Cla97C07G134780 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G134780
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	F-box protein
Location	Cla97Chr07 : 17651779 .. 17652528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATGGGAAGAAGTTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCGCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAGATGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACAGATACCTACTACAAACTATATCGAAATTTTTACAAACGCCCCAATAATCGGTGTCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAAACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAAGCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTCGAAGTCCCTGAGTTCAAAATGACACTCCCTGTTGAGCCAAGGTTTTCAATTCCTATATCCCATAGCGTGAGCGTATCTGTGCTTGTGAGACGAAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATAGAACGTCATACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTCTCGGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTCTGGACTTGCTTGATTGGAAATGA

mRNA sequence

ATGACATGGGAAGAAGTTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCGCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAGATGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACAGATACCTACTACAAACTATATCGAAATTTTTACAAACGCCCCAATAATCGGTGTCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAAACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAAGCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTCGAAGTCCCTGAGTTCAAAATGACACTCCCTGTTGAGCCAAGGTTTTCAATTCCTATATCCCATAGCGTGAGCGTATCTGTGCTTGTGAGACGAAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATAGAACGTCATACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTCTCGGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTCTGGACTTGCTTGATTGGAAATGA

Coding sequence (CDS)

ATGACATGGGAAGAAGTTTTGAAGGTGATTTTCCCTTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATTGCGCGAGATGATTACTTCTGGAAATGCTTGTGTGCCAAGAGATGGCCTTCAACCTGCAAAACGCCCAATCCTCCAACAGATACCTACTACAAACTATATCGAAATTTTTACAAACGCCCCAATAATCGGTGTCTTCTCCCTCCTCGACTTTCCTTTGATGATTTAGAGTTTTTTATCGACATTTGGAGTGAAAACAGATTAATCTTCTCAGAAGTGGTTTCAGGTCAAGTCCTCCAGAATGGTATGAAGAAGCCACCACCTGGTACTAGTAATGTGCTTAGTTATCACCTCGAAGTCCCTGAGTTCAAAATGACACTCCCTGTTGAGCCAAGGTTTTCAATTCCTATATCCCATAGCGTGAGCGTATCTGTGCTTGTGAGACGAAAGGATTCCAATAAAGTTGCTCGGATAGTCAATAAATCTCTATTTGATTATATTGATAGAACGTCATACAGGGCATTGGCATTTGACTACCTTGATTTTTCACCTCTCCACCCGTTTGTCTCGGGAATCCGAGCATGGATCTCATTGCTTTTCATGGACGATGGAAATGATGGTGTAATTGATGTATTTGGAATAGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTCTGGACTTGCTTGATTGGAAATGA

Protein sequence

MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDTYYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPGTSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDRTSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVLWLLDLLDWK

Homology

[Close]

BLAST of Cla97C07G134780 vs. NCBI nr
Match: XP_008448789.1 (PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-box protein At5g39250 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 6.8e-137
Identity = 234/249 (93.98%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLYRNFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSE VSG++LQNGMK PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           TSNVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. NCBI nr
Match: XP_004147232.1 (PREDICTED: F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical protein Csa_3G017250 [Cucumis sativus])

HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLYRNFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSEVVSG + QNGMK PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           T N+LSYHLEVPEFKMTL VEPRFSIPIS++VS SVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. NCBI nr
Match: XP_023005069.1 (F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At5g39250-like [Cucurbita maxima] >XP_023005071.1 F-box protein At5g39250-like [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132
Identity = 225/249 (90.36%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M WEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAK+WPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSEVV+GQVLQ+GM KPPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGM-KPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of Cla97C07G134780 vs. NCBI nr
Match: XP_022959961.1 (F-box protein At5g39250 [Cucurbita moschata] >XP_022959962.1 F-box protein At5g39250 [Cucurbita moschata] >XP_022959963.1 F-box protein At5g39250 [Cucurbita moschata])

HSP 1 Score: 479.6 bits (1233), Expect = 6.6e-132
Identity = 224/249 (89.96%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M WEE+LKVIFPLLEGVDLASCM VCKQWRDIARDD+FWKCLCAK+WPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMLVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSEVV+GQVLQ+GM KPPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGM-KPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of Cla97C07G134780 vs. NCBI nr
Match: XP_023513418.1 (F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513419.1 F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513420.1 F-box protein At5g39250-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476.5 bits (1225), Expect = 5.6e-131
Identity = 223/249 (89.56%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M WEE+LKVIFPLLEGVDLASCM VCKQWRDIARDD+FWKCLCAK+WPSTCK P+PPT+T
Sbjct: 1   MRWEEILKVIFPLLEGVDLASCMLVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLY+NFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSEVV+GQVLQ+GM KPPPG
Sbjct: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGM-KPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPISH+VSVSVLV RKDSNKVA IVNKS+FDYIDR
Sbjct: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVACIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG+IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 248

[Close]

BLAST of Cla97C07G134780 vs. TrEMBL
Match: tr|A0A1S3BL55|A0A1S3BL55_CUCME (F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 4.5e-137
Identity = 234/249 (93.98%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLYRNFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSE VSG++LQNGMK PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           TSNVLSYHLEVPEFKMTLPVEPRFSIPIS++VS SVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. TrEMBL
Match: tr|A0A0A0L6S1|A0A0A0L6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 1.2e-132
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           MTWEE+LKVIFPLLEGVDLASCMAVCKQWRDIA+DDYFWKCLCAK+WPSTCKT +PPTDT
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLYRNFYKRPNNR LLPPRLSFDDLEFFIDIWSE+RLIFSEVVSG + QNGMK PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
           T N+LSYHLEVPEFKMTL VEPRFSIPIS++VS SVLV RKDSNKVARIVNKS+FDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           TSYRALAFDYLDFSP HPFVSGIRAWISLLFMDDG+DG IDVFGIVMDFCDAANTKDEVL
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEVL 240

Query: 241 WLLDLLDWK 250
           WLLDLLDWK
Sbjct: 241 WLLDLLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. TrEMBL
Match: tr|A0A2P4LM64|A0A2P4LM64_QUESU (F-box protein OS=Quercus suber OX=58331 GN=CFP56_44682 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.1e-117
Identity = 201/249 (80.72%), Postives = 223/249 (89.56%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M +EEVLK +FPLL+GVDLASCMAV KQWRDIARDDYFWKC+CAKRWPS CK PNPPT T
Sbjct: 4   MDYEEVLKAVFPLLDGVDLASCMAVSKQWRDIARDDYFWKCVCAKRWPSICKRPNPPTLT 63

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           +YKLY+ FYKR N R LLPPRLSFDDLEFFIDIW+E RLIFSEVV G VLQ G+K PPPG
Sbjct: 64  FYKLYQTFYKRQNRRTLLPPRLSFDDLEFFIDIWTEGRLIFSEVVPGPVLQAGIKIPPPG 123

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
             ++L +HLE PE+KMTLPVEPRF++PI   VSVSVLV RKDSN+VA I+NKSLFDYIDR
Sbjct: 124 ICDMLRFHLEGPEYKMTLPVEPRFTVPICQPVSVSVLVGRKDSNRVACIINKSLFDYIDR 183

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           T+YRALAFDYLDFSP +PF+SGIRAWISLLFMDDGNDGVIDVFG+ MDFCDAAN+KDEVL
Sbjct: 184 TAYRALAFDYLDFSPDYPFISGIRAWISLLFMDDGNDGVIDVFGVEMDFCDAANSKDEVL 243

Query: 241 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

[Close]

BLAST of Cla97C07G134780 vs. TrEMBL
Match: tr|A0A1R3ITJ7|A0A1R3ITJ7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21402 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.9e-114
Identity = 193/249 (77.51%), Postives = 224/249 (89.96%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M+ EEVLK++FP+L+G DLA+CM VCKQWRDIARDDYFWKC+CAK+WPS CK PNPPT T
Sbjct: 1   MSCEEVLKLVFPILDGTDLAACMVVCKQWRDIARDDYFWKCVCAKKWPSICKRPNPPTVT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLY+ FYKR + R LLPPRLSFDDLEFFIDIW+E++LIFSEVV G VLQ G+K PP G
Sbjct: 61  YYKLYQTFYKRQHQRTLLPPRLSFDDLEFFIDIWAEDKLIFSEVVPGPVLQTGIKIPPTG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
            S++L +HLE PE+KM LPVEPRF++P S ++SVSVLV RKDSNKVA I+NKSLFDYIDR
Sbjct: 121 ISDMLKFHLEGPEYKMILPVEPRFTVPWSQTMSVSVLVGRKDSNKVACIINKSLFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           ++YRALAFDYLDFSP +PF+SGIRAWISLLFMDDGNDGV+DVFGI MDFCDAAN+K+EVL
Sbjct: 181 SAYRALAFDYLDFSPNYPFISGIRAWISLLFMDDGNDGVMDVFGIEMDFCDAANSKEEVL 240

Query: 241 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 241 WLLDMLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. TrEMBL
Match: tr|A0A1R3HSV7|A0A1R3HSV7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17365 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.7e-112
Identity = 191/249 (76.71%), Postives = 222/249 (89.16%), Query Frame = 0


Query: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDT 60
           M+ EEVLK++FP+L+G DLA+CM V KQWRDIARDDY WKC+CAK+WPS CK PNPPT T
Sbjct: 1   MSCEEVLKLVFPILDGTDLAACMVVSKQWRDIARDDYLWKCVCAKKWPSICKRPNPPTVT 60

Query: 61  YYKLYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPG 120
           YYKLY+ FYKR + R LLPPRLSFDDLEFFIDIW+E++LIFSEVV G VLQ G+K PP G
Sbjct: 61  YYKLYQTFYKRQHQRTLLPPRLSFDDLEFFIDIWAEDKLIFSEVVPGPVLQTGIKIPPTG 120

Query: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDR 180
            S++L +HLE PE++M LPVEPRF++P S +VSVSVLV RKDSNKVA I+NKSLFDYIDR
Sbjct: 121 ISDMLKFHLEGPEYQMILPVEPRFTVPWSQTVSVSVLVGRKDSNKVACIINKSLFDYIDR 180

Query: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGVIDVFGIVMDFCDAANTKDEVL 240
           ++YRALAFDYLDFSP +PF+SGIRAWISLLFMDDGNDGV+DVFGI MDFCDAAN+K+EVL
Sbjct: 181 SAYRALAFDYLDFSPNYPFISGIRAWISLLFMDDGNDGVMDVFGIEMDFCDAANSKEEVL 240

Query: 241 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 241 WLLDMLDWK 249

[Close]

BLAST of Cla97C07G134780 vs. Swiss-Prot
Match: sp|Q9FL82|FB270_ARATH (F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.7e-100
Identity = 171/249 (68.67%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 4   EEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDTYYK 63
           EEVLK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAK+WPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPGTSN 123
           +Y+ F KR  NR L PPRLSF++LEFFIDIWSE RL+FS ++ G  L+NG++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDRTSY 183
           VL  HL  P++KM +P EPRF+IP++ SVSVSVLV R DS+KVARI+N+S+FDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGVIDVFGIVMDFCDAANTKDEVL 243
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG++DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 244 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

[Close]

BLAST of Cla97C07G134780 vs. TAIR10
Match: AT5G39250.1 (F-box family protein)

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 171/249 (68.67%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 4   EEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKRWPSTCKTPNPPTDTYYK 63
           EEVLK +FPLLEG DLASCM VCKQWRDIARDD++WKC CAK+WPS CK   PPT+TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYRNFYKRPNNRCLLPPRLSFDDLEFFIDIWSENRLIFSEVVSGQVLQNGMKKPPPGTSN 123
           +Y+ F KR  NR L PPRLSF++LEFFIDIWSE RL+FS ++ G  L+NG++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VLSYHLEVPEFKMTLPVEPRFSIPISHSVSVSVLVRRKDSNKVARIVNKSLFDYIDRTSY 183
           VL  HL  P++KM +P EPRF+IP++ SVSVSVLV R DS+KVARI+N+S+FDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RALAFDYLDFSPLHPFVSGIRAWISLLFM---DDGNDGVIDVFGIVMDFCDAANTKDEVL 243
           RALAF+YLD SP +PF+SGIRAWISLLFM   D  +DG++DVFGI +DF D A+TK+EVL
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEVL 243

Query: 244 WLLDLLDWK 250
           WLLD+LDWK
Sbjct: 244 WLLDMLDWK 252

The following BLAST results are available for this feature:

BLAST of Cla97C07G134780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448789.1	6.8e-137	93.98	PREDICTED: F-box protein At5g39250 [Cucumis melo] >XP_008448790.1 PREDICTED: F-b...	[more]
XP_004147232.1	1.7e-132	90.76	PREDICTED: F-box protein At5g39250 [Cucumis sativus] >KGN55831.1 hypothetical pr...	[more]
XP_023005069.1	1.7e-132	90.36	F-box protein At5g39250-like [Cucurbita maxima] >XP_023005070.1 F-box protein At...	[more]
XP_022959961.1	6.6e-132	89.96	F-box protein At5g39250 [Cucurbita moschata] >XP_022959962.1 F-box protein At5g3...	[more]
XP_023513418.1	5.6e-131	89.56	F-box protein At5g39250-like [Cucurbita pepo subsp. pepo] >XP_023513419.1 F-box ...	[more]

BLAST of Cla97C07G134780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BL55\|A0A1S3BL55_CUCME	4.5e-137	93.98	F-box protein At5g39250 OS=Cucumis melo OX=3656 GN=LOC103490854 PE=4 SV=1	[more]
tr\|A0A0A0L6S1\|A0A0A0L6S1_CUCSA	1.2e-132	90.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017250 PE=4 SV=1	[more]
tr\|A0A2P4LM64\|A0A2P4LM64_QUESU	3.1e-117	80.72	F-box protein OS=Quercus suber OX=58331 GN=CFP56_44682 PE=4 SV=1	[more]
tr\|A0A1R3ITJ7\|A0A1R3ITJ7_9ROSI	1.9e-114	77.51	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_21402 PE=4 SV=1	[more]
tr\|A0A1R3HSV7\|A0A1R3HSV7_COCAP	1.7e-112	76.71	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17365 PE=4 ...	[more]

BLAST of Cla97C07G134780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FL82\|FB270_ARATH	2.7e-100	68.67	F-box protein At5g39250 OS=Arabidopsis thaliana OX=3702 GN=At5g39250 PE=2 SV=1	[more]

BLAST of Cla97C07G134780 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G39250.1	1.5e-101	68.67	F-box family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G134780.1	Cla97C07G134780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 5..43 e-value: 3.3E-10 score: 39.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..42 score: 8.862
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 3..74 e-value: 5.2E-11 score: 44.3
None	No IPR available	PANTHER	PTHR20995:SF25	F-BOX ONLY PROTEIN 15	coord: 4..183
None	No IPR available	PANTHER	PTHR20995	FAMILY NOT NAMED	coord: 4..183
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 5..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G134780	ClCG07G007400	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G134780	Lsi07G010060	Bottle gourd (USVL1VR-Ls)	lsiwmbB416
Cla97C07G134780	Bhi01G001649	Wax gourd	wgowmbB218

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G134780	Silver-seed gourd	carwmbB0732
Cla97C07G134780	Cucurbita maxima (Rimu)	cmawmbB498
Cla97C07G134780	Cucurbita maxima (Rimu)	cmawmbB780
Cla97C07G134780	Cucurbita moschata (Rifu)	cmowmbB480
Cla97C07G134780	Watermelon (97103) v1	wmwmbB178
Cla97C07G134780	Watermelon (97103) v1	wmwmbB166
Cla97C07G134780	Watermelon (97103) v1	wmwmbB171