATTTCTTTGAAGTATTGCGTTGTTTCAAACGAATGCTAATCGATGGCCTTGTTGTTCCCAATGATGCCACCCTTGTCGCTGTGCTATCCGCTTGTGCAAGACTAGGAGCTCTCGACTTGGGAAAGTGGGTGCATGTATACGCTGCGACAATTGGGTTTAAAGGAAACGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTCGGAAGCATGGATTTAAAAGACCTTATTACTTGGAACTCTGTAATTTGTGGTTTGGCAACTCATGGAAGTGGGGCAGATGCATTAACTTTGTTTCATCAAATGAAGATCACTGGCGAAAAACCAGATGGGATCACCTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGGTCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTCGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAGGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTGTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTTTCAAATATATATGGAGATCTTGGTAGATGGAAAGATGTTGCACGACTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTAGTTGAGTTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAGATCTATGGAGTTTTAAAGGGATTGATGAAATTGTTAAGATCATTTGGGTATGAACCAAATATTGTGGAACTCCAGCAGGGATCATGA

Coding sequence (CDS)

ATGCCTGAGCGGAATGTTTTCTCCTGGAATGGATTGATTGGAGGATATGCTCATAACGGGCATTTCTTTGAAGTATTGCGTTGTTTCAAACGAATGCTAATCGATGGCCTTGTTGTTCCCAATGATGCCACCCTTGTCGCTGTGCTATCCGCTTGTGCAAGACTAGGAGCTCTCGACTTGGGAAAGTGGGTGCATGTATACGCTGCGACAATTGGGTTTAAAGGAAACGTTTATGTTGGAAACGCATTGATAGACATGTATTCAAAATGTGGTGTAATAGAGAATGCAATGGAAGTTTTCGGAAGCATGGATTTAAAAGACCTTATTACTTGGAACTCTGTAATTTGTGGTTTGGCAACTCATGGAAGTGGGGCAGATGCATTAACTTTGTTTCATCAAATGAAGATCACTGGCGAAAAACCAGATGGGATCACCTTCATTGGGGTGTTGTGCTCCTGTACCCATCTTGGGTTAGTTGAAGAAGGCATCTCTTATTTCAACTCAATGGTCCATGACTACTCAATTACGCCTCAGATTGAGCATTATGGTTGTATGGTCGATCTATTTGGCCGAGCTGGTCTTTTGGACCGAGCAATTGAGTTTGTGAGGAGGATGCCAATGGAAGCAGATGCTGTCATCTGGGCTGCTGTACTAGGTGCATGCAGGATTTACAAAAACATAGATCTGGCTGAGTTAGCTCTTCAAAAACTCATTCAGCTTGAACCCAAAAACCCTGCAAACTATGTCATGCTTTCAAATATATATGGAGATCTTGGTAGATGGAAAGATGTTGCACGACTGAAGATTTTAATGAGGGATACCGGGTCCAAAAAATTGCCAGGATGTAGCTTGATTGAGGTGAATGATAGCGTAGTTGAGTTTTATTCCTTAGATGAGAGGCATTCTCAGAGCAAGGAGATCTATGGAGTTTTAAAGGGATTGATGAAATTGTTAAGATCATTTGGGTATGAACCAAATATTGTGGAACTCCAGCAGGGATCATGA

Protein sequence

MPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQGS

Homology

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BLAST of Cla97C08G147930 vs. NCBI nr
Match: XP_023549948.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.6 bits (1568), Expect = 1.3e-170
Identity = 294/312 (94.23%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 22  FFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGN 81
           FFEVL CFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGN
Sbjct: 226 FFEVLGCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGN 285

Query: 82  ALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKP 141
           ALIDMYSKCGVIENAMEVFGSMD KD+ITWNSVICGLATHG GADAL LFHQMK+TGEKP
Sbjct: 286 ALIDMYSKCGVIENAMEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKMTGEKP 345

Query: 142 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEF 201
           DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEF
Sbjct: 346 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEF 405

Query: 202 VRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRW 261
           V+RMPMEADAVIWAA+LGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRW
Sbjct: 406 VKRMPMEADAVIWAALLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRW 465

Query: 262 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSF 321
           KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSF
Sbjct: 466 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSEEIYGVLKGLMKLLRSF 525

Query: 322 GYEPNIVELQQG 334
           GYEPNI+EL QG
Sbjct: 526 GYEPNIMELLQG 537

[Close]

BLAST of Cla97C08G147930 vs. NCBI nr
Match: XP_022938516.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 605.9 bits (1561), Expect = 8.2e-170
Identity = 293/312 (93.91%), Postives = 303/312 (97.12%), Query Frame = 0


Query: 22  FFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGN 81
           FFEVL CFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGN
Sbjct: 226 FFEVLGCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGN 285

Query: 82  ALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKP 141
           ALIDMYSKCGVIENAMEVFGSMD KD+ITWNSVICGLATHG GADAL LFHQMKITG KP
Sbjct: 286 ALIDMYSKCGVIENAMEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKITGVKP 345

Query: 142 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEF 201
           DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEF
Sbjct: 346 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEF 405

Query: 202 VRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRW 261
           V+RMPMEADAVIWAA+LGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRW
Sbjct: 406 VKRMPMEADAVIWAALLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRW 465

Query: 262 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSF 321
           KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHS+S+EIYGVLKGLMKLLRSF
Sbjct: 466 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSESEEIYGVLKGLMKLLRSF 525

Query: 322 GYEPNIVELQQG 334
           GYEPNI+EL QG
Sbjct: 526 GYEPNIMELLQG 537

[Close]

BLAST of Cla97C08G147930 vs. NCBI nr
Match: XP_022994015.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 605.1 bits (1559), Expect = 1.4e-169
Identity = 293/312 (93.91%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 22  FFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGN 81
           FFEVL CFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGN
Sbjct: 226 FFEVLGCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGN 285

Query: 82  ALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKP 141
           ALIDMYSKCGVIENAMEVFGSMD KD+ITWNSVICGLATHG GADAL LFHQMKITG KP
Sbjct: 286 ALIDMYSKCGVIENAMEVFGSMDSKDVITWNSVICGLATHGCGADALNLFHQMKITGVKP 345

Query: 142 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEF 201
           DGITFIGVLCSCTHLGLVEEG SYFNSMVHDYSI PQIEHYGCMVDLFGRAGLLDRAIEF
Sbjct: 346 DGITFIGVLCSCTHLGLVEEGTSYFNSMVHDYSIVPQIEHYGCMVDLFGRAGLLDRAIEF 405

Query: 202 VRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRW 261
           V+RMPMEADAVIWAA+LGACRI+KNIDL ELALQKLIQLEPKNPANYVMLSNIYGD+GRW
Sbjct: 406 VKRMPMEADAVIWAALLGACRIHKNIDLGELALQKLIQLEPKNPANYVMLSNIYGDVGRW 465

Query: 262 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSF 321
           KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSF
Sbjct: 466 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSEEIYGVLKGLMKLLRSF 525

Query: 322 GYEPNIVELQQG 334
           GYEPNI+EL QG
Sbjct: 526 GYEPNIMELLQG 537

[Close]

BLAST of Cla97C08G147930 vs. NCBI nr
Match: XP_011656468.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] >KGN45892.1 hypothetical protein Csa_6G017080 [Cucumis sativus])

HSP 1 Score: 602.8 bits (1553), Expect = 7.0e-169
Identity = 292/311 (93.89%), Postives = 303/311 (97.43%), Query Frame = 0


Query: 24  EVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNAL 83
           EVLRCFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNAL
Sbjct: 228 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 287

Query: 84  IDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDG 143
           IDMYSKCG+IENAMEVF SMDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDG
Sbjct: 288 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 347

Query: 144 ITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVR 203
           ITFIGVLCSCTHLGLVEEG SYFNSMV++YSI PQIEHYGCMVDLFGRAGLLDRAIEFV+
Sbjct: 348 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 407

Query: 204 RMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKD 263
           RMPMEADAVIWAA+LGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKD
Sbjct: 408 RMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKD 467

Query: 264 VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 323
           VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY
Sbjct: 468 VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 527

Query: 324 EPNIVELQQGS 335
           EPN++EL QGS
Sbjct: 528 EPNMMELLQGS 538

[Close]

BLAST of Cla97C08G147930 vs. NCBI nr
Match: XP_016901901.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucumis melo])

HSP 1 Score: 600.1 bits (1546), Expect = 4.5e-168
Identity = 290/310 (93.55%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 25  VLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALI 84
           VLRCFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALI
Sbjct: 284 VLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALI 343

Query: 85  DMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGI 144
           DMYSKCGVIENAMEVF SMDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGI
Sbjct: 344 DMYSKCGVIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGI 403

Query: 145 TFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRR 204
           TFIGVLCSCTHLGLVEEG SYFNSMV++YSITPQIEHYGCMVDLFGRAGLLDRAI+FV+R
Sbjct: 404 TFIGVLCSCTHLGLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKR 463

Query: 205 MPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDV 264
           MPMEADAVIWAA+LGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDV
Sbjct: 464 MPMEADAVIWAALLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDV 523

Query: 265 ARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYE 324
           ARLKILMRDTG KKLPGCSLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSFGYE
Sbjct: 524 ARLKILMRDTGCKKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYE 583

Query: 325 PNIVELQQGS 335
           PNI+ELQQ S
Sbjct: 584 PNIMELQQAS 593

[Close]

BLAST of Cla97C08G147930 vs. TrEMBL
Match: tr|A0A0A0KBY4|A0A0A0KBY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 4.6e-169
Identity = 292/311 (93.89%), Postives = 303/311 (97.43%), Query Frame = 0


Query: 24  EVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNAL 83
           EVLRCFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNAL
Sbjct: 228 EVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNAL 287

Query: 84  IDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDG 143
           IDMYSKCG+IENAMEVF SMDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDG
Sbjct: 288 IDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDG 347

Query: 144 ITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVR 203
           ITFIGVLCSCTHLGLVEEG SYFNSMV++YSI PQIEHYGCMVDLFGRAGLLDRAIEFV+
Sbjct: 348 ITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVK 407

Query: 204 RMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKD 263
           RMPMEADAVIWAA+LGACRIYKNIDLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKD
Sbjct: 408 RMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKD 467

Query: 264 VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 323
           VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY
Sbjct: 468 VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 527

Query: 324 EPNIVELQQGS 335
           EPN++EL QGS
Sbjct: 528 EPNMMELLQGS 538

[Close]

BLAST of Cla97C08G147930 vs. TrEMBL
Match: tr|A0A1S4E0Z4|A0A1S4E0Z4_CUCME (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497177 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 3.0e-168
Identity = 290/310 (93.55%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 25  VLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALI 84
           VLRCFKRMLIDGLVVPNDATLV VLSACARLGALDLGKWVHVYAATIGFKG++YVGNALI
Sbjct: 284 VLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALI 343

Query: 85  DMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGI 144
           DMYSKCGVIENAMEVF SMDLKDLITWNS+ICGLATHG GADALTLFHQMKI GEKPDGI
Sbjct: 344 DMYSKCGVIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGI 403

Query: 145 TFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRR 204
           TFIGVLCSCTHLGLVEEG SYFNSMV++YSITPQIEHYGCMVDLFGRAGLLDRAI+FV+R
Sbjct: 404 TFIGVLCSCTHLGLVEEGTSYFNSMVNEYSITPQIEHYGCMVDLFGRAGLLDRAIDFVKR 463

Query: 205 MPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDV 264
           MPMEADAVIWAA+LGACRIYKN+DLAELALQKLI LEPKNPANYV+LSNIYGDLGRWKDV
Sbjct: 464 MPMEADAVIWAALLGACRIYKNLDLAELALQKLILLEPKNPANYVLLSNIYGDLGRWKDV 523

Query: 265 ARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYE 324
           ARLKILMRDTG KKLPGCSLIEVNDSVVEFYSLDERHSQS+EIYGVLKGLMKLLRSFGYE
Sbjct: 524 ARLKILMRDTGCKKLPGCSLIEVNDSVVEFYSLDERHSQSQEIYGVLKGLMKLLRSFGYE 583

Query: 325 PNIVELQQGS 335
           PNI+ELQQ S
Sbjct: 584 PNIMELQQAS 593

[Close]

BLAST of Cla97C08G147930 vs. TrEMBL
Match: tr|A0A2C9VPV7|A0A2C9VPV7_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G067200 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 4.5e-140
Identity = 237/313 (75.72%), Postives = 276/313 (88.18%), Query Frame = 0


Query: 22  FFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGN 81
           FFEVL  FKRML+DG VVPNDATLV VLSACARLGALDLGKWVHVYA + G+KGNVYV N
Sbjct: 226 FFEVLSSFKRMLVDGNVVPNDATLVTVLSACARLGALDLGKWVHVYAESNGYKGNVYVEN 285

Query: 82  ALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKP 141
           ALIDMY+KCG++ENA+ VF SMD+KDLI+WN++I GLA HG GADAL+LF QMK  GEKP
Sbjct: 286 ALIDMYAKCGILENAIGVFKSMDMKDLISWNTMIGGLAVHGRGADALSLFSQMKNAGEKP 345

Query: 142 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEF 201
           DGITF+GVLC+C+H+GL+E+G +YF SM+ DYSI PQIEHYGCMVDL  RAGLL +A++F
Sbjct: 346 DGITFLGVLCACSHMGLIEDGFAYFQSMIDDYSIVPQIEHYGCMVDLLARAGLLVQAVDF 405

Query: 202 VRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRW 261
           V++MPMEADAVIWAA+LGACR+YKN++LAELAL+KLI+ EPKNPANYVMLSNIYGDLGRW
Sbjct: 406 VKKMPMEADAVIWAALLGACRVYKNVELAELALEKLIKFEPKNPANYVMLSNIYGDLGRW 465

Query: 262 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSF 321
           KDVARLK+ MRDTG +KLPGCSLIEVND V EFYSLDER  +S+ IYG L+GL KLL+S 
Sbjct: 466 KDVARLKVAMRDTGFRKLPGCSLIEVNDGVFEFYSLDERQPESELIYGTLRGLTKLLKSS 525

Query: 322 GYEPNIVELQQGS 335
           GY P+ VEL + S
Sbjct: 526 GYVPDFVELGKSS 538

[Close]

BLAST of Cla97C08G147930 vs. TrEMBL
Match: tr|A0A061G8Y2|A0A061G8Y2_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_027251 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 2.2e-139
Identity = 239/312 (76.60%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 22  FFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGN 81
           F EVL  FKRMLIDG V+PNDATLV VLSACA+LGALDLGKWVHVYA   G+KGNVYVGN
Sbjct: 227 FVEVLDTFKRMLIDGNVLPNDATLVTVLSACAKLGALDLGKWVHVYAENNGYKGNVYVGN 286

Query: 82  ALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKP 141
           ALID+Y+KCG+I+NA+++F SMD KDLI+WN++I GLA HG GADAL LF+QMK  G  P
Sbjct: 287 ALIDLYAKCGMIKNAVDMFKSMDKKDLISWNTIIGGLAMHGHGADALDLFYQMKNGGMNP 346

Query: 142 DGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEF 201
           DGITFIGVLC+CTH+GLVE+GISYF SMV DYSI PQIEHYGCMVDL  RAGLL +A++F
Sbjct: 347 DGITFIGVLCACTHMGLVEDGISYFLSMVDDYSIQPQIEHYGCMVDLLARAGLLPQALDF 406

Query: 202 VRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRW 261
           V++MPMEADAVIWAA+LGACR+YKN++ AELAL+ LI LEPKNP N+VML+NIYGDLGRW
Sbjct: 407 VKKMPMEADAVIWAALLGACRVYKNVEFAELALEHLITLEPKNPVNFVMLANIYGDLGRW 466

Query: 262 KDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSF 321
           KDVARLK+ MRDTG KKLPGCSLIEVND VVEFYSLDERH ++KEIYG L+GL KLLRS 
Sbjct: 467 KDVARLKVAMRDTGRKKLPGCSLIEVNDGVVEFYSLDERHPETKEIYGALRGLTKLLRSC 526

Query: 322 GYEPNIVELQQG 334
           GY P++ EL QG
Sbjct: 527 GYIPDLQELGQG 538

[Close]

BLAST of Cla97C08G147930 vs. TrEMBL
Match: tr|A0A251R6S1|A0A251R6S1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G312300 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.4e-138
Identity = 235/311 (75.56%), Postives = 272/311 (87.46%), Query Frame = 0


Query: 24  EVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNAL 83
           +VL  FKRML +  V+PNDATLV VLSACARLGALDLGKWVHVYA +IG+K NV+VGNAL
Sbjct: 150 QVLGSFKRMLSESDVLPNDATLVTVLSACARLGALDLGKWVHVYAESIGYKRNVFVGNAL 209

Query: 84  IDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDG 143
           IDMY+KCG+I+NA++VF SMD KDLITWN++ICGLA HG GADAL LF QMK  GE PDG
Sbjct: 210 IDMYAKCGIIDNALDVFKSMDNKDLITWNTIICGLAMHGRGADALNLFRQMKNYGENPDG 269

Query: 144 ITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVR 203
           ITFIG+LCSCTHLGLVE+G+ YF SMV DYSI PQIEHYGCMVDL GR+GLLD+A+ FVR
Sbjct: 270 ITFIGILCSCTHLGLVEDGLLYFQSMVDDYSIVPQIEHYGCMVDLLGRSGLLDQAMNFVR 329

Query: 204 RMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKD 263
           +MPME DAVIWAA+LGACRIYKNI+ AELAL++LI+LEPKNPANYVMLSNIYGDLGRW+D
Sbjct: 330 KMPMEPDAVIWAALLGACRIYKNIEFAELALERLIELEPKNPANYVMLSNIYGDLGRWRD 389

Query: 264 VARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGY 323
           VARLK+ MRDTG KK+PG S IE ND VVEFYSLDERH +++EIYG L+GL KLL+S GY
Sbjct: 390 VARLKVAMRDTGYKKVPGVSFIEANDGVVEFYSLDERHPETEEIYGALRGLTKLLKSSGY 449

Query: 324 EPNIVELQQGS 335
            P+ ++L  G+
Sbjct: 450 VPDFLDLGHGA 460

[Close]

BLAST of Cla97C08G147930 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.7e-86
Identity = 150/334 (44.91%), Postives = 219/334 (65.57%), Query Frame = 0


Query: 1   MPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDL 60
           +P ++V SWN LIGGY H   + E L  F+ ML  G   PND T++++L ACA LGA+D+
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDI 386

Query: 61  GKWVHVY--AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGL 120
           G+W+HVY      G      +  +LIDMY+KCG IE A +VF S+  K L +WN++I G 
Sbjct: 387 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 446

Query: 121 ATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQ 180
           A HG    +  LF +M+  G +PD ITF+G+L +C+H G+++ G   F +M  DY +TP+
Sbjct: 447 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 506

Query: 181 IEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLI 240
           +EHYGCM+DL G +GL   A E +  M ME D VIW ++L AC+++ N++L E   + LI
Sbjct: 507 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 566

Query: 241 QLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLD 300
           ++EP+NP +YV+LSNIY   GRW +VA+ + L+ D G KK+PGCS IE++  V EF   D
Sbjct: 567 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 626

Query: 301 ERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQ 333
           + H +++EIYG+L+ +  LL   G+ P+  E+ Q
Sbjct: 627 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659

[Close]

BLAST of Cla97C08G147930 vs. Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 5.2e-83
Identity = 141/314 (44.90%), Postives = 215/314 (68.47%), Query Frame = 0


Query: 19  NGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVY 78
           NG   E L  F  + +   +  N  TLV+ LSACA++GAL+LG+W+H Y    G + N +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401

Query: 79  VGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITG 138
           V +ALI MYSKCG +E + EVF S++ +D+  W+++I GLA HG G +A+ +F++M+   
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461

Query: 139 EKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRA 198
            KP+G+TF  V C+C+H GLV+E  S F+ M  +Y I P+ +HY C+VD+ GR+G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521

Query: 199 IEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDL 258
           ++F+  MP+     +W A+LGAC+I+ N++LAE+A  +L++LEP+N   +V+LSNIY  L
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581

Query: 259 GRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLL 318
           G+W++V+ L+  MR TG KK PGCS IE++  + EF S D  H  S+++YG L  +M+ L
Sbjct: 582 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641

Query: 319 RSFGYEPNIVELQQ 333
           +S GYEP I ++ Q
Sbjct: 642 KSNGYEPEISQVLQ 655

[Close]

BLAST of Cla97C08G147930 vs. Swiss-Prot
Match: sp|Q9SIL5|PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 3.9e-78
Identity = 133/275 (48.36%), Postives = 201/275 (73.09%), Query Frame = 0


Query: 38  VVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAM 97
           + P++ +L++VL +CA+LG+L+LGKW+H+YA   GF     V NALI+MYSKCGVI  A+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296

Query: 98  EVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLG 157
           ++FG M+ KD+I+W+++I G A HG+   A+  F++M+    KP+GITF+G+L +C+H+G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356

Query: 158 LVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAV 217
           + +EG+ YF+ M  DY I P+IEHYGC++D+  RAG L+RA+E  + MPM+ D+ IW ++
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416

Query: 218 LGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSK 277
           L +CR   N+D+A +A+  L++LEP++  NYV+L+NIY DLG+W+DV+RL+ ++R+   K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476

Query: 278 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 313
           K PG SLIEVN+ V EF S D       EI  VL+
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511

[Close]

BLAST of Cla97C08G147930 vs. Swiss-Prot
Match: sp|Q9SZT8|PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.5e-77
Identity = 140/295 (47.46%), Postives = 200/295 (67.80%), Query Frame = 0


Query: 33  LIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGV 92
           L +G   P++ T+VA LSAC+++GAL+ G+W+HV+  +   + NV V   LIDMYSKCG 
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 93  IENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMK-ITGEKPDGITFIGVLC 152
           +E A+ VF     KD++ WN++I G A HG   DAL LF++M+ ITG +P  ITFIG L 
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369

Query: 153 SCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADA 212
           +C H GLV EGI  F SM  +Y I P+IEHYGC+V L GRAG L RA E ++ M M+AD+
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

Query: 213 VIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILM 272
           V+W++VLG+C+++ +  L +   + LI L  KN   YV+LSNIY  +G ++ VA+++ LM
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489

Query: 273 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPN 327
           ++ G  K PG S IE+ + V EF + D  HS+SKEIY +L+ + + ++S GY PN
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544

[Close]

BLAST of Cla97C08G147930 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.7e-76
Identity = 143/317 (45.11%), Postives = 195/317 (61.51%), Query Frame = 0


Query: 9   WNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYA 68
           WN +IGG+A N      L  FKRM   G +    ATL +VL AC  L  L+LG   HV+ 
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIA-EQATLTSVLRACTGLALLELGMQAHVH- 287

Query: 69  ATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADAL 128
             + +  ++ + NAL+DMY KCG +E+A+ VF  M  +D+ITW+++I GLA +G   +AL
Sbjct: 288 -IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 347

Query: 129 TLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDL 188
            LF +MK +G KP+ IT +GVL +C+H GL+E+G  YF SM   Y I P  EHYGCM+DL
Sbjct: 348 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDL 407

Query: 189 FGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANY 248
            G+AG LD A++ +  M  E DAV W  +LGACR+ +N+ LAE A +K+I L+P++   Y
Sbjct: 408 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTY 467

Query: 249 VMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIY 308
            +LSNIY +  +W  V  ++  MRD G KK PGCS IEVN  +  F   D  H Q  E+ 
Sbjct: 468 TLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVS 527

Query: 309 GVLKGLMKLLRSFGYEP 326
             L  L+  L   GY P
Sbjct: 528 KKLNQLIHRLTGIGYVP 541

[Close]

BLAST of Cla97C08G147930 vs. TAIR10
Match: AT1G13410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 378.6 bits (971), Expect = 3.9e-105
Identity = 176/292 (60.27%), Postives = 230/292 (78.77%), Query Frame = 0


Query: 24  EVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGF-KGNVYVGNA 83
           EVL  FKRM+ +G VVPNDAT+  VLSACA+LGA D GKWVH Y  T+G+ K +V V NA
Sbjct: 170 EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNA 229

Query: 84  LIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPD 143
           LIDMY KCG IE AMEVF  +  +DLI+WN++I GLA HG G +AL LFH+MK +G  PD
Sbjct: 230 LIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPD 289

Query: 144 GITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFV 203
            +TF+GVLC+C H+GLVE+G++YFNSM  D+SI P+IEH GC+VDL  RAG L +A+EF+
Sbjct: 290 KVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFI 349

Query: 204 RRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWK 263
            +MP++ADAVIWA +LGA ++YK +D+ E+AL++LI+LEP+NPAN+VMLSNIYGD GR+ 
Sbjct: 350 NKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFD 409

Query: 264 DVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGL 315
           D ARLK+ MRDTG KK  G S IE +D +V+FYS  E+H +++E+  +L+ L
Sbjct: 410 DAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461

[Close]

BLAST of Cla97C08G147930 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 320.9 bits (821), Expect = 9.6e-88
Identity = 150/334 (44.91%), Postives = 219/334 (65.57%), Query Frame = 0


Query: 1   MPERNVFSWNGLIGGYAHNGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDL 60
           +P ++V SWN LIGGY H   + E L  F+ ML  G   PND T++++L ACA LGA+D+
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG-ETPNDVTMLSILPACAHLGAIDI 386

Query: 61  GKWVHVY--AATIGFKGNVYVGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGL 120
           G+W+HVY      G      +  +LIDMY+KCG IE A +VF S+  K L +WN++I G 
Sbjct: 387 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 446

Query: 121 ATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQ 180
           A HG    +  LF +M+  G +PD ITF+G+L +C+H G+++ G   F +M  DY +TP+
Sbjct: 447 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 506

Query: 181 IEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLI 240
           +EHYGCM+DL G +GL   A E +  M ME D VIW ++L AC+++ N++L E   + LI
Sbjct: 507 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI 566

Query: 241 QLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLD 300
           ++EP+NP +YV+LSNIY   GRW +VA+ + L+ D G KK+PGCS IE++  V EF   D
Sbjct: 567 KIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGD 626

Query: 301 ERHSQSKEIYGVLKGLMKLLRSFGYEPNIVELQQ 333
           + H +++EIYG+L+ +  LL   G+ P+  E+ Q
Sbjct: 627 KFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ 659

[Close]

BLAST of Cla97C08G147930 vs. TAIR10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 309.3 bits (791), Expect = 2.9e-84
Identity = 141/314 (44.90%), Postives = 215/314 (68.47%), Query Frame = 0


Query: 19  NGHFFEVLRCFKRMLIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVY 78
           NG   E L  F  + +   +  N  TLV+ LSACA++GAL+LG+W+H Y    G + N +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401

Query: 79  VGNALIDMYSKCGVIENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITG 138
           V +ALI MYSKCG +E + EVF S++ +D+  W+++I GLA HG G +A+ +F++M+   
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461

Query: 139 EKPDGITFIGVLCSCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRA 198
            KP+G+TF  V C+C+H GLV+E  S F+ M  +Y I P+ +HY C+VD+ GR+G L++A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521

Query: 199 IEFVRRMPMEADAVIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDL 258
           ++F+  MP+     +W A+LGAC+I+ N++LAE+A  +L++LEP+N   +V+LSNIY  L
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581

Query: 259 GRWKDVARLKILMRDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLL 318
           G+W++V+ L+  MR TG KK PGCS IE++  + EF S D  H  S+++YG L  +M+ L
Sbjct: 582 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641

Query: 319 RSFGYEPNIVELQQ 333
           +S GYEP I ++ Q
Sbjct: 642 KSNGYEPEISQVLQ 655

[Close]

BLAST of Cla97C08G147930 vs. TAIR10
Match: AT2G20540.1 (mitochondrial editing factor 21)

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-79
Identity = 133/275 (48.36%), Postives = 201/275 (73.09%), Query Frame = 0


Query: 38  VVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGVIENAM 97
           + P++ +L++VL +CA+LG+L+LGKW+H+YA   GF     V NALI+MYSKCGVI  A+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296

Query: 98  EVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMKITGEKPDGITFIGVLCSCTHLG 157
           ++FG M+ KD+I+W+++I G A HG+   A+  F++M+    KP+GITF+G+L +C+H+G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356

Query: 158 LVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADAVIWAAV 217
           + +EG+ YF+ M  DY I P+IEHYGC++D+  RAG L+RA+E  + MPM+ D+ IW ++
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416

Query: 218 LGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILMRDTGSK 277
           L +CR   N+D+A +A+  L++LEP++  NYV+L+NIY DLG+W+DV+RL+ ++R+   K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476

Query: 278 KLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLK 313
           K PG SLIEVN+ V EF S D       EI  VL+
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511

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BLAST of Cla97C08G147930 vs. TAIR10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-78
Identity = 140/295 (47.46%), Postives = 200/295 (67.80%), Query Frame = 0


Query: 33  LIDGLVVPNDATLVAVLSACARLGALDLGKWVHVYAATIGFKGNVYVGNALIDMYSKCGV 92
           L +G   P++ T+VA LSAC+++GAL+ G+W+HV+  +   + NV V   LIDMYSKCG 
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGS 309

Query: 93  IENAMEVFGSMDLKDLITWNSVICGLATHGSGADALTLFHQMK-ITGEKPDGITFIGVLC 152
           +E A+ VF     KD++ WN++I G A HG   DAL LF++M+ ITG +P  ITFIG L 
Sbjct: 310 LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369

Query: 153 SCTHLGLVEEGISYFNSMVHDYSITPQIEHYGCMVDLFGRAGLLDRAIEFVRRMPMEADA 212
           +C H GLV EGI  F SM  +Y I P+IEHYGC+V L GRAG L RA E ++ M M+AD+
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

Query: 213 VIWAAVLGACRIYKNIDLAELALQKLIQLEPKNPANYVMLSNIYGDLGRWKDVARLKILM 272
           V+W++VLG+C+++ +  L +   + LI L  KN   YV+LSNIY  +G ++ VA+++ LM
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489

Query: 273 RDTGSKKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPN 327
           ++ G  K PG S IE+ + V EF + D  HS+SKEIY +L+ + + ++S GY PN
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPN 544

The following BLAST results are available for this feature:

BLAST of Cla97C08G147930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549948.1	1.3e-170	94.23	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur...	[more]
XP_022938516.1	8.2e-170	93.91	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur...	[more]
XP_022994015.1	1.4e-169	93.91	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur...	[more]
XP_011656468.1	7.0e-169	93.89	PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis s...	[more]
XP_016901901.1	4.5e-168	93.55	PREDICTED: pentatricopeptide repeat-containing protein At1g08070, chloroplastic-...	[more]

BLAST of Cla97C08G147930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBY4\|A0A0A0KBY4_CUCSA	4.6e-169	93.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017080 PE=4 SV=1	[more]
tr\|A0A1S4E0Z4\|A0A1S4E0Z4_CUCME	3.0e-168	93.55	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc...	[more]
tr\|A0A2C9VPV7\|A0A2C9VPV7_MANES	4.5e-140	75.72	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G067200 PE=4 SV=...	[more]
tr\|A0A061G8Y2\|A0A061G8Y2_THECC	2.2e-139	76.60	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=...	[more]
tr\|A0A251R6S1\|A0A251R6S1_PRUPE	1.4e-138	75.56	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G312300 PE=4 SV=1	[more]

BLAST of Cla97C08G147930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LN01\|PPR21_ARATH	1.7e-86	44.91	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
sp\|O82380\|PP175_ARATH	5.2e-83	44.90	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
sp\|Q9SIL5\|PP165_ARATH	3.9e-78	48.36	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SZT8\|PP354_ARATH	9.5e-77	47.46	Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t...	[more]
sp\|Q9SI53\|PP147_ARATH	4.7e-76	45.11	Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop...	[more]

BLAST of Cla97C08G147930 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13410.1	3.9e-105	60.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	9.6e-88	44.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G29760.1	2.9e-84	44.90	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	2.1e-79	48.36	mitochondrial editing factor 21	[more]
AT4G37380.1	5.3e-78	47.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G147930.1	Cla97C08G147930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 81..293 e-value: 3.9E-35 score: 123.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..71 e-value: 1.6E-10 score: 43.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 225..261 coord: 85..100
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 106..153 e-value: 5.4E-8 score: 32.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 7..41 e-value: 3.9E-6 score: 24.7 coord: 109..142 e-value: 9.9E-7 score: 26.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 181..206 e-value: 0.0091 score: 16.1 coord: 7..36 e-value: 3.6E-6 score: 26.8 coord: 81..104 e-value: 0.0021 score: 18.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 5..39 score: 10.194
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 142..177 score: 6.369
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 107..141 score: 10.687
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 41..75 score: 5.634
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 76..106 score: 7.903
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 178..208 score: 7.333
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 244..278 score: 6.774
None	No IPR available	PANTHER	PTHR24015:SF469	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 3..310
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 3..310

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G147930	Cla007971	Watermelon (97103) v1	wmwmbB102
Cla97C08G147930	ClCG08G005040	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G147930	CmaCh15G009110	Cucurbita maxima (Rimu)	cmawmbB321
Cla97C08G147930	CmoCh15G009490	Cucurbita moschata (Rifu)	cmowmbB304
Cla97C08G147930	Lsi08G003910	Bottle gourd (USVL1VR-Ls)	lsiwmbB445
Cla97C08G147930	Carg26882	Silver-seed gourd	carwmbB1001
Cla97C08G147930	Bhi04G001583	Wax gourd	wgowmbB332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C08G147930	Cucumber (Gy14) v2	cgybwmbB467
Cla97C08G147930	Cucumber (Gy14) v1	cgywmbB630
Cla97C08G147930	Cucurbita maxima (Rimu)	cmawmbB790
Cla97C08G147930	Cucurbita moschata (Rifu)	cmowmbB764
Cla97C08G147930	Wild cucumber (PI 183967)	cpiwmbB517
Cla97C08G147930	Cucumber (Chinese Long) v3	cucwmbB509
Cla97C08G147930	Cucumber (Chinese Long) v2	cuwmbB491
Cla97C08G147930	Melon (DHL92) v3.6.1	medwmbB297
Cla97C08G147930	Melon (DHL92) v3.5.1	mewmbB309