Cla97C06G119460 (gene) Watermelon (97103) v2

NameCla97C06G119460
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr06 : 19583157 .. 19583441 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGGAACAAGGTTTCTTTCTCCGACAGTGAAGATTTCTTTTATTATCAAAACTCTCATGCCAATGACGAGAATGAGTCTGAAAGGGAGGACCCTGATAGACAGCATCTGGATTCTGATGTTTCAATTAGAGAGTTGGAAGATGGTGACATAGAAGTTAGCCAACAACTTATAGCTACTGATCCGACAGTTAGATGCATAAACAATCTCTTGGGCAAAGTCAATCTTCAGCGTATGGTGGTTCCCTTGAAAGCGCAGGAGCTGGTTGTTCAAGAGAACTAA

mRNA sequence

ATGGAAGGGAACAAGGTTTCTTTCTCCGACAGTGAAGATTTCTTTTATTATCAAAACTCTCATGCCAATGACGAGAATGAGTCTGAAAGGGAGGACCCTGATAGACAGCATCTGGATTCTGATGTTTCAATTAGAGAGTTGGAAGATGGTGACATAGAAGTTAGCCAACAACTTATAGCTACTGATCCGACAGTTAGATGCATAAACAATCTCTTGGGCAAAGTCAATCTTCAGCGTATGGTGGTTCCCTTGAAAGCGCAGGAGCTGGTTGTTCAAGAGAACTAA

Coding sequence (CDS)

ATGGAAGGGAACAAGGTTTCTTTCTCCGACAGTGAAGATTTCTTTTATTATCAAAACTCTCATGCCAATGACGAGAATGAGTCTGAAAGGGAGGACCCTGATAGACAGCATCTGGATTCTGATGTTTCAATTAGAGAGTTGGAAGATGGTGACATAGAAGTTAGCCAACAACTTATAGCTACTGATCCGACAGTTAGATGCATAAACAATCTCTTGGGCAAAGTCAATCTTCAGCGTATGGTGGTTCCCTTGAAAGCGCAGGAGCTGGTTGTTCAAGAGAACTAA

Protein sequence

MEGNKVSFSDSEDFFYYQNSHANDENESEREDPDRQHLDSDVSIRELEDGDIEVSQQLIATDPTVRCINNLLGKVNLQRMVVPLKAQELVVQEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G119460.1Cla97C06G119460.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..40

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G119460ClCG06G010070Watermelon (Charleston Gray)wcgwmbB273
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G119460Silver-seed gourdcarwmbB0775
Cla97C06G119460Cucurbita maxima (Rimu)cmawmbB312
Cla97C06G119460Cucurbita moschata (Rifu)cmowmbB294
Cla97C06G119460Watermelon (97103) v1wmwmbB406
Cla97C06G119460Watermelon (97103) v1wmwmbB410
Cla97C06G119460Wax gourdwgowmbB091