Cla97C07G129130 (gene) Watermelon (97103) v2

Overview
NameCla97C07G129130
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr07 : 853027 .. 853311 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCCAATTCACTTTCCTTTTAGCCATTTTGCTTCTTCTTGCCAATGCTCATCAGCTCCAAAGTTGTAGAACCATGAAACATGATCGTCAAAATTGGTCCATGCTGATTCAACAGTCGCTGCAGAGGGCGCCCGTACCTCCGTCCGCCCGAGACGGTGGCACCAACATTCCGGTTCCGGTTGGGCAACAGGCCTTTGCCGGAAAATTCACGGCGCCGCCGGCATACGCCTATCCAGATCATCTATTGGTTCCTTCTGGTGTGGCCTTGAAGACAAATTGA

mRNA sequence

ATGAAGATCCAATTCACTTTCCTTTTAGCCATTTTGCTTCTTCTTGCCAATGCTCATCAGCTCCAAAGTTGTAGAACCATGAAACATGATCGTCAAAATTGGTCCATGCTGATTCAACAGTCGCTGCAGAGGGCGCCCGTACCTCCGTCCGCCCGAGACGGTGGCACCAACATTCCGGTTCCGGTTGGGCAACAGGCCTTTGCCGGAAAATTCACGGCGCCGCCGGCATACGCCTATCCAGATCATCTATTGGTTCCTTCTGGTGTGGCCTTGAAGACAAATTGA

Coding sequence (CDS)

ATGAAGATCCAATTCACTTTCCTTTTAGCCATTTTGCTTCTTCTTGCCAATGCTCATCAGCTCCAAAGTTGTAGAACCATGAAACATGATCGTCAAAATTGGTCCATGCTGATTCAACAGTCGCTGCAGAGGGCGCCCGTACCTCCGTCCGCCCGAGACGGTGGCACCAACATTCCGGTTCCGGTTGGGCAACAGGCCTTTGCCGGAAAATTCACGGCGCCGCCGGCATACGCCTATCCAGATCATCTATTGGTTCCTTCTGGTGTGGCCTTGAAGACAAATTGA

Protein sequence

MKIQFTFLLAILLLLANAHQLQSCRTMKHDRQNWSMLIQQSLQRAPVPPSARDGGTNIPVPVGQQAFAGKFTAPPAYAYPDHLLVPSGVALKTN
Homology
[Close]
BLAST of Cla97C07G129130 vs. NCBI nr
Match: KGN57926.1 (hypothetical protein Csa_3G393150 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 4.7e-22
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 1  MKIQFTFLLAILLLLANAHQLQSCRTMKHDRQNWSM---LIQQSLQRAPVPPSARDGGTN 60
          MKIQF+FLLAIL+LLAN H LQSCRT+K D+QNWS+   L+QQSLQR PVPPSA++G TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQQAFAGKFTAPPAYAY 80
          IPVPVGQ+AFAGK +A  A  Y
Sbjct: 61 IPVPVGQRAFAGKTSAALARNY 82

[Close]
BLAST of Cla97C07G129130 vs. TrEMBL
Match: tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.1e-22
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0 

Query: 1  MKIQFTFLLAILLLLANAHQLQSCRTMKHDRQNWSM---LIQQSLQRAPVPPSARDGGTN 60
          MKIQF+FLLAIL+LLAN H LQSCRT+K D+QNWS+   L+QQSLQR PVPPSA++G TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQQAFAGKFTAPPAYAY 80
          IPVPVGQ+AFAGK +A  A  Y
Sbjct: 61 IPVPVGQRAFAGKTSAALARNY 82

The following BLAST results are available for this feature:
BLAST of Cla97C07G129130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57926.14.7e-2271.95hypothetical protein Csa_3G393150 [Cucumis sativus][more]
BLAST of Cla97C07G129130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LCY5|A0A0A0LCY5_CUCSA3.1e-2271.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1[more]
BLAST of Cla97C07G129130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C07G129130 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C07G129130.1Cla97C07G129130.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 1..91

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C07G129130Wax gourdwgowmbB261
Cla97C07G129130Watermelon (97103) v2wmbwmbB141
Cla97C07G129130Watermelon (97103) v2wmbwmbB156
Cla97C07G129130Silver-seed gourdcarwmbB0238
Cla97C07G129130Silver-seed gourdcarwmbB0788
Cla97C07G129130Silver-seed gourdcarwmbB0821
Cla97C07G129130Cucumber (Gy14) v2cgybwmbB148
Cla97C07G129130Cucumber (Gy14) v2cgybwmbB231
Cla97C07G129130Cucurbita maxima (Rimu)cmawmbB273
Cla97C07G129130Cucurbita maxima (Rimu)cmawmbB540
Cla97C07G129130Cucurbita maxima (Rimu)cmawmbB657
Cla97C07G129130Cucurbita maxima (Rimu)cmawmbB927
Cla97C07G129130Cucurbita moschata (Rifu)cmowmbB253
Cla97C07G129130Cucurbita moschata (Rifu)cmowmbB521
Cla97C07G129130Cucurbita moschata (Rifu)cmowmbB631
Cla97C07G129130Wild cucumber (PI 183967)cpiwmbB157
Cla97C07G129130Wild cucumber (PI 183967)cpiwmbB250
Cla97C07G129130Cucumber (Chinese Long) v3cucwmbB155
Cla97C07G129130Cucumber (Chinese Long) v3cucwmbB244
Cla97C07G129130Cucumber (Chinese Long) v2cuwmbB154
Cla97C07G129130Cucumber (Chinese Long) v2cuwmbB241
Cla97C07G129130Bottle gourd (USVL1VR-Ls)lsiwmbB029
Cla97C07G129130Bottle gourd (USVL1VR-Ls)lsiwmbB346
Cla97C07G129130Melon (DHL92) v3.6.1medwmbB391
Cla97C07G129130Melon (DHL92) v3.6.1medwmbB445
Cla97C07G129130Melon (DHL92) v3.5.1mewmbB403
Cla97C07G129130Melon (DHL92) v3.5.1mewmbB451
Cla97C07G129130Watermelon (Charleston Gray)wcgwmbB242
Cla97C07G129130Watermelon (Charleston Gray)wcgwmbB275
Cla97C07G129130Watermelon (Charleston Gray)wcgwmbB307
Cla97C07G129130Watermelon (97103) v1wmwmbB175
Cla97C07G129130Watermelon (97103) v1wmwmbB221
Cla97C07G129130Watermelon (97103) v1wmwmbB413