Cla97C06G122510 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G122510
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	F-box protein PP2-B1
Location	Cla97Chr06 : 24838616 .. 24839026 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCATCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGTTAGTCGTGATCCTGCATAG

mRNA sequence

ATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCATCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGTTAGTCGTGATCCTGCATAG

Coding sequence (CDS)

ATGTTGTGTCCTGCAACAACTTATGTAGCTTACTTTGTGTTTAAGATGAATGAACGTAGATATTATGGGTTCGATATAGTTGCTGCTGATGAAACGGTGGCAATTGTTGGTGGAGAATGCTGCTCAAGTAGAGTTTGTATGGATCCTTTTTTGGACAATGCTCCATCGAAGCGCCGCCGCCGTATTACGTGTTTGAGAAGGAATCCACTCGGCAATAGCATGTCAAGGGCAAAACAGCCACAGGAGAGGCATGATGGTTGGTTTGAAATCGAGTTGGGAGAGCTTCGCAATAATGTTGGAGATGATGAAGTTGAGTTCTTTCTTAAGGAGGTTAATTGCAATTATTCTAAGAGTGGTCTCATTGTTCAAGGGATAGACATTAGGCCTAAAGTTAGTCGTGATCCTGCATAG

Protein sequence

MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGLIVQGIDIRPKVSRDPA

Homology

[Close]

BLAST of Cla97C06G122510 vs. NCBI nr
Match: XP_004146303.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis sativus] >KGN65429.1 hypothetical protein Csa_1G421890 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 5.5e-64
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV GECCSSRVC+DPFL+NAP KRRR
Sbjct: 164 MLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLENAPPKRRR 223

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
           R  CLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN GDD VEFFLKEVNCNYSKSGL
Sbjct: 224 RTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSKSGL 283

Query: 121 IVQGIDIRPKVSRDPA 137
           IVQGIDIRPKVSRD A
Sbjct: 284 IVQGIDIRPKVSRDLA 299

[Close]

BLAST of Cla97C06G122510 vs. NCBI nr
Match: XP_008453631.1 (PREDICTED: F-box protein PP2-B10-like [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-61
Identity = 119/136 (87.50%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV GECCSSRVC+DPFLD AP K RR
Sbjct: 164 MLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK-RR 223

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
           R  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NN GDDEVEFFLKEVNCNYSKSGL
Sbjct: 224 RTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSKSGL 283

Query: 121 IVQGIDIRPKVSRDPA 137
           IVQGIDIRPK+SRD A
Sbjct: 284 IVQGIDIRPKISRDLA 298

[Close]

BLAST of Cla97C06G122510 vs. NCBI nr
Match: XP_022929404.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 89/147 (60.54%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML  ATTY AYFVFKMNE RYYGFDIV AD  V IVGGECC+  V +DP+LDN+  KR+R
Sbjct: 163 MLSAATTYAAYFVFKMNE-RYYGFDIVPADAKVGIVGGECCTISVGLDPYLDNSQRKRQR 222

Query: 61  RI---------------TCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVE 120
            +                    +  G +MSR   P+ERHDGWFEIE+GE  NN GDDEVE
Sbjct: 223 LVWMGSXXXXXXXXXXXXXXXTHTPGINMSRMALPKERHDGWFEIEMGEFHNNGGDDEVE 282

Query: 121 FFLKEVNCNYSKSGLIVQGIDIRPKVS 133
             LKEVNCNYSK GLIVQGI+IRPK S
Sbjct: 283 MVLKEVNCNYSKCGLIVQGIEIRPKNS 308

[Close]

BLAST of Cla97C06G122510 vs. NCBI nr
Match: XP_023530000.1 (F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 3.0e-38
Identity = 88/147 (59.86%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML  ATTY AYFVFKMNE RYYGFDIV AD  V IVGG+CC+  V +DP+LDN+  KR+R
Sbjct: 163 MLSAATTYAAYFVFKMNE-RYYGFDIVPADAKVGIVGGDCCTISVGLDPYLDNSQRKRQR 222

Query: 61  RI---------------TCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVE 120
            +                    +  G +MSR   P+ERHDGWFEIE+GE  NN GDDEVE
Sbjct: 223 LVWMGSXXXXXXXXXXXXXXXTHTPGINMSRMALPKERHDGWFEIEMGEFHNNGGDDEVE 282

Query: 121 FFLKEVNCNYSKSGLIVQGIDIRPKVS 133
             LKEVNCNYSK GLIVQGI+IRPK S
Sbjct: 283 MVLKEVNCNYSKCGLIVQGIEIRPKKS 308

[Close]

BLAST of Cla97C06G122510 vs. NCBI nr
Match: XP_023001964.1 (F-box protein PP2-B10-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 88/147 (59.86%), Postives = 98/147 (66.67%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML  ATTY AYFVFKMNE RYYGFDIV AD  V IVGGECC+  V +DP+LDN+  KR+R
Sbjct: 163 MLSAATTYAAYFVFKMNE-RYYGFDIVPADAKVGIVGGECCTISVGLDPYLDNSQRKRQR 222

Query: 61  RI---------------TCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVE 120
            +                       G +MS    P+ERHDGWFEIE+GE  NN GDDEVE
Sbjct: 223 LVWMGSXXXXXXXXXXXXXXXXXAPGINMSGMALPKERHDGWFEIEMGEFHNNGGDDEVE 282

Query: 121 FFLKEVNCNYSKSGLIVQGIDIRPKVS 133
             LKEVNCNYSK GLIVQGI+IRPK S
Sbjct: 283 MVLKEVNCNYSKCGLIVQGIEIRPKKS 308

[Close]

BLAST of Cla97C06G122510 vs. TrEMBL
Match: tr|A0A0A0LWS1|A0A0A0LWS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64
Identity = 122/136 (89.71%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV GECCSSRVC+DPFL+NAP KRRR
Sbjct: 164 MLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLENAPPKRRR 223

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
           R  CLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNN GDD VEFFLKEVNCNYSKSGL
Sbjct: 224 RTPCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNGGDDVVEFFLKEVNCNYSKSGL 283

Query: 121 IVQGIDIRPKVSRDPA 137
           IVQGIDIRPKVSRD A
Sbjct: 284 IVQGIDIRPKVSRDLA 299

[Close]

BLAST of Cla97C06G122510 vs. TrEMBL
Match: tr|A0A1S3BWT7|A0A1S3BWT7_CUCME (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61
Identity = 119/136 (87.50%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML PATTY AYFVFKM+ERRYYGFDIVAAD  VAIV GECCSSRVC+DPFLD AP K RR
Sbjct: 164 MLSPATTYAAYFVFKMDERRYYGFDIVAADAAVAIVDGECCSSRVCLDPFLDIAPPK-RR 223

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
           R  CLRRNPLGNSMSRAKQPQERHDGWFE+ELGEL NN GDDEVEFFLKEVNCNYSKSGL
Sbjct: 224 RTPCLRRNPLGNSMSRAKQPQERHDGWFELELGELHNNGGDDEVEFFLKEVNCNYSKSGL 283

Query: 121 IVQGIDIRPKVSRDPA 137
           IVQGIDIRPK+SRD A
Sbjct: 284 IVQGIDIRPKISRDLA 298

[Close]

BLAST of Cla97C06G122510 vs. TrEMBL
Match: tr|A0A1S4DZG4|A0A1S4DZG4_CUCME (F-box protein PP2-B10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494286 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-31
Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P TTY AY VFKM ERRY+GF+I   D  V IVG E     VC+DP+LD+ P +RRR
Sbjct: 161 LLSPTTTYAAYIVFKMRERRYFGFNIDFVDAMVGIVGSEHSVKTVCLDPYLDD-PLQRRR 220

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
            +     N   N+MSR ++P+ R D WFE ELGE  N  GDDEVE  LK++ C  SK+ L
Sbjct: 221 HVPQAGSNLTTNNMSRLEEPRGRDDDWFETELGEFDNKGGDDEVEIILKDLKCTDSKNSL 280

Query: 121 IVQGIDIRPKVSRD 135
           +VQGI+IRPK++ D
Sbjct: 281 VVQGIEIRPKINPD 293

[Close]

BLAST of Cla97C06G122510 vs. TrEMBL
Match: tr|A0A1S4DZH9|A0A1S4DZH9_CUCME (F-box protein PP2-B10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494286 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-31
Identity = 71/134 (52.99%), Postives = 90/134 (67.16%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P TTY AY VFKM ERRY+GF+I   D  V IVG E     VC+DP+LD+ P +RRR
Sbjct: 156 LLSPTTTYAAYIVFKMRERRYFGFNIDFVDAMVGIVGSEHSVKTVCLDPYLDD-PLQRRR 215

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
            +     N   N+MSR ++P+ R D WFE ELGE  N  GDDEVE  LK++ C  SK+ L
Sbjct: 216 HVPQAGSNLTTNNMSRLEEPRGRDDDWFETELGEFDNKGGDDEVEIILKDLKCTDSKNSL 275

Query: 121 IVQGIDIRPKVSRD 135
           +VQGI+IRPK++ D
Sbjct: 276 VVQGIEIRPKINPD 288

[Close]

BLAST of Cla97C06G122510 vs. TrEMBL
Match: tr|A0A0A0LU29|A0A0A0LU29_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421900 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.9e-31
Identity = 71/132 (53.79%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           ML P TTY AY VFKM ERRY+GF+I   D  V IVG E     VC+DP+LD+ P +RRR
Sbjct: 161 MLSPRTTYAAYIVFKMRERRYFGFNIDFVDAMVGIVGSEHSVKTVCLDPYLDD-PLQRRR 220

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
            +     N   N++S  + P+ RHD WFE ELGE  NN GDDEVE  LK++ C  SK+ L
Sbjct: 221 HVPQAGSNLPTNNISGLEMPKGRHDDWFETELGEFDNNGGDDEVEIILKDLRCTDSKNSL 280

Query: 121 IVQGIDIRPKVS 133
           +VQGI+IRPK++
Sbjct: 281 VVQGIEIRPKIN 291

[Close]

BLAST of Cla97C06G122510 vs. Swiss-Prot
Match: sp|Q9ZVQ8|PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-13
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVG---GECCSSRVCMDPFLDNAPSK 60
           ++ P T Y AY V+K      YGF+ VA +  V +VG    E C   +C D  +D     
Sbjct: 181 VISPKTRYSAYIVYK-KLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQ--- 240

Query: 61  RRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVG---DDEVEFFLKEVNCN 120
                   RR   G ++ +   P+ R DGW EI++GE  N  G   DDE+E    E    
Sbjct: 241 -------FRRRDRGKNLVK---PERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQR 300

Query: 121 YSKSGLIVQGIDIRP 130
           + K GLI+QGI+IRP
Sbjct: 301 HWKRGLIIQGIEIRP 301

[Close]

BLAST of Cla97C06G122510 vs. Swiss-Prot
Match: sp|Q9ZVQ6|P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-12
Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P T Y AY VFK    + YGF  VA +  V +VG E     +C       A  + RR
Sbjct: 157 VLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVVGQEPSRRLIC----FSEAIRRGRR 216

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVG---DDEVEFFLKEVNCNYSK 120
            +                +P++R DGW EIELGE  N+ G   +DE+E    E      K
Sbjct: 217 NVV---------------KPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRK 268

Query: 121 SGLIVQGIDIRP 130
            GLI+QGI+IRP
Sbjct: 277 CGLIIQGIEIRP 268

[Close]

BLAST of Cla97C06G122510 vs. Swiss-Prot
Match: sp|O80494|P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 3.7e-11
Identity = 46/136 (33.82%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 2   LCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRRR 61
           L P T Y AY + K+  R  YG D+V A+ ++ +  GE       +   LDN   +  R 
Sbjct: 147 LSPNTNYGAYLIMKVTSRA-YGLDLVPAETSIKVGNGEKKIKSTYLS-CLDNKKQQMERV 206

Query: 62  ITCLRRNPLGNS---MSRAKQPQERHDGWFEIELGELRNNVG----DDEVEFFLKEVNCN 121
               R   +       S  ++P+ R DGW EIELGE     G    D EV   L EV   
Sbjct: 207 FYGQREQRMATHEVVRSHRREPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEVKGY 266

Query: 122 YSKSGLIVQGIDIRPK 131
             K G+ + GI++RPK
Sbjct: 267 QLKGGIAIDGIEVRPK 280

[Close]

BLAST of Cla97C06G122510 vs. Swiss-Prot
Match: sp|Q3E6P4|FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P T Y AY VFK  + R  G   +  +  + +VG E     +      D    +  R
Sbjct: 204 VLSPGTRYSAYIVFKTKD-RCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETR 263

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
            +T               +P +R DGW E ELGE  N    DE+EF + E+     KSGL
Sbjct: 264 DVT---------------KPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGL 320

Query: 121 IVQGIDIRPKVSR 134
           I+QGI+ RP  S+
Sbjct: 324 IIQGIEFRPTKSQ 320

[Close]

BLAST of Cla97C06G122510 vs. Swiss-Prot
Match: sp|Q9ZVQ9|PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-10
Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 0


Query: 2   LCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRRR 61
           L P T Y  Y VF +     YGF  VA +  V +VG E                S+  RR
Sbjct: 182 LSPRTRYSVYIVF-LKADICYGFAYVAMEAVVRMVGHEL---------------SESCRR 241

Query: 62  ITCLRRNPLGNSMSRAK--QPQERHDGWFEIELGELRNN---VGDDEVEFFLKEVNCNYS 121
             C         ++R     P+ R DGW EIE+GE  N      +DE+E  + E     +
Sbjct: 242 YVCFHEAMEWQFLTRKNLVNPERREDGWMEIEIGEFFNEGAFRNNDEIEMSVSETTQRNT 298

Query: 122 KSGLIVQGIDIRP 130
           K GLI+QGI+IRP
Sbjct: 302 KRGLIIQGIEIRP 298

[Close]

BLAST of Cla97C06G122510 vs. TAIR10
Match: AT2G02340.1 (phloem protein 2-B8)

HSP 1 Score: 77.0 bits (188), Expect = 9.8e-15
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVG---GECCSSRVCMDPFLDNAPSK 60
           ++ P T Y AY V+K      YGF+ VA +  V +VG    E C   +C D  +D     
Sbjct: 181 VISPKTRYSAYIVYK-KLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQ--- 240

Query: 61  RRRRITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVG---DDEVEFFLKEVNCN 120
                   RR   G ++ +   P+ R DGW EI++GE  N  G   DDE+E    E    
Sbjct: 241 -------FRRRDRGKNLVK---PERRKDGWMEIKIGEFFNEGGLLNDDEIEMVALEAKQR 300

Query: 121 YSKSGLIVQGIDIRP 130
           + K GLI+QGI+IRP
Sbjct: 301 HWKRGLIIQGIEIRP 301

[Close]

BLAST of Cla97C06G122510 vs. TAIR10
Match: AT2G02360.1 (phloem protein 2-B10)

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-13
Identity = 49/132 (37.12%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P T Y AY VFK    + YGF  VA +  V +VG E     +C       A  + RR
Sbjct: 157 VLSPRTRYSAYIVFK-GVDKCYGFQNVAIEAAVGVVGQEPSRRLIC----FSEAIRRGRR 216

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVG---DDEVEFFLKEVNCNYSK 120
            +                +P++R DGW EIELGE  N+ G   +DE+E    E      K
Sbjct: 217 NVV---------------KPKQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRK 268

Query: 121 SGLIVQGIDIRP 130
            GLI+QGI+IRP
Sbjct: 277 CGLIIQGIEIRP 268

[Close]

BLAST of Cla97C06G122510 vs. TAIR10
Match: AT1G09155.1 (phloem protein 2-B15)

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12
Identity = 46/136 (33.82%), Postives = 63/136 (46.32%), Query Frame = 0


Query: 2   LCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRRR 61
           L P T Y AY + K+  R  YG D+V A+ ++ +  GE       +   LDN   +  R 
Sbjct: 147 LSPNTNYGAYLIMKVTSRA-YGLDLVPAETSIKVGNGEKKIKSTYLS-CLDNKKQQMERV 206

Query: 62  ITCLRRNPLGNS---MSRAKQPQERHDGWFEIELGELRNNVG----DDEVEFFLKEVNCN 121
               R   +       S  ++P+ R DGW EIELGE     G    D EV   L EV   
Sbjct: 207 FYGQREQRMATHEVVRSHRREPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEVKGY 266

Query: 122 YSKSGLIVQGIDIRPK 131
             K G+ + GI++RPK
Sbjct: 267 QLKGGIAIDGIEVRPK 280

[Close]

BLAST of Cla97C06G122510 vs. TAIR10
Match: AT2G02240.1 (F-box family protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 44/133 (33.08%), Postives = 61/133 (45.86%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L P T Y AY VFK  + R  G   +  +  + +VG E     +      D    +  R
Sbjct: 204 VLSPGTRYSAYIVFKTKD-RCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETR 263

Query: 61  RITCLRRNPLGNSMSRAKQPQERHDGWFEIELGELRNNVGDDEVEFFLKEVNCNYSKSGL 120
            +T               +P +R DGW E ELGE  N    DE+EF + E+     KSGL
Sbjct: 264 DVT---------------KPDQREDGWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGL 320

Query: 121 IVQGIDIRPKVSR 134
           I+QGI+ RP  S+
Sbjct: 324 IIQGIEFRPTKSQ 320

[Close]

BLAST of Cla97C06G122510 vs. TAIR10
Match: AT1G56250.1 (phloem protein 2-B14)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11
Identity = 43/137 (31.39%), Postives = 67/137 (48.91%), Query Frame = 0


Query: 1   MLCPATTYVAYFVFKMNERRYYGFDIVAADETVAIVGGECCSSRVCMDPFLDNAPSKRRR 60
           +L   T Y AY + K+  +  YG D+V A+ ++    G+   S   +   LD    + +R
Sbjct: 147 VLSANTRYGAYLIVKVT-KGAYGLDLVPAETSIKSKNGQISKSATYL-CCLDEKKQQMKR 206

Query: 61  RITCLRRNPLGNSM------SRAKQPQERHDGWFEIELGELRNNVG-DDEVEFFLKEVNC 120
                R   +  ++       + ++P+ R DGW EIELGE     G DDEV   L EV  
Sbjct: 207 LFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIELGEFETREGEDDEVNMTLTEVKG 266

Query: 121 NYSKSGLIVQGIDIRPK 131
              K G+++ GI++RPK
Sbjct: 267 YQLKGGILIDGIEVRPK 281

The following BLAST results are available for this feature:

BLAST of Cla97C06G122510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146303.1	5.5e-64	89.71	PREDICTED: F-box protein PP2-B10-like [Cucumis sativus] >KGN65429.1 hypothetical...	[more]
XP_008453631.1	2.0e-61	87.50	PREDICTED: F-box protein PP2-B10-like [Cucumis melo]	[more]
XP_022929404.1	1.8e-38	60.54	F-box protein PP2-B10-like [Cucurbita moschata]	[more]
XP_023530000.1	3.0e-38	59.86	F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001964.1	1.5e-37	59.86	F-box protein PP2-B10-like [Cucurbita maxima]	[more]

BLAST of Cla97C06G122510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWS1\|A0A0A0LWS1_CUCSA	3.6e-64	89.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1	[more]
tr\|A0A1S3BWT7\|A0A1S3BWT7_CUCME	1.3e-61	87.50	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1	[more]
tr\|A0A1S4DZG4\|A0A1S4DZG4_CUCME	3.1e-31	52.99	F-box protein PP2-B10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494286 PE...	[more]
tr\|A0A1S4DZH9\|A0A1S4DZH9_CUCME	3.1e-31	52.99	F-box protein PP2-B10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494286 PE...	[more]
tr\|A0A0A0LU29\|A0A0A0LU29_CUCSA	6.9e-31	53.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G421900 PE=4 SV=1	[more]

BLAST of Cla97C06G122510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZVQ8\|PP2B8_ARATH	1.8e-13	36.30	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
sp\|Q9ZVQ6\|P2B10_ARATH	4.4e-12	37.12	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
sp\|O80494\|P2B15_ARATH	3.7e-11	33.82	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]
sp\|Q3E6P4\|FB95_ARATH	2.4e-10	33.08	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
sp\|Q9ZVQ9\|PP2B7_ARATH	7.0e-10	34.59	F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1	[more]

BLAST of Cla97C06G122510 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02340.1	9.8e-15	36.30	phloem protein 2-B8	[more]
AT2G02360.1	2.4e-13	37.12	phloem protein 2-B10	[more]
AT1G09155.1	2.0e-12	33.82	phloem protein 2-B15	[more]
AT2G02240.1	1.3e-11	33.08	F-box family protein	[more]
AT1G56250.1	3.9e-11	31.39	phloem protein 2-B14	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G122510.1	Cla97C06G122510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 1..129 e-value: 9.6E-22 score: 77.6
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 1..130

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G122510	Cla018805	Watermelon (97103) v1	wmwmbB406
Cla97C06G122510	ClCG06G013180	Watermelon (Charleston Gray)	wcgwmbB273

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G122510	Watermelon (97103) v2	wmbwmbB072
Cla97C06G122510	Watermelon (97103) v2	wmbwmbB073
Cla97C06G122510	Silver-seed gourd	carwmbB0623
Cla97C06G122510	Silver-seed gourd	carwmbB0827
Cla97C06G122510	Cucumber (Gy14) v2	cgybwmbB064
Cla97C06G122510	Cucumber (Gy14) v2	cgybwmbB144
Cla97C06G122510	Cucumber (Gy14) v1	cgywmbB101
Cla97C06G122510	Cucumber (Gy14) v1	cgywmbB105
Cla97C06G122510	Cucurbita maxima (Rimu)	cmawmbB081
Cla97C06G122510	Cucurbita maxima (Rimu)	cmawmbB139
Cla97C06G122510	Cucurbita maxima (Rimu)	cmawmbB827
Cla97C06G122510	Cucurbita moschata (Rifu)	cmowmbB070
Cla97C06G122510	Cucurbita moschata (Rifu)	cmowmbB123
Cla97C06G122510	Cucurbita moschata (Rifu)	cmowmbB799
Cla97C06G122510	Wild cucumber (PI 183967)	cpiwmbB069
Cla97C06G122510	Wild cucumber (PI 183967)	cpiwmbB152
Cla97C06G122510	Cucumber (Chinese Long) v3	cucwmbB064
Cla97C06G122510	Cucumber (Chinese Long) v3	cucwmbB152
Cla97C06G122510	Cucumber (Chinese Long) v2	cuwmbB065
Cla97C06G122510	Cucumber (Chinese Long) v2	cuwmbB150
Cla97C06G122510	Bottle gourd (USVL1VR-Ls)	lsiwmbB095
Cla97C06G122510	Bottle gourd (USVL1VR-Ls)	lsiwmbB098
Cla97C06G122510	Bottle gourd (USVL1VR-Ls)	lsiwmbB376
Cla97C06G122510	Melon (DHL92) v3.6.1	medwmbB247
Cla97C06G122510	Melon (DHL92) v3.5.1	mewmbB261
Cla97C06G122510	Melon (DHL92) v3.5.1	mewmbB393
Cla97C06G122510	Watermelon (Charleston Gray)	wcgwmbB076
Cla97C06G122510	Watermelon (97103) v1	wmwmbB375
Cla97C06G122510	Wax gourd	wgowmbB138
Cla97C06G122510	Wax gourd	wgowmbB655