Cla97C06G125790 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G125790
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	RWP-RK domain-containing protein
Location	Cla97Chr06 : 27677776 .. 27679132 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCACTTGGGGGCCGAAGTGTGAAGTAATGGTCTTTGAAGATTCTTTTCCTTTATCTTGTCAACTTTCTCCTCTCCCTTTTAGGTGACTTTTAATTTTTCAAAATTTTGATTTTTTTCGTACTCTTTATTTGAATTTCTTTCTTACTATATAATATAATTTCATGTAGATCAAGCTACAACAATTATTCTGGATTGGATTGGAATTGCAACTTTGGGTTGCAAGATAACATTTTTGAAGTTGTTCCTTTGTTGGAGAGTTTCCCAAATAATGACTCGTTTTTGGAATCAAAGGATATAGTACCTATAAACACCTTTATATCAGGTAATTGATTCATCATCATCATACGATATATTAATTTTGAAAAAAAAAAAGCATATTATATTCCATTTATAACGATAAAGATTAAAACTTTTTGGTTTTTCAGAAGATGGGGTTGGGATTTGGAGTGAAATGGAAAATGGCATATTTGGCTTTGTTGAGGAAGAACCTGTTTTATTGCTAGAAGGAGAAGATGGTGGAGGAAATGAAGAAAATAGAGAAGTGATGAAGAAGGGGAAAAGAAAGTATTTGAGATCAGAAAATAGCAAAAACAATGGGAGTTATTCAACATCATCATCATCTTCAAAAATGCTGTCAAGAAAAGCAATATCTGAGTATTTCTACATGCCCATAACTCAGGCTGCTAAAGAGCTTAATGTGGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGAATAAGAAGATGGCCTCATAGGAAGTTGATGAGCCTACAAACCCTAATCAAGAATGTCAAGGTATGTCTCTCTCGTTCCCTCCATTGTCATCTGTGAGCTCTATTTATCCATTTAGAAACGAGTAATACTTAGGTGCATCCTTGACTACATTCATTTTTGTGCCGTCTACTATATTGTCTAATCACATTTTGTAACTTGACAATTATATATATATACTTTTTGTTCAAAGAGAATGTATGAAGATAAACTACACTCAAGTATCACATGTCAAATTGTGTTTAACACAAAGATGGACGCAATTGAAATGCATTCAAATATTTTTCGTCCATTATCTTTATTGTTTGCTATATGCATCAGTATCTTTTTAAAAAAAATGAAGTCATTGGAATTTAAAAAAAAGAAAAGATTTAATTAGTTGACAAAATCATGGTGTGAACAAAGAGAGTATGATACTCACGTAGTAATAGAAAGTTCCATTTTCTATTTTCTATAACCTATTAGATTTGATCTAATATGTCTTAGTGTAGTGTTTATTTTAAGAAAATGAATCGTGAAATGAATGCAGGAGATTGAAAAGGGAGAAGGAGAGGGAAATGGAGAGAATAAGTTGA

mRNA sequence

ATGGACGCCACTTGGGGGCCGAAGTGTGAAGTAATGGTCTTTGAAGATTCTTTTCCTTTATCTTGTCAACTTTCTCCTCTCCCTTTTAGATCAAGCTACAACAATTATTCTGGATTGGATTGGAATTGCAACTTTGGGTTGCAAGATAACATTTTTGAAGTTGTTCCTTTGTTGGAGAGTTTCCCAAATAATGACTCGTTTTTGGAATCAAAGGATATAGTACCTATAAACACCTTTATATCAGAAGATGGGGTTGGGATTTGGAGTGAAATGGAAAATGGCATATTTGGCTTTGTTGAGGAAGAACCTGTTTTATTGCTAGAAGGAGAAGATGGTGGAGGAAATGAAGAAAATAGAGAAGTGATGAAGAAGGGGAAAAGAAAGTATTTGAGATCAGAAAATAGCAAAAACAATGGGAGTTATTCAACATCATCATCATCTTCAAAAATGCTGTCAAGAAAAGCAATATCTGAGTATTTCTACATGCCCATAACTCAGGCTGCTAAAGAGCTTAATGTGGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGAATAAGAAGATGGCCTCATAGGAAGAGATTGAAAAGGGAGAAGGAGAGGGAAATGGAGAGAATAAGTTGA

Coding sequence (CDS)

ATGGACGCCACTTGGGGGCCGAAGTGTGAAGTAATGGTCTTTGAAGATTCTTTTCCTTTATCTTGTCAACTTTCTCCTCTCCCTTTTAGATCAAGCTACAACAATTATTCTGGATTGGATTGGAATTGCAACTTTGGGTTGCAAGATAACATTTTTGAAGTTGTTCCTTTGTTGGAGAGTTTCCCAAATAATGACTCGTTTTTGGAATCAAAGGATATAGTACCTATAAACACCTTTATATCAGAAGATGGGGTTGGGATTTGGAGTGAAATGGAAAATGGCATATTTGGCTTTGTTGAGGAAGAACCTGTTTTATTGCTAGAAGGAGAAGATGGTGGAGGAAATGAAGAAAATAGAGAAGTGATGAAGAAGGGGAAAAGAAAGTATTTGAGATCAGAAAATAGCAAAAACAATGGGAGTTATTCAACATCATCATCATCTTCAAAAATGCTGTCAAGAAAAGCAATATCTGAGTATTTCTACATGCCCATAACTCAGGCTGCTAAAGAGCTTAATGTGGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGAATAAGAAGATGGCCTCATAGGAAGAGATTGAAAAGGGAGAAGGAGAGGGAAATGGAGAGAATAAGTTGA

Protein sequence

MDATWGPKCEVMVFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFGFVEEEPVLLLEGEDGGGNEENREVMKKGKRKYLRSENSKNNGSYSTSSSSSKMLSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKRLKREKEREMERIS

Homology

[Close]

BLAST of Cla97C06G125790 vs. NCBI nr
Match: XP_023516752.1 (protein RKD1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 6.5e-48
Identity = 127/195 (65.13%), Postives = 138/195 (70.77%), Query Frame = 0


Query: 1   MDATWGPKCEVMVFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLES 60
           M ATW PKCE M FED FPLSC LSPL  R+  +NYS LDWNCNFG  D+ F+VVPLLES
Sbjct: 1   MGATWRPKCEAMAFEDPFPLSCHLSPLHCRT--DNYSALDWNCNFGFPDSFFDVVPLLES 60

Query: 61  FPNNDSFLESKDIVPINTFISED-GVGIWSEMENGIFGFVEXXXXXXXXXXXXXXXXXXX 120
             NNDSF + KDI PI++FISED GVGIWSE+E+  FG  E            XXXXXXX
Sbjct: 61  CTNNDSFFDPKDIDPISSFISEDGGVGIWSELESEAFGVEE---------GGGXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVGLTLLK 180
           XX                   XXXXXXXXX  SR+AISEYFYMPITQAAK+LNVGLTLLK
Sbjct: 121 XXEGTMMRKAKRKCCRETSNGXXXXXXXXXTLSREAISEYFYMPITQAAKQLNVGLTLLK 180

Query: 181 KRCRELGIRRWPHRK 195
           KRCRELGIRRWPHRK
Sbjct: 181 KRCRELGIRRWPHRK 184

[Close]

BLAST of Cla97C06G125790 vs. NCBI nr
Match: XP_022987515.1 (protein RKD1-like [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 1.9e-47
Identity = 114/195 (58.46%), Postives = 122/195 (62.56%), Query Frame = 0


Query: 1   MDATWGPKCEVMVFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLES 60
           M ATW PKCE M FED FPLSC LSPL  R+  +NYS LDWNCNFG  D  F+VVPLLES
Sbjct: 1   MGATWRPKCEAMAFEDPFPLSCHLSPLHCRT--DNYSALDWNCNFGFPDTFFDVVPLLES 60

Query: 61  FPNNDSFLESKDIVPINTFISED-GVGIWSEMENGIFGFVEXXXXXXXXXXXXXXXXXXX 120
             NNDSF   KDI PI+TFISED GVGIWSE E+  FG  E                   
Sbjct: 61  CANNDSFFNPKDIDPISTFISEDGGVGIWSEFESEAFGLEE---------GSGENGNGGM 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVGLTLLK 180
                                 XXXXX     SR+AISE+FYMPITQAAK+LNVGLTLLK
Sbjct: 121 GNEGTMMRKAKRKCCRETSNSSXXXXXSTKTLSREAISEFFYMPITQAAKQLNVGLTLLK 180

Query: 181 KRCRELGIRRWPHRK 195
           KRCRELGIRRWPHRK
Sbjct: 181 KRCRELGIRRWPHRK 184

[Close]

BLAST of Cla97C06G125790 vs. NCBI nr
Match: XP_022921381.1 (protein RKD2-like [Cucurbita moschata])

HSP 1 Score: 196.4 bits (498), Expect = 9.4e-47
Identity = 116/195 (59.49%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 1   MDATWGPKCEVMVFEDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLES 60
           M ATW PKCE M FED FPLSC LSPL  R+  +NYS LDWNCNFG  D+ F+VVPLLES
Sbjct: 1   MGATWRPKCEAMAFEDPFPLSCHLSPLHCRT--DNYSALDWNCNFGFPDSFFDVVPLLES 60

Query: 61  FPNNDSFLESKDIVPINTFISED-GVGIWSEMENGIFGFVEXXXXXXXXXXXXXXXXXXX 120
             NNDSF + KDI P ++FISED GVGIWSE+E+  FG  E              XXXXX
Sbjct: 61  CANNDSFFDPKDIDPFSSFISEDGGVGIWSELESEAFGVEE-----------GGGXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVGLTLLK 180
           XXXX                            SR+ ISEYFYMPITQAAK LNVGLTLLK
Sbjct: 121 XXXXEGTMMRKAKRKCCRETSNGSGSASTKALSREVISEYFYMPITQAAKHLNVGLTLLK 180

Query: 181 KRCRELGIRRWPHRK 195
           KRCRELGIRRWPHRK
Sbjct: 181 KRCRELGIRRWPHRK 182

[Close]

BLAST of Cla97C06G125790 vs. NCBI nr
Match: XP_008453676.1 (PREDICTED: protein RKD1-like [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-40
Identity = 154/200 (77.00%), Postives = 165/200 (82.50%), Query Frame = 0


Query: 1   MDATWGPKCEVMVFED-SFPLSCQLSPLPFRSSYNN-YSGLDWN-CNFGLQDNIFEVVPL 60
           MD +W  KCE+M FED S+  SC LSP+ FRSSYNN YSGLDWN  NFGLQDNIFE    
Sbjct: 1   MDPSWRHKCEIMSFEDHSYHFSCNLSPIHFRSSYNNSYSGLDWNYTNFGLQDNIFE---- 60

Query: 61  LESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFGFVE---XXXXXXXXXXXXXX 120
                  D FL+ KDIVPINT+ISEDGVGIW+ M++G+F  VE   XXXXXXXXXXXXXX
Sbjct: 61  -------DPFLDPKDIVPINTYISEDGVGIWNGMDDGVFEVVEXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVG 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ISEYFYMPIT+AAKELNVG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISEYFYMPITRAAKELNVG 180

Query: 181 LTLLKKRCRELGIRRWPHRK 195
           LTLLKKRCRELGIRRWPHRK
Sbjct: 181 LTLLKKRCRELGIRRWPHRK 189

[Close]

BLAST of Cla97C06G125790 vs. NCBI nr
Match: KGN63670.1 (hypothetical protein Csa_1G009740 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.8e-34
Identity = 147/206 (71.36%), Postives = 159/206 (77.18%), Query Frame = 0


Query: 1   MDATWGPKCEVM-VFEDSFPLSCQLSPLPF---RSSYN-NYSGLDWN-CNFGLQDNIFEV 60
           MD +W PKCE+M  FEDS+P SC LSP+ F   RSSYN NYSGLDWN  NFGLQ+NIFE 
Sbjct: 1   MDPSWRPKCEIMPSFEDSYPFSCNLSPIHFSSYRSSYNHNYSGLDWNYANFGLQENIFE- 60

Query: 61  VPLLESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFG------FVEXXXXXXXX 120
                     +SFL+ +DIVPINT+ISED VGIW+EM+NG+FG         XXXXXXXX
Sbjct: 61  ----------ESFLDPEDIVPINTYISEDEVGIWNEMDNGVFGVXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           PITQAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPITQAA 180

Query: 181 KELNVGLTLLKKRCRELGIRRWPHRK 195
           KELNVGLTLLKKRCRELGI RWPHRK
Sbjct: 181 KELNVGLTLLKKRCRELGIGRWPHRK 195

[Close]

BLAST of Cla97C06G125790 vs. TrEMBL
Match: tr|A0A1S3BWU6|A0A1S3BWU6_CUCME (protein RKD1-like OS=Cucumis melo OX=3656 GN=LOC103494325 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.7e-41
Identity = 154/200 (77.00%), Postives = 165/200 (82.50%), Query Frame = 0


Query: 1   MDATWGPKCEVMVFED-SFPLSCQLSPLPFRSSYNN-YSGLDWN-CNFGLQDNIFEVVPL 60
           MD +W  KCE+M FED S+  SC LSP+ FRSSYNN YSGLDWN  NFGLQDNIFE    
Sbjct: 1   MDPSWRHKCEIMSFEDHSYHFSCNLSPIHFRSSYNNSYSGLDWNYTNFGLQDNIFE---- 60

Query: 61  LESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFGFVE---XXXXXXXXXXXXXX 120
                  D FL+ KDIVPINT+ISEDGVGIW+ M++G+F  VE   XXXXXXXXXXXXXX
Sbjct: 61  -------DPFLDPKDIVPINTYISEDGVGIWNGMDDGVFEVVEXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVG 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ISEYFYMPIT+AAKELNVG
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISEYFYMPITRAAKELNVG 180

Query: 181 LTLLKKRCRELGIRRWPHRK 195
           LTLLKKRCRELGIRRWPHRK
Sbjct: 181 LTLLKKRCRELGIRRWPHRK 189

[Close]

BLAST of Cla97C06G125790 vs. TrEMBL
Match: tr|A0A0A0LP42|A0A0A0LP42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009740 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 147/206 (71.36%), Postives = 159/206 (77.18%), Query Frame = 0


Query: 1   MDATWGPKCEVM-VFEDSFPLSCQLSPLPF---RSSYN-NYSGLDWN-CNFGLQDNIFEV 60
           MD +W PKCE+M  FEDS+P SC LSP+ F   RSSYN NYSGLDWN  NFGLQ+NIFE 
Sbjct: 1   MDPSWRPKCEIMPSFEDSYPFSCNLSPIHFSSYRSSYNHNYSGLDWNYANFGLQENIFE- 60

Query: 61  VPLLESFPNNDSFLESKDIVPINTFISEDGVGIWSEMENGIFG------FVEXXXXXXXX 120
                     +SFL+ +DIVPINT+ISED VGIW+EM+NG+FG         XXXXXXXX
Sbjct: 61  ----------ESFLDPEDIVPINTYISEDEVGIWNEMDNGVFGVXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           PITQAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPITQAA 180

Query: 181 KELNVGLTLLKKRCRELGIRRWPHRK 195
           KELNVGLTLLKKRCRELGI RWPHRK
Sbjct: 181 KELNVGLTLLKKRCRELGIGRWPHRK 195

[Close]

BLAST of Cla97C06G125790 vs. TrEMBL
Match: tr|A0A2N9H073|A0A2N9H073_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32866 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19
Identity = 73/183 (39.89%), Postives = 82/183 (44.81%), Query Frame = 0


Query: 15  EDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIV 74
           ED F    Q+  L   +    YS LDW     LQ+ I +VVPL  SFP  D    + D+ 
Sbjct: 25  EDPFLFPSQMPSLDLSA----YSSLDWQYEMPLQEGILDVVPLTASFP-TDPLYATLDLE 84

Query: 75  PINTFISED---GVGIWSEMENGIFGFVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 134
           P  T   +D     G  SE  N IF  +E                               
Sbjct: 85  PTTTLTQDDLFFDCGNRSEFWNEIFAGLE-------------PRNQALVQSSNNDEGKEV 144

Query: 135 XXXXXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWP 194
                               SRK IS+YFYMPITQAAKELNVGLTLLKKRCRELGIRRWP
Sbjct: 145 KEERKTKRCREERSSSSRMLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWP 189

[Close]

BLAST of Cla97C06G125790 vs. TrEMBL
Match: tr|A0A0R0JQB7|A0A0R0JQB7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G026500 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.0e-17
Identity = 61/180 (33.89%), Postives = 84/180 (46.67%), Query Frame = 0


Query: 15  EDSFPLSCQLSPLPFRSSYNNYSGLDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIV 74
           E+ FP +CQ S   +  +   Y  LDW  +F +QD   + VPL++ +P +D   E+    
Sbjct: 11  EEPFPFTCQFS---YSGNSEVYPSLDWPYDFPIQDYYIDAVPLMDYYP-SDPLYETLTTE 70

Query: 75  PINTFISEDGVGIWSEMENGIFGFVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 134
           P  +    D    + +++ G+  + E                                  
Sbjct: 71  PTQSVQDYD----FYDIKKGLPFWKEVDAVFDSQKVFLFGNNEESGTKKEMMEDGKVNDN 130

Query: 135 XXXXXXXXXXXXXXXXXSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 194
                            SRK IS+YFYMPITQAA+ELNVG+TLLKKRCRE+GIRRWPHRK
Sbjct: 131 RGIEERISGSSSSCRMLSRKTISQYFYMPITQAARELNVGITLLKKRCREVGIRRWPHRK 182

[Close]

BLAST of Cla97C06G125790 vs. TrEMBL
Match: tr|A0A1U8AA29|A0A1U8AA29_NELNU (protein RKD1-like OS=Nelumbo nucifera OX=4432 GN=LOC104598204 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16
Identity = 59/164 (35.98%), Postives = 76/164 (46.34%), Query Frame = 0


Query: 39  LDWNCNFGLQDNIFEVVPLLESFPNNDSFLESKDIVPINTFISED--------GVGIWSE 98
           L W   F + ++IFE +PL+ESFP +  +   ++    N F+ ++        G+GIW +
Sbjct: 37  LSWQWEFPIPESIFEPIPLMESFPTDPIYTSIEEFE--NPFLCQEDFYIGHRNGIGIWDD 96

Query: 99  MENGIFGFVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 158
           +    FGF                                                    
Sbjct: 97  LN---FGF------------EVETGKEIILYNDNSKEAGESLIREKPKRVREEKSLGSNE 156

Query: 159 XSRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
            +R  IS YFYMPITQAAKELN+GLTLLKKRCRELGIRRWPHRK
Sbjct: 157 LTRSTISRYFYMPITQAAKELNIGLTLLKKRCRELGIRRWPHRK 183

[Close]

BLAST of Cla97C06G125790 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKRLKREK 201
           S++ IS YFYMPITQAA+ELN+GLTLLKKRCRELGI+RWPHRK +  +K
Sbjct: 129 SKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQK 177

[Close]

BLAST of Cla97C06G125790 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           S++ +S YFYMPITQAA  LNVGLTLLK+RCRELGIRRWPHRK
Sbjct: 136 SKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

[Close]

BLAST of Cla97C06G125790 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           SR+ + +YFYMPIT+AAKELN+G+TLLKKRCRELGI RWPHRK
Sbjct: 160 SREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRK 202

[Close]

BLAST of Cla97C06G125790 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.2e-10
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 156 ISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           I ++F  PI +AAKELNVGLT+LKKRCRELGI RWPHRK
Sbjct: 153 IKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

[Close]

BLAST of Cla97C06G125790 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-07
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK---------RLKREKER 207
           S + +S+YF + I +A++ L VGLT+LKK+CRE GI RWPHRK          L+RE E+
Sbjct: 243 SLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEK 302

[Close]

BLAST of Cla97C06G125790 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15
Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKRLKREK 201
           S++ IS YFYMPITQAA+ELN+GLTLLKKRCRELGI+RWPHRK +  +K
Sbjct: 129 SKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKRWPHRKLMSLQK 177

[Close]

BLAST of Cla97C06G125790 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 35/43 (81.40%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           S++ +S YFYMPITQAA  LNVGLTLLK+RCRELGIRRWPHRK
Sbjct: 136 SKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 178

[Close]

BLAST of Cla97C06G125790 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           SR+ + +YFYMPIT+AAKELN+G+TLLKKRCRELGI RWPHRK
Sbjct: 160 SREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGIPRWPHRK 202

[Close]

BLAST of Cla97C06G125790 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.5e-11
Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 156 ISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK 195
           I ++F  PI +AAKELNVGLT+LKKRCRELGI RWPHRK
Sbjct: 153 IKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRK 191

[Close]

BLAST of Cla97C06G125790 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 152 SRKAISEYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRK---------RLKREKER 207
           S + +S+YF + I +A++ L VGLT+LKK+CRE GI RWPHRK          L+RE E+
Sbjct: 243 SLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHRKIKSLDCLIHDLQREAEK 302

The following BLAST results are available for this feature:

BLAST of Cla97C06G125790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516752.1	6.5e-48	65.13	protein RKD1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987515.1	1.9e-47	58.46	protein RKD1-like [Cucurbita maxima]	[more]
XP_022921381.1	9.4e-47	59.49	protein RKD2-like [Cucurbita moschata]	[more]
XP_008453676.1	1.3e-40	77.00	PREDICTED: protein RKD1-like [Cucumis melo]	[more]
KGN63670.1	1.8e-34	71.36	hypothetical protein Csa_1G009740 [Cucumis sativus]	[more]

BLAST of Cla97C06G125790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWU6\|A0A1S3BWU6_CUCME	8.7e-41	77.00	protein RKD1-like OS=Cucumis melo OX=3656 GN=LOC103494325 PE=4 SV=1	[more]
tr\|A0A0A0LP42\|A0A0A0LP42_CUCSA	1.2e-34	71.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009740 PE=4 SV=1	[more]
tr\|A0A2N9H073\|A0A2N9H073_FAGSY	1.9e-19	39.89	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32866 PE=4 SV=1	[more]
tr\|A0A0R0JQB7\|A0A0R0JQB7_SOYBN	3.0e-17	33.89	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G026500 PE=4 SV=1	[more]
tr\|A0A1U8AA29\|A0A1U8AA29_NELNU	1.9e-16	35.98	protein RKD1-like OS=Nelumbo nucifera OX=4432 GN=LOC104598204 PE=4 SV=1	[more]

BLAST of Cla97C06G125790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M9U9\|RKD1_ARATH	3.2e-14	75.51	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
sp\|Q9CA66\|RKD2_ARATH	2.1e-13	81.40	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
sp\|Q9FGD1\|RKD3_ARATH	2.1e-13	79.07	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
sp\|Q9LVU8\|RKD4_ARATH	8.2e-10	76.92	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
sp\|O81791\|RKD5_ARATH	3.8e-07	46.88	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]

BLAST of Cla97C06G125790 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G18790.1	1.8e-15	75.51	RWP-RK domain-containing protein	[more]
AT1G74480.1	1.1e-14	81.40	RWP-RK domain-containing protein	[more]
AT5G66990.1	1.1e-14	79.07	RWP-RK domain-containing protein	[more]
AT5G53040.1	4.5e-11	76.92	RWP-RK domain-containing protein	[more]
AT4G35590.1	2.1e-08	46.88	RWP-RK domain-containing protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003035	RWP-RK_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G125790.1	Cla97C06G125790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 151..195 e-value: 4.9E-20 score: 71.1
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 134..208 score: 15.915
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	PANTHER	PTHR32002	FAMILY NOT NAMED	coord: 132..195
None	No IPR available	PANTHER	PTHR32002:SF27	SUBFAMILY NOT NAMED	coord: 132..195

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G125790	Bhi02G000229	Wax gourd	wgowmbB649

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G125790	Cucumber (Gy14) v2	cgybwmbB076
Cla97C06G125790	Silver-seed gourd	carwmbB0053
Cla97C06G125790	Watermelon (97103) v2	wmbwmbB132
Cla97C06G125790	Watermelon (97103) v2	wmbwmbB125
Cla97C06G125790	Watermelon (97103) v2	wmbwmbB161
Cla97C06G125790	Silver-seed gourd	carwmbB0102
Cla97C06G125790	Silver-seed gourd	carwmbB0414
Cla97C06G125790	Silver-seed gourd	carwmbB0486
Cla97C06G125790	Silver-seed gourd	carwmbB0640
Cla97C06G125790	Cucumber (Gy14) v2	cgybwmbB078
Cla97C06G125790	Cucumber (Gy14) v2	cgybwmbB374
Cla97C06G125790	Cucumber (Gy14) v1	cgywmbB161
Cla97C06G125790	Cucumber (Gy14) v1	cgywmbB370
Cla97C06G125790	Cucumber (Gy14) v1	cgywmbB500
Cla97C06G125790	Cucumber (Gy14) v1	cgywmbB587
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB082
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB131
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB243
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB267
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB430
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB490
Cla97C06G125790	Cucurbita maxima (Rimu)	cmawmbB772
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB071
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB123
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB225
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB247
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB472
Cla97C06G125790	Cucurbita moschata (Rifu)	cmowmbB746
Cla97C06G125790	Wild cucumber (PI 183967)	cpiwmbB079
Cla97C06G125790	Wild cucumber (PI 183967)	cpiwmbB081
Cla97C06G125790	Wild cucumber (PI 183967)	cpiwmbB236
Cla97C06G125790	Wild cucumber (PI 183967)	cpiwmbB411
Cla97C06G125790	Cucumber (Chinese Long) v3	cucwmbB076
Cla97C06G125790	Cucumber (Chinese Long) v3	cucwmbB078
Cla97C06G125790	Cucumber (Chinese Long) v2	cuwmbB078
Cla97C06G125790	Cucumber (Chinese Long) v2	cuwmbB080
Cla97C06G125790	Cucumber (Chinese Long) v2	cuwmbB391
Cla97C06G125790	Bottle gourd (USVL1VR-Ls)	lsiwmbB194
Cla97C06G125790	Bottle gourd (USVL1VR-Ls)	lsiwmbB195
Cla97C06G125790	Bottle gourd (USVL1VR-Ls)	lsiwmbB374
Cla97C06G125790	Melon (DHL92) v3.6.1	medwmbB060
Cla97C06G125790	Melon (DHL92) v3.6.1	medwmbB150
Cla97C06G125790	Melon (DHL92) v3.6.1	medwmbB247
Cla97C06G125790	Melon (DHL92) v3.6.1	medwmbB330
Cla97C06G125790	Melon (DHL92) v3.5.1	mewmbB064
Cla97C06G125790	Melon (DHL92) v3.5.1	mewmbB164
Cla97C06G125790	Melon (DHL92) v3.5.1	mewmbB261
Cla97C06G125790	Watermelon (Charleston Gray)	wcgwmbB027
Cla97C06G125790	Watermelon (Charleston Gray)	wcgwmbB049
Cla97C06G125790	Watermelon (Charleston Gray)	wcgwmbB202
Cla97C06G125790	Watermelon (Charleston Gray)	wcgwmbB235
Cla97C06G125790	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G125790	Watermelon (97103) v1	wmwmbB032
Cla97C06G125790	Watermelon (97103) v1	wmwmbB215
Cla97C06G125790	Watermelon (97103) v1	wmwmbB301
Cla97C06G125790	Watermelon (97103) v1	wmwmbB406
Cla97C06G125790	Wax gourd	wgowmbB139
Cla97C06G125790	Wax gourd	wgowmbB496
Cla97C06G125790	Wax gourd	wgowmbB535