Cla97C06G123070 (gene) Watermelon (97103) v2

NameCla97C06G123070
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr06 : 25379649 .. 25379945 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTTGGTTTGGGGGCTGTAATCAGAGATGAATTTGGGGTGTTGGTGGCAGCCCACGTTGTCTTTCGTTCTGTGAGTTTGGAGGCGGAGGCAGGGGAAGCTCCTGTGTTGTTGGAGGGTTTAAAATTGGCTGAAGCTTGTGGGAGTTATCAGGTGTGGATTGAAATTGATGCTGAAGTTGTTAAGAAAATACATGCTTTGAGTTTTGCCCTCCCCTTGGGGGTCATTTATGCAAAGATCTACAACCTGATGATTACACTAAGAAGCACTGGTTTAAGTTTTGCCCATGCGTGA

mRNA sequence

ATGGGGGTTGGTTTGGGGGCTGTAATCAGAGATGAATTTGGGGTGTTGGTGGCAGCCCACGTTGTCTTTCGTTCTGTGAGTTTGGAGGCGGAGGCAGGGGAAGCTCCTGTGTTGTTGGAGGGTTTAAAATTGGCTGAAGCTTGTGGGAGTTATCAGGTGTGGATTGAAATTGATGCTGAAGTTGTTAAGAAAATACATGCTTTGAGTTTTGCCCTCCCCTTGGGGGTCATTTATGCAAAGATCTACAACCTGATGATTACACTAAGAAGCACTGGTTTAAGTTTTGCCCATGCGTGA

Coding sequence (CDS)

ATGGGGGTTGGTTTGGGGGCTGTAATCAGAGATGAATTTGGGGTGTTGGTGGCAGCCCACGTTGTCTTTCGTTCTGTGAGTTTGGAGGCGGAGGCAGGGGAAGCTCCTGTGTTGTTGGAGGGTTTAAAATTGGCTGAAGCTTGTGGGAGTTATCAGGTGTGGATTGAAATTGATGCTGAAGTTGTTAAGAAAATACATGCTTTGAGTTTTGCCCTCCCCTTGGGGGTCATTTATGCAAAGATCTACAACCTGATGATTACACTAAGAAGCACTGGTTTAAGTTTTGCCCATGCGTGA

Protein sequence

MGVGLGAVIRDEFGVLVAAHVVFRSVSLEAEAGEAPVLLEGLKLAEACGSYQVWIEIDAEVVKKIHALSFALPLGVIYAKIYNLMITLRSTGLSFAHA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G123070.1Cla97C06G123070.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13456RVT_3coord: 4..68
e-value: 1.5E-6
score: 28.0

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G123070Cla018854Watermelon (97103) v1wmwmbB406
Cla97C06G123070ClCG06G013590Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G123070Bhi06G001079Wax gourdwgowmbB142
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G123070Watermelon (97103) v2wmbwmbB073
Cla97C06G123070Silver-seed gourdcarwmbB0623
Cla97C06G123070Silver-seed gourdcarwmbB0827
Cla97C06G123070Silver-seed gourdcarwmbB1049
Cla97C06G123070Cucumber (Gy14) v2cgybwmbB064
Cla97C06G123070Cucumber (Gy14) v2cgybwmbB137
Cla97C06G123070Cucumber (Gy14) v1cgywmbB080
Cla97C06G123070Cucumber (Gy14) v1cgywmbB103
Cla97C06G123070Cucurbita maxima (Rimu)cmawmbB081
Cla97C06G123070Cucurbita maxima (Rimu)cmawmbB139
Cla97C06G123070Cucurbita maxima (Rimu)cmawmbB188
Cla97C06G123070Cucurbita maxima (Rimu)cmawmbB823
Cla97C06G123070Cucurbita moschata (Rifu)cmowmbB070
Cla97C06G123070Cucurbita moschata (Rifu)cmowmbB123
Cla97C06G123070Cucurbita moschata (Rifu)cmowmbB172
Cla97C06G123070Cucurbita moschata (Rifu)cmowmbB795
Cla97C06G123070Wild cucumber (PI 183967)cpiwmbB069
Cla97C06G123070Wild cucumber (PI 183967)cpiwmbB146
Cla97C06G123070Cucumber (Chinese Long) v3cucwmbB064
Cla97C06G123070Cucumber (Chinese Long) v3cucwmbB144
Cla97C06G123070Cucumber (Chinese Long) v2cuwmbB065
Cla97C06G123070Cucumber (Chinese Long) v2cuwmbB144
Cla97C06G123070Bottle gourd (USVL1VR-Ls)lsiwmbB095
Cla97C06G123070Bottle gourd (USVL1VR-Ls)lsiwmbB374
Cla97C06G123070Melon (DHL92) v3.6.1medwmbB247
Cla97C06G123070Melon (DHL92) v3.6.1medwmbB388
Cla97C06G123070Melon (DHL92) v3.5.1mewmbB261
Cla97C06G123070Melon (DHL92) v3.5.1mewmbB399
Cla97C06G123070Watermelon (Charleston Gray)wcgwmbB078
Cla97C06G123070Watermelon (97103) v1wmwmbB377
Cla97C06G123070Wax gourdwgowmbB655