Cla97C07G131430 (gene) Watermelon (97103) v2

Overview
NameCla97C07G131430
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Description60S ribosomal protein L23a
LocationCla97Chr07 : 2962726 .. 2963888 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCTAAAGGTATGCTCGCATTCTGATATTGTGTTTGTTTCAGCACTAGATGTTCGTTTATTTCAATTTCTGCCTCCGTTTGTTTCAAAAGAAGCTTGGTACCGTAATACGTTCCCAGTATTTGAAGCCTAGTTTCTTAAATCTACTTCTGCTCTGAACTACAAAACCAAGTGCTTGTTGGATGGGATTTTAGTATGATATGGAAGGAGAAGAGTAGTTGATTAAAGCGAATTCTATGTAGGTTTTGCAATTAATTTAGCGTTTTAGATGGAAGAACAACATTTTGAGAAGGTTTAGAGCACTTTTTATATGTGTGAATTGTATTGAATTCATTGGTGGAATCTGAGCTTCTAAACTGCGCTGGGTAGTTTTAAGCTTTTGATTCTGAAGGTTTTTTGTTTTCGTCTTTTGCAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAACACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAATATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGTATGCATGGTTCATAAGTTTTGATGAACAGCAATTTAGATTCTACATTTGCTAATTCAGTATTAATCATCTTTTAGAAAGAAACTTGGTATGATACAAAAGAAACAATAGTTCAGGTCATGCTTTCGAACACTGCAGATAAAAATACCTCAACTATAATTTTATTGTTTGGGCCTGATTTTGCTTATTATCTTACTCAACACCTTTAATCTATGTACAAACTATCTATTGATTAATCCATTGTGATGATGAATGATTGATGTTCTAATGTATTTTCCTACATTCCTGGTATGCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGGTATCATCTAA

mRNA sequence

ATGGCACCTAAAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAACACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAATATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGGTATCATCTAA

Coding sequence (CDS)

ATGGCACCTAAAGCCGACAGTAGCAAAAAGGCTGATCCCAAGGCTCAAGCCTTGAAGACTGCCAAGGCAGTCAAGTCTGGTCCAACTTTCAAGAAGAAGGCTAAGAAGATTAGAACATCAGTCACATTCCATAGGCCAAAGACATTGAAGAAGGATAGAAATCCCAAGTATCCCAGAATCAGTGCAACTCCAAGGAATAAGTTGGACCAGTATCAAATTCTGAAATATCCACTGACCACAGAGTCTGCAATGAAGAAGATTGAGGATAATAACACCCTTGTCTTTATTGTTGACATTCGTGCCAACAAGAAAAATATTAAAGATGCTGTTAAGAAGATGTATGATATCCAGACCAAGAAAGTGAACACTTTAATCAGGCCCGACGGAACGAAGAAGGCATACGTTAGGTTAACTCCAGATTATGATGCCCTAGATGTGGCAAACAAGATTGGTATCATCTAA

Protein sequence

MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Homology
[Close]
BLAST of Cla97C07G131430 vs. NCBI nr
Match: XP_004147702.1 (PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus] >XP_008461635.1 PREDICTED: 60S ribosomal protein L23a [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 2.3e-74
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           S TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK
Sbjct: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. NCBI nr
Match: XP_022139271.1 (60S ribosomal protein L23a [Momordica charantia])

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72
Identity = 149/153 (97.39%), Postives = 151/153 (98.69%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLK DRNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKXDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IK+AVKKMYDIQTKK
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKNAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. NCBI nr
Match: XP_022134285.1 (60S ribosomal protein L23A [Momordica charantia])

HSP 1 Score: 277.3 bits (708), Expect = 3.1e-71
Identity = 147/153 (96.08%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADS+KKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKK+RNPKYPRI
Sbjct: 1   MAPKADSTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SATPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IK AVKKMYDIQTKK
Sbjct: 61  SATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. NCBI nr
Match: XP_015867602.1 (60S ribosomal protein L23A [Ziziphus jujuba] >XP_015867603.1 60S ribosomal protein L23A [Ziziphus jujuba])

HSP 1 Score: 272.7 bits (696), Expect = 7.6e-70
Identity = 144/153 (94.12%), Postives = 147/153 (96.08%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKAD SKKADPKAQALKTAKAVKSGP FKKKAKKIRTSVTFHRP+TLKKDRNPKYPRI
Sbjct: 1   MAPKADGSKKADPKAQALKTAKAVKSGPLFKKKAKKIRTSVTFHRPRTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           S TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IK+AVKKMYDIQ KK
Sbjct: 61  SVTPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKNAVKKMYDIQAKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. NCBI nr
Match: XP_010096658.1 (60S ribosomal protein L23a [Morus notabilis] >EXB65326.1 60S ribosomal protein L23A [Morus notabilis])

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69
Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKAD++KK+DPKAQA KTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKK+RNPKYPRI
Sbjct: 1   MAPKADNTKKSDPKAQASKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SA PR+KLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IKDAVKKMYDIQTKK
Sbjct: 61  SAPPRHKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. TrEMBL
Match: tr|A0A1S3CFM9|A0A1S3CFM9_CUCME (60S ribosomal protein L23a OS=Cucumis melo OX=3656 GN=LOC103500191 PE=3 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           S TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK
Sbjct: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. TrEMBL
Match: tr|W9R299|W9R299_9ROSA (60S ribosomal protein L23A OS=Morus notabilis OX=981085 GN=L484_025406 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKAD++KK+DPKAQA KTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKK+RNPKYPRI
Sbjct: 1   MAPKADNTKKSDPKAQASKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SA PR+KLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IKDAVKKMYDIQTKK
Sbjct: 61  SAPPRHKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. TrEMBL
Match: tr|I1MDJ2|I1MDJ2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100785534 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69
Identity = 144/153 (94.12%), Postives = 146/153 (95.42%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPKADS KKADPKAQALKTAKAVKSG T KKK KKIRTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKADSLKKADPKAQALKTAKAVKSGATLKKKTKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVD+RA+KK IKDAVKKMYDIQTKK
Sbjct: 61  SAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. TrEMBL
Match: tr|M5X1F0|M5X1F0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G228900 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69
Identity = 144/154 (93.51%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           MAP KAD++KK+DPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRP+TLKK+RNPKYPR
Sbjct: 1   MAPAKADNTKKSDPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPRTLKKERNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTK 120
           ISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IKDAVKKMYDIQTK
Sbjct: 61  ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cla97C07G131430 vs. TrEMBL
Match: tr|A0A2H5NYT5|A0A2H5NYT5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088340 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.2e-69
Identity = 142/153 (92.81%), Postives = 146/153 (95.42%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60
           MAPK DSSKK DPKAQA K AKAVKSGPTFKKKAKK+RTSVTFHRPKTLKKDRNPKYPRI
Sbjct: 1   MAPKVDSSKKGDPKAQATKVAKAVKSGPTFKKKAKKMRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKK 120
           SA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+K+ IKDAVKKMY+IQTKK
Sbjct: 61  SAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKRKIKDAVKKMYEIQTKK 120

Query: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 VNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153

[Close]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match: sp|Q9AT35|RL23A_DAUCA (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-67
Identity = 140/154 (90.91%), Postives = 144/154 (93.51%), Query Frame = 0 

Query: 1   MAP-KADSSKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           M+P K D +KK+D KAQALKTAKAVKSG T  KK KKIRTSVTFHRP+TL KDRNPKYPR
Sbjct: 1   MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTK 120
           ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKK IKDAVKKMYDIQTK
Sbjct: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

[Close]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match: sp|O22644|RL23A_FRIAG (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.7e-65
Identity = 137/154 (88.96%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MAPKADSSKKADPKAQALKTAKAVKSG-PTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60
           MAP A  +KK D KAQALK AKAVKSG  T +KKAKKIRTSVTFHRPKTLKKDRNPKYPR
Sbjct: 1   MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60

Query: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTK 120
           ISA PRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IK AVKKMYDIQTK
Sbjct: 61  ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTK 120

Query: 121 KVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           KVNTLIRPDGTKKAYVRLTPDYDALD+ANKIGII
Sbjct: 121 KVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154

[Close]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match: sp|Q9M3C3|R23A2_ARATH (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.6e-55
Identity = 112/122 (91.80%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 32  KKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNN 91
           K AKKIRT VTFHRPKTL   R PKYP+ISATPRNKLD YQILKYPLTTESAMKKIEDNN
Sbjct: 33  KPAKKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNN 92

Query: 92  TLVFIVDIRANKKNIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 151
           TLVFIVDIRA+KK IKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG
Sbjct: 93  TLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 152

Query: 152 II 154
           II
Sbjct: 153 II 154

[Close]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match: sp|Q24JY1|RL23A_BOVIN (60S ribosomal protein L23a OS=Bos taurus OX=9913 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44
Identity = 107/157 (68.15%), Postives = 113/157 (71.97%), Query Frame = 0 

Query: 1   MAPKADSSKKA----DPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPK 60
           MAPKA     A              KAV  G    KK KKIRTS TF RPKTL+  R PK
Sbjct: 1   MAPKAKKEAPAXXXXXXXXXXXXAKKAVLKGVHSHKK-KKIRTSPTFRRPKTLRLRRQPK 60

Query: 61  YPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDI 120
           YPR SA  RNKLD Y I+K+PLTTESAMKKIEDNNTLVFIVD++ANK  IK AVKK+YDI
Sbjct: 61  YPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDI 120

Query: 121 QTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
              KVNTLIRPDG KKAYVRL PDYDALDVANKIGII
Sbjct: 121 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156

[Close]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match: sp|P62750|RL23A_HUMAN (60S ribosomal protein L23a OS=Homo sapiens OX=9606 GN=RPL23A PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-44
Identity = 107/157 (68.15%), Postives = 113/157 (71.97%), Query Frame = 0 

Query: 1   MAPKADSSKKA----DPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPK 60
           MAPKA     A              KAV  G    KK KKIRTS TF RPKTL+  R PK
Sbjct: 1   MAPKAKKEAPAXXXXXXXXXXXXAKKAVLKGVHSHKK-KKIRTSPTFRRPKTLRLRRQPK 60

Query: 61  YPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDI 120
           YPR SA  RNKLD Y I+K+PLTTESAMKKIEDNNTLVFIVD++ANK  IK AVKK+YDI
Sbjct: 61  YPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDI 120

Query: 121 QTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
              KVNTLIRPDG KKAYVRL PDYDALDVANKIGII
Sbjct: 121 DVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 156

[Close]
BLAST of Cla97C07G131430 vs. TAIR10
Match: AT3G55280.1 (ribosomal protein L23AB)

HSP 1 Score: 215.7 bits (548), Expect = 2.0e-56
Identity = 112/122 (91.80%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 32  KKAKKIRTSVTFHRPKTLKKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNN 91
           K AKKIRT VTFHRPKTL   R PKYP+ISATPRNKLD YQILKYPLTTESAMKKIEDNN
Sbjct: 33  KPAKKIRTKVTFHRPKTLTVPRKPKYPKISATPRNKLDHYQILKYPLTTESAMKKIEDNN 92

Query: 92  TLVFIVDIRANKKNIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 151
           TLVFIVDIRA+KK IKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG
Sbjct: 93  TLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIG 152

Query: 152 II 154
           II
Sbjct: 153 II 154

[Close]
BLAST of Cla97C07G131430 vs. TAIR10
Match: AT2G39460.1 (ribosomal protein L23AA)

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-43
Identity = 88/91 (96.70%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 63  TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKNIKDAVKKMYDIQTKKVN 122
           TPRNKLD YQILKYPLTTESAMKKIEDNNTLVFIVDIRA+KK IKDAVKKMYDIQTKKVN
Sbjct: 64  TPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVN 123

Query: 123 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 154
           TLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 124 TLIRPDGTKKAYVRLTPDYDALDVANKIGII 154

The following BLAST results are available for this feature:
BLAST of Cla97C07G131430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147702.12.3e-7499.35PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus] >XP_008461635.1 PRE... [more]
XP_022139271.12.8e-7297.3960S ribosomal protein L23a [Momordica charantia][more]
XP_022134285.13.1e-7196.0860S ribosomal protein L23A [Momordica charantia][more]
XP_015867602.17.6e-7094.1260S ribosomal protein L23A [Ziziphus jujuba] >XP_015867603.1 60S ribosomal prote... [more]
XP_010096658.11.7e-6993.4660S ribosomal protein L23a [Morus notabilis] >EXB65326.1 60S ribosomal protein L... [more]
BLAST of Cla97C07G131430 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CFM9|A0A1S3CFM9_CUCME1.5e-7499.3560S ribosomal protein L23a OS=Cucumis melo OX=3656 GN=LOC103500191 PE=3 SV=1[more]
tr|W9R299|W9R299_9ROSA1.1e-6993.4660S ribosomal protein L23A OS=Morus notabilis OX=981085 GN=L484_025406 PE=3 SV=1[more]
tr|I1MDJ2|I1MDJ2_SOYBN1.9e-6994.12Uncharacterized protein OS=Glycine max OX=3847 GN=100785534 PE=3 SV=1[more]
tr|M5X1F0|M5X1F0_PRUPE3.2e-6993.51Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G228900 PE=3 SV=1[more]
tr|A0A2H5NYT5|A0A2H5NYT5_CITUN3.2e-6992.81Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088340 PE=3 SV=1[more]
BLAST of Cla97C07G131430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9AT35|RL23A_DAUCA1.1e-6790.9160S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1[more]
sp|O22644|RL23A_FRIAG1.7e-6588.9660S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1[more]
sp|Q9M3C3|R23A2_ARATH3.6e-5591.8060S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=... [more]
sp|Q24JY1|RL23A_BOVIN3.7e-4468.1560S ribosomal protein L23a OS=Bos taurus OX=9913 GN=RPL23A PE=2 SV=1[more]
sp|P62750|RL23A_HUMAN3.7e-4468.1560S ribosomal protein L23a OS=Homo sapiens OX=9606 GN=RPL23A PE=1 SV=1[more]
BLAST of Cla97C07G131430 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G55280.12.0e-5691.80ribosomal protein L23AB[more]
AT2G39460.11.5e-4396.70ribosomal protein L23AA[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR001014Ribosomal_L23/L25_CS
IPR005633Ribosomal_L23/L25_N
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
IPR019985Ribosomal_L23
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0000027 ribosomal large subunit assembly
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0019843 rRNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G131430.1Cla97C07G131430.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 77..153
e-value: 2.0E-29
score: 99.7
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 73..135
e-value: 5.4E-15
score: 55.4
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 73..153
score: 22.516
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 34..153
e-value: 1.4E-60
score: 204.6
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 14..62
e-value: 2.1E-18
score: 66.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR11620:SF14SUBFAMILY NOT NAMEDcoord: 1..153
NoneNo IPR availablePANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 1..153
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 131..146
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILYSSF54189Ribosomal proteins S24e, L23 and L15ecoord: 71..146

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C07G131430Cla004031Watermelon (97103) v1wmwmbB177
Cla97C07G131430Cla004702Watermelon (97103) v1wmwmbB039
Cla97C07G131430Csa5G180850Cucumber (Chinese Long) v2cuwmbB392
Cla97C07G131430MELO3C023835Melon (DHL92) v3.5.1mewmbB065
Cla97C07G131430ClCG07G003080Watermelon (Charleston Gray)wcgwmbB307
Cla97C07G131430CSPI05G09450Wild cucumber (PI 183967)cpiwmbB412
Cla97C07G131430CSPI05G17250Wild cucumber (PI 183967)cpiwmbB416
Cla97C07G131430Cucsa.165510Cucumber (Gy14) v1cgywmbB295
Cla97C07G131430CmaCh04G012060Cucurbita maxima (Rimu)cmawmbB780
Cla97C07G131430CmoCh04G012800Cucurbita moschata (Rifu)cmowmbB754
Cla97C07G131430Lsi02G016760Bottle gourd (USVL1VR-Ls)lsiwmbB205
Cla97C07G131430Lsi04G008650Bottle gourd (USVL1VR-Ls)lsiwmbB296
Cla97C07G131430CsGy5G006770Cucumber (Gy14) v2cgybwmbB375
Cla97C07G131430MELO3C023835.2Melon (DHL92) v3.6.1medwmbB061
Cla97C07G131430Carg00284Silver-seed gourdcarwmbB0700
Cla97C07G131430Carg23790Silver-seed gourdcarwmbB0903
Cla97C07G131430CsaV3_5G026230Cucumber (Chinese Long) v3cucwmbB412
Cla97C07G131430CsaV3_5G006850Cucumber (Chinese Long) v3cucwmbB407
Cla97C07G131430Bhi07G000798Wax gourdwgowmbB539
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C07G131430Cla97C09G181610Watermelon (97103) v2wmbwmbB170
The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C07G131430Cucurbita maxima (Rimu)cmawmbB781
Cla97C07G131430Cucurbita moschata (Rifu)cmowmbB755