Cla97C07G136000 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G136000
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	scarecrow-like protein 15
Location	Cla97Chr07 : 22352186 .. 22352530 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAATTTGGTGGACAGTCTAGAGTTTTACGCACTGATGTTGGAGTCGTTGGACGCGGCGGGGGCCAGCTGTGAGTGGGTGCGGAGGATTGAAACGTTCGTGGTCCGGCCGAAGATATTGGCGGCGGTTGAAGGGGCTGGGAGAATGGCGGCGCCGCCGTGGAGGGAGGTATTCCACGGTGCCGGGATGAAACCGGTGGCGCTGAGCCAGTTTGCGGATTTCCAAGCGGAGTGCTTACTTGGCAAAATACAGGTTCGAGGGTTCCAAATAGGCAAACGACATGCTGAGCTGGTGCTGTGCTGGCATGAGAGGCCTCTCGTCGCCACGTCGGCTTGGAGGTGCTAA

mRNA sequence

AGGAATTTGGTGGACAGTCTAGAGTTTTACGCACTGATGTTGGAGTCGTTGGACGCGGCGGGGGCCAGCTGTGAGTGGGTGCGGAGGATTGAAACGTTCGTGGTCCGGCCGAAGATATTGGCGGCGGTTGAAGGGGCTGGGAGAATGGCGGCGCCGCCGTGGAGGGAGGTATTCCACGGTGCCGGGATGAAACCGGTGGCGCTGAGCCAGTTTGCGGATTTCCAAGCGGAGTGCTTACTTGGCAAAATACAGGTTCGAGGGTTCCAAATAGGCAAACGACATGCTGAGCTGGTGCTGTGCTGGCATGAGAGGCCTCTCGTCGCCACGTCGGCTTGGAGGTGCTAA

Coding sequence (CDS)

AGGAATTTGGTGGACAGTCTAGAGTTTTACGCACTGATGTTGGAGTCGTTGGACGCGGCGGGGGCCAGCTGTGAGTGGGTGCGGAGGATTGAAACGTTCGTGGTCCGGCCGAAGATATTGGCGGCGGTTGAAGGGGCTGGGAGAATGGCGGCGCCGCCGTGGAGGGAGGTATTCCACGGTGCCGGGATGAAACCGGTGGCGCTGAGCCAGTTTGCGGATTTCCAAGCGGAGTGCTTACTTGGCAAAATACAGGTTCGAGGGTTCCAAATAGGCAAACGACATGCTGAGCTGGTGCTGTGCTGGCATGAGAGGCCTCTCGTCGCCACGTCGGCTTGGAGGTGCTAA

Protein sequence

RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC

Homology

[Close]

BLAST of Cla97C07G136000 vs. NCBI nr
Match: XP_008453725.1 (PREDICTED: scarecrow-like protein 15 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-58
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG
Sbjct: 420 RNLMDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 479

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGMKPVALSQFADFQAECLLGK+QVRGFQIGKR+AELVLCWHERPLVATSAWRC
Sbjct: 480 AGMKPVALSQFADFQAECLLGKVQVRGFQIGKRNAELVLCWHERPLVATSAWRC 533

[Close]

BLAST of Cla97C07G136000 vs. NCBI nr
Match: KGN53268.1 (GRAS family transcription factor [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 4.2e-57
Identity = 110/114 (96.49%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYALMLESLDAAGAS EWVRRIETFVVRPKI+AAVEGAGRMAAPPWREVFHG
Sbjct: 419 RNLMDSLEFYALMLESLDAAGASGEWVRRIETFVVRPKIVAAVEGAGRMAAPPWREVFHG 478

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGMKPVALSQFADFQAECLLGKIQVRGFQIGKR+AELVLCWHERPLVATSAWRC
Sbjct: 479 AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRNAELVLCWHERPLVATSAWRC 532

[Close]

BLAST of Cla97C07G136000 vs. NCBI nr
Match: XP_004146542.2 (PREDICTED: scarecrow-like protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 229.9 bits (585), Expect = 4.2e-57
Identity = 110/114 (96.49%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYALMLESLDAAGAS EWVRRIETFVVRPKI+AAVEGAGRMAAPPWREVFHG
Sbjct: 394 RNLMDSLEFYALMLESLDAAGASGEWVRRIETFVVRPKIVAAVEGAGRMAAPPWREVFHG 453

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGMKPVALSQFADFQAECLLGKIQVRGFQIGKR+AELVLCWHERPLVATSAWRC
Sbjct: 454 AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRNAELVLCWHERPLVATSAWRC 507

[Close]

BLAST of Cla97C07G136000 vs. NCBI nr
Match: XP_023552315.1 (scarecrow-like protein 15 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 5.1e-55
Identity = 103/114 (90.35%), Postives = 109/114 (95.61%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYA+MLESLDAAGA  EWVRRIETFV+RPKILAAVEGAGRMA PPWREVFH 
Sbjct: 417 RNLLDSLEFYAMMLESLDAAGADGEWVRRIETFVLRPKILAAVEGAGRMAVPPWREVFHS 476

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
            GM+PVALSQFADFQAECLLGK+QVRGFQ+GKRHAELVLCWHERPLVATSAWRC
Sbjct: 477 VGMRPVALSQFADFQAECLLGKVQVRGFQVGKRHAELVLCWHERPLVATSAWRC 530

[Close]

BLAST of Cla97C07G136000 vs. NCBI nr
Match: XP_022942043.1 (scarecrow-like protein 15 [Cucurbita moschata])

HSP 1 Score: 222.6 bits (566), Expect = 6.7e-55
Identity = 104/114 (91.23%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNLVDSLEFYA+MLESLDAA A  +WVRRIETFV RPKILAAVEGAGRMAAPPWREVFHG
Sbjct: 422 RNLVDSLEFYAMMLESLDAAVAGGDWVRRIETFVFRPKILAAVEGAGRMAAPPWREVFHG 481

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGM+PVALSQFADFQAECLLGK+QV+GFQ+GKRHAELVLCWHERPLVATSAWRC
Sbjct: 482 AGMRPVALSQFADFQAECLLGKVQVQGFQVGKRHAELVLCWHERPLVATSAWRC 535

[Close]

BLAST of Cla97C07G136000 vs. TrEMBL
Match: tr|A0A1S3BWY3|A0A1S3BWY3_CUCME (scarecrow-like protein 15 OS=Cucumis melo OX=3656 GN=LOC103494368 PE=3 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.6e-59
Identity = 111/114 (97.37%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG
Sbjct: 420 RNLMDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 479

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGMKPVALSQFADFQAECLLGK+QVRGFQIGKR+AELVLCWHERPLVATSAWRC
Sbjct: 480 AGMKPVALSQFADFQAECLLGKVQVRGFQIGKRNAELVLCWHERPLVATSAWRC 533

[Close]

BLAST of Cla97C07G136000 vs. TrEMBL
Match: tr|A0A0A0KUN9|A0A0A0KUN9_CUCSA (GRAS family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G043840 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 110/114 (96.49%), Postives = 113/114 (99.12%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNL+DSLEFYALMLESLDAAGAS EWVRRIETFVVRPKI+AAVEGAGRMAAPPWREVFHG
Sbjct: 419 RNLMDSLEFYALMLESLDAAGASGEWVRRIETFVVRPKIVAAVEGAGRMAAPPWREVFHG 478

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           AGMKPVALSQFADFQAECLLGKIQVRGFQIGKR+AELVLCWHERPLVATSAWRC
Sbjct: 479 AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRNAELVLCWHERPLVATSAWRC 532

[Close]

BLAST of Cla97C07G136000 vs. TrEMBL
Match: tr|A0A1S3BXR2|A0A1S3BXR2_CUCME (scarecrow-like protein 15 OS=Cucumis melo OX=3656 GN=LOC103494369 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.3e-50
Identity = 96/113 (84.96%), Postives = 103/113 (91.15%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           +NLV +LEFYA MLESLDA G S EWVRRIETFV+RPKI A VEG G MAAPPWREVF G
Sbjct: 396 KNLVKNLEFYATMLESLDATGVSGEWVRRIETFVLRPKIFATVEGGGGMAAPPWREVFDG 455

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWR 114
           AGM+PVALSQFADFQAECLLGK+QVRGFQ+G+RHAELVLCWHERPLVATSAWR
Sbjct: 456 AGMRPVALSQFADFQAECLLGKVQVRGFQVGRRHAELVLCWHERPLVATSAWR 508

[Close]

BLAST of Cla97C07G136000 vs. TrEMBL
Match: tr|A0A0A0KXY2|A0A0A0KXY2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043830 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.2e-49
Identity = 94/113 (83.19%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWREVFHG 60
           RNLV +LEFYA MLESLDAAG S EWVRRIETF++RPKI A +EG G MAA  WREVF G
Sbjct: 393 RNLVKNLEFYATMLESLDAAGVSGEWVRRIETFILRPKIFAMIEGGGGMAATQWREVFEG 452

Query: 61  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWR 114
           AGM+PVALSQFADFQAECLLGK+QVRGFQ+G+RHAELVLCWHERPLVATSAWR
Sbjct: 453 AGMRPVALSQFADFQAECLLGKVQVRGFQVGRRHAELVLCWHERPLVATSAWR 505

[Close]

BLAST of Cla97C07G136000 vs. TrEMBL
Match: tr|A0A2P4KET3|A0A2P4KET3_QUESU (Scarecrow-like protein 15 OS=Quercus suber OX=58331 GN=CFP56_23764 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 8.7e-43
Identity = 87/118 (73.73%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAA----GASCEWVRRIETFVVRPKILAAVEGAGRMAAPPWRE 60
           RN V+SLEFYALMLESLDA+    G + +WVR+IE  ++RP+ILAAVE AGR AA PW++
Sbjct: 570 RNFVNSLEFYALMLESLDASVGGGGVAGDWVRKIEMVLLRPRILAAVEAAGRRAA-PWKD 629

Query: 61  VFHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           VF+GAGMKPV LSQFADFQAE LLGK+QVRGFQ+GKRHAELVLCW +RP+VATSAW+C
Sbjct: 630 VFYGAGMKPVQLSQFADFQAELLLGKVQVRGFQVGKRHAELVLCWRDRPMVATSAWKC 686

[Close]

BLAST of Cla97C07G136000 vs. Swiss-Prot
Match: sp|O23210|SCL15_ARATH (Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3)

HSP 1 Score: 139.0 bits (349), Expect = 3.2e-32
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRI-ETFVVRPKILAAVEGAG---RMAAPPWRE 60
           R  V +LEFY ++LESLDAA    + V++I E FV+RPKI AAVE A          WRE
Sbjct: 369 REFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMTWRE 428

Query: 61  VFHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWR 114
            F  AGM+P+ LSQFADFQAECLL K QVRGF + KR  ELVLCWH R LVATSAWR
Sbjct: 429 AFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 485

[Close]

BLAST of Cla97C07G136000 vs. Swiss-Prot
Match: sp|O81316|SCL6_ARATH (Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.0e-19
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPP---WREV 60
           + L  SL  +  + ESLDA  A+ + +++IE F+++P+I   V    R    P   W+ +
Sbjct: 439 QQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERPMMTWQAM 498

Query: 61  FHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           F   G  PV  S F + QAECL+ +  VRGF + K+H  L+LCW    LV  SAWRC
Sbjct: 499 FLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAWRC 555

[Close]

BLAST of Cla97C07G136000 vs. Swiss-Prot
Match: sp|Q7XJM8|SCL27_ARATH (Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 3   LVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRM--AAPPWREVFHG 62
           ++ SL+++  +LESLDA     +    IE F V+P I   +    R    +PPWR +F  
Sbjct: 529 VIHSLQYHTSLLESLDANQNQDD--SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQ 588

Query: 63  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
            G  P +LSQ A+ QAECLL +  VRGF + KR + LV+CW  + LV  SAW+C
Sbjct: 589 CGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640

[Close]

BLAST of Cla97C07G136000 vs. Swiss-Prot
Match: sp|Q9M000|SCL22_ARATH (Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.9e-17
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 3   LVDSLEFYALMLESLDAAGA-SCEWVRRIETFVVRPKILAAVEGAGRM--AAPPWREVFH 62
           ++++L++Y  +LESLD+    + E    IE F V+P I   +    R    +PPWR +F 
Sbjct: 506 VINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFG 565

Query: 63  GAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHA---ELVLCWHERPLVATSAWRC 115
             G  PV LSQ A+ QAE LL +  +RGF + KR +    LVLCW  + LV  SAW+C
Sbjct: 566 QCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623

[Close]

BLAST of Cla97C07G136000 vs. Swiss-Prot
Match: sp|Q6EI06|GAIP_CUCMA (DELLA protein GAIP OS=Cucurbita maxima OX=3661 GN=GAIP PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-07
Identity = 36/116 (31.03%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 5   DSLEFYALMLESLDAAGASCEWVRRIETFVVRPKI--LAAVEGAGRM----AAPPWREVF 64
           +SL +Y+ + +SL+ +  S +  + +    +  +I  + A EGA R+        WR   
Sbjct: 457 ESLHYYSTLFDSLECSPNSQD--KMMSEMYLGKQICNVVACEGADRVERHETLTQWRTRL 516

Query: 65  HGAGMKPVALSQFADFQAECLLGKI-QVRGFQIGKRHAELVLCWHERPLVATSAWR 114
             AG  P+ L   A  QA  LL       G+++ +    L+L WH RPL+ATSAW+
Sbjct: 517 SSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWK 570

[Close]

BLAST of Cla97C07G136000 vs. TAIR10
Match: AT4G36710.1 (GRAS family transcription factor)

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-33
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRI-ETFVVRPKILAAVEGAG---RMAAPPWRE 60
           R  V +LEFY ++LESLDAA    + V++I E FV+RPKI AAVE A          WRE
Sbjct: 369 REFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMTWRE 428

Query: 61  VFHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWR 114
            F  AGM+P+ LSQFADFQAECLL K QVRGF + KR  ELVLCWH R LVATSAWR
Sbjct: 429 AFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 485

[Close]

BLAST of Cla97C07G136000 vs. TAIR10
Match: AT4G00150.1 (GRAS family transcription factor)

HSP 1 Score: 94.4 bits (233), Expect = 5.0e-20
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 0


Query: 1   RNLVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRMAAPP---WREV 60
           + L  SL  +  + ESLDA  A+ + +++IE F+++P+I   V    R    P   W+ +
Sbjct: 439 QQLAHSLHSHTALFESLDAVNANLDAMQKIERFLIQPEIEKLVLDRSRPIERPMMTWQAM 498

Query: 61  FHGAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
           F   G  PV  S F + QAECL+ +  VRGF + K+H  L+LCW    LV  SAWRC
Sbjct: 499 FLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTELVGVSAWRC 555

[Close]

BLAST of Cla97C07G136000 vs. TAIR10
Match: AT2G45160.1 (GRAS family transcription factor)

HSP 1 Score: 92.0 bits (227), Expect = 2.5e-19
Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 3   LVDSLEFYALMLESLDAAGASCEWVRRIETFVVRPKILAAVEGAGRM--AAPPWREVFHG 62
           ++ SL+++  +LESLDA     +    IE F V+P I   +    R    +PPWR +F  
Sbjct: 529 VIHSLQYHTSLLESLDANQNQDD--SSIERFWVQPSIEKLLMKRHRWIERSPPWRILFTQ 588

Query: 63  AGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHAELVLCWHERPLVATSAWRC 115
            G  P +LSQ A+ QAECLL +  VRGF + KR + LV+CW  + LV  SAW+C
Sbjct: 589 CGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWKC 640

[Close]

BLAST of Cla97C07G136000 vs. TAIR10
Match: AT3G60630.1 (GRAS family transcription factor)

HSP 1 Score: 88.6 bits (218), Expect = 2.7e-18
Identity = 48/118 (40.68%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 3   LVDSLEFYALMLESLDAAGA-SCEWVRRIETFVVRPKILAAVEGAGRM--AAPPWREVFH 62
           ++++L++Y  +LESLD+    + E    IE F V+P I   +    R    +PPWR +F 
Sbjct: 506 VINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNRYRWMERSPPWRSLFG 565

Query: 63  GAGMKPVALSQFADFQAECLLGKIQVRGFQIGKRHA---ELVLCWHERPLVATSAWRC 115
             G  PV LSQ A+ QAE LL +  +RGF + KR +    LVLCW  + LV  SAW+C
Sbjct: 566 QCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWKC 623

[Close]

BLAST of Cla97C07G136000 vs. TAIR10
Match: AT1G66350.1 (RGA-like 1)

HSP 1 Score: 53.5 bits (127), Expect = 9.7e-08
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 0


Query: 5   DSLEFYALMLESLDAAGASCEWVRRIETFVVRPKI-LAAVEGAGRM----AAPPWREVFH 64
           +SL +Y+ + +SL+  G   +     E F+ R  + L A EG  R+        WR  F 
Sbjct: 394 ESLHYYSSLFDSLE--GPPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFG 453

Query: 65  GAGMKPVALSQFADFQAECLLGKIQ-VRGFQIGKRHAELVLCWHERPLVATSAWR 114
             G KPV++   A  QA  LL       G+ + +    L+L W  RPL+ATSAWR
Sbjct: 454 LGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506

The following BLAST results are available for this feature:

BLAST of Cla97C07G136000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453725.1	1.0e-58	97.37	PREDICTED: scarecrow-like protein 15 [Cucumis melo]	[more]
KGN53268.1	4.2e-57	96.49	GRAS family transcription factor [Cucumis sativus]	[more]
XP_004146542.2	4.2e-57	96.49	PREDICTED: scarecrow-like protein 15 isoform X2 [Cucumis sativus]	[more]
XP_023552315.1	5.1e-55	90.35	scarecrow-like protein 15 [Cucurbita pepo subsp. pepo]	[more]
XP_022942043.1	6.7e-55	91.23	scarecrow-like protein 15 [Cucurbita moschata]	[more]

BLAST of Cla97C07G136000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWY3\|A0A1S3BWY3_CUCME	6.6e-59	97.37	scarecrow-like protein 15 OS=Cucumis melo OX=3656 GN=LOC103494368 PE=3 SV=1	[more]
tr\|A0A0A0KUN9\|A0A0A0KUN9_CUCSA	2.8e-57	96.49	GRAS family transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G043840 PE=3...	[more]
tr\|A0A1S3BXR2\|A0A1S3BXR2_CUCME	3.3e-50	84.96	scarecrow-like protein 15 OS=Cucumis melo OX=3656 GN=LOC103494369 PE=3 SV=1	[more]
tr\|A0A0A0KXY2\|A0A0A0KXY2_CUCSA	6.2e-49	83.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043830 PE=3 SV=1	[more]
tr\|A0A2P4KET3\|A0A2P4KET3_QUESU	8.7e-43	73.73	Scarecrow-like protein 15 OS=Quercus suber OX=58331 GN=CFP56_23764 PE=3 SV=1	[more]

BLAST of Cla97C07G136000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23210\|SCL15_ARATH	3.2e-32	61.54	Scarecrow-like protein 15 OS=Arabidopsis thaliana OX=3702 GN=SCL15 PE=1 SV=3	[more]
sp\|O81316\|SCL6_ARATH	9.0e-19	39.32	Scarecrow-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SCL6 PE=1 SV=1	[more]
sp\|Q7XJM8\|SCL27_ARATH	4.5e-18	42.11	Scarecrow-like protein 27 OS=Arabidopsis thaliana OX=3702 GN=SCL27 PE=2 SV=1	[more]
sp\|Q9M000\|SCL22_ARATH	4.9e-17	40.68	Scarecrow-like protein 22 OS=Arabidopsis thaliana OX=3702 GN=SCL22 PE=2 SV=1	[more]
sp\|Q6EI06\|GAIP_CUCMA	1.6e-07	31.03	DELLA protein GAIP OS=Cucurbita maxima OX=3661 GN=GAIP PE=2 SV=1	[more]

BLAST of Cla97C07G136000 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36710.1	1.8e-33	61.54	GRAS family transcription factor	[more]
AT4G00150.1	5.0e-20	39.32	GRAS family transcription factor	[more]
AT2G45160.1	2.5e-19	42.11	GRAS family transcription factor	[more]
AT3G60630.1	2.7e-18	40.68	GRAS family transcription factor	[more]
AT1G66350.1	9.7e-08	33.91	RGA-like 1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0048831	regulation of shoot system development
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G136000.1	Cla97C07G136000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 2..113 e-value: 2.0E-25 score: 89.4
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 1..113 score: 19.354
None	No IPR available	PANTHER	PTHR31636:SF53	SCARECROW-LIKE PROTEIN 15	coord: 1..113
None	No IPR available	PANTHER	PTHR31636	FAMILY NOT NAMED	coord: 1..113

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G136000	Cla014540	Watermelon (97103) v1	wmwmbB166
Cla97C07G136000	Csa4G043830	Cucumber (Chinese Long) v2	cuwmbB322
Cla97C07G136000	ClCG07G008970	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G136000	CSPI04G05090	Wild cucumber (PI 183967)	cpiwmbB332
Cla97C07G136000	Cucsa.201250	Cucumber (Gy14) v1	cgywmbB376
Cla97C07G136000	CmaCh04G007740	Cucurbita maxima (Rimu)	cmawmbB774
Cla97C07G136000	CmaCh16G006490	Cucurbita maxima (Rimu)	cmawmbB351
Cla97C07G136000	CmoCh04G008290	Cucurbita moschata (Rifu)	cmowmbB748
Cla97C07G136000	CmoCh16G007060	Cucurbita moschata (Rifu)	cmowmbB336
Cla97C07G136000	Lsi07G002180	Bottle gourd (USVL1VR-Ls)	lsiwmbB412
Cla97C07G136000	CsGy4G004980	Cucumber (Gy14) v2	cgybwmbB305
Cla97C07G136000	Carg14173	Silver-seed gourd	carwmbB0989
Cla97C07G136000	Carg05767	Silver-seed gourd	carwmbB1084
Cla97C07G136000	CsaV3_4G005220	Cucumber (Chinese Long) v3	cucwmbB330

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G136000	Watermelon (97103) v2	wmbwmbB037
Cla97C07G136000	Melon (DHL92) v3.6.1	medwmbB482
Cla97C07G136000	Melon (DHL92) v3.5.1	mewmbB490
Cla97C07G136000	Watermelon (97103) v1	wmwmbB279
Cla97C07G136000	Wax gourd	wgowmbB207