Cla97C06G117650 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G117650
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Cytochrome c biogenesis FN
Location	Cla97Chr06 : 9816302 .. 9817254 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGATAATACGATATGATGACAATGTAGCAGTTTTTATTGATCAAGAAGGAAATCCAAAAGGAACTTGAATATTTGGTGCAACTTCCTAACAATTGAGACAGCTAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAAGATGAGACCATGAGATAGTTATAGTATTTGAATGAAACTAATTAGTAGATTGTGTATCCTTATATACCTTTTTAAATTCATAACTATTTAATAAAAAAGATTGTTGATTTGAGCAAAATTTAAATCTCTTCCTTTAGCTACTCAAAATTTTCAATTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGAAGCTTAGATACGGTTTCTCGATCGAAGATCCATGGCTCACAGACAATATCTCCCCATGGCCTTTCGCCTCTAAAAGTGTCCTTCCTTCTTAATGTGCATGCATCCATCCAATGCATTTTTTCGAATTTGTATTGGCGTTACGTGAATCTCCAACCCAATCTCGAAGAAAAAAAAAGGGATTGCAACTACATTAAAAACCGAGATTCGTCAACATGAACGCACGCTTTGTCATGTTGGTGTGAGAACCTTATATAAACTCAAGATTAAGTTTTTTGATTTGTTTACTCAACTCATAAAGGATACCGTTGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAACAAGCGAGCTTTTTACCCTCAAATTCAAACATGTGGGCGCAAAATGCTATCCTGCTCTATTGTTGCGTAGCAATAGAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCTTCTTTGTTGGACTGTCAGTGCAAAGATCAGTCTCTGA

mRNA sequence

ATGGATACCGTTGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAACAAGCGAGCTTTTTACCCTCAAATTCAAACATGTGGGCGCAAAATGCTATCCTGCTCTATTGTTGCGTAGCAATAGAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCTTCTTTGTTGGACTGTCAGTGCAAAGATCAGTCTCTGA

Coding sequence (CDS)

ATGGATACCGTTGAAAAGAATGGAACGCTGCTTCGCTCTGCTGGATGCGTCGGATCCCGTATAACAAGCGAGCTTTTTACCCTCAAATTCAAACATGTGGGCGCAAAATGCTATCCTGCTCTATTGTTGCGTAGCAATAGAAGCCTGCTCATGCTGCTTCGGCGGCGCTTTTTCGCCTTCTCTTCGCTCTGGACGGGAGGGCTAGTGGACACGGGGAGGGAGCAGGCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCTTCTTTGTTGGACTGTCAGTGCAAAGATCAGTCTCTGA

Protein sequence

MDTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFSSLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSAKISL

Homology

[Close]

BLAST of Cla97C06G117650 vs. NCBI nr
Match: YP_003587247.1 (cytochrome c biogenesis FN [Citrullus lanatus] >ACV96628.1 cytochrome c biogenesis FN (mitochondrion) [Citrullus lanatus])

HSP 1 Score: 188.7 bits (478), Expect = 9.6e-45
Identity = 93/97 (95.88%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 308 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 367

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWT  A
Sbjct: 368 SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTAGA 404

[Close]

BLAST of Cla97C06G117650 vs. NCBI nr
Match: YP_007905715.1 (cytochrome c maturation protein CcmFN (mitochondrion) [Liriodendron tulipifera] >AGJ90412.1 cytochrome c maturation protein CcmFN (mitochondrion) [Liriodendron tulipifera])

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 311 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 370

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG L+DTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 371 SLWTGALMDTGREQAKRVVRNGKKDTTTSPLCWTAGA 407

[Close]

BLAST of Cla97C06G117650 vs. NCBI nr
Match: AGK25079.1 (cytochrome c biogenesis FN, partial (mitochondrion) [Magnolia stellata])

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 297 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 356

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG L+DTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 357 SLWTGALMDTGREQAKRVVRNGKKDTTTSPLCWTAGA 393

[Close]

BLAST of Cla97C06G117650 vs. NCBI nr
Match: ALD61779.1 (cytochrome c maturation protein CcmFN (mitochondrion) [Nicotiana tabacum])

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 89/97 (91.75%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D VEKNGTL RS GCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 298 DAVEKNGTLFRSVGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 357

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG LVDTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 358 SLWTGALVDTGREQAKRVVRNGKKDTTTSPLCWTAGA 394

[Close]

BLAST of Cla97C06G117650 vs. NCBI nr
Match: YP_173394.1 (cytochrome c maturation protein CcmFN [Nicotiana tabacum] >YP_009241427.1 cytochrome c maturation protein CcmFN (mitochondrion) [Nicotiana sylvestris] >YP_009430328.1 cytochrome c maturation subunit FN (mitochondrion) [Nicotiana attenuata] >AMR36208.1 cytochrome c maturation protein CcmFN (mitochondrion) [Nicotiana sylvestris] >ASZ83473.1 cytochrome c maturation subunit FN (mitochondrion) [Nicotiana attenuata])

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 89/97 (91.75%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D VEKNGTL RS GCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 305 DAVEKNGTLFRSVGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 364

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG LVDTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 365 SLWTGALVDTGREQAKRVVRNGKKDTTTSPLCWTAGA 401

[Close]

BLAST of Cla97C06G117650 vs. TrEMBL
Match: tr|D5I3B7|D5I3B7_CITLA (Cytochrome c biogenesis FN OS=Citrullus lanatus OX=3654 GN=ccmFn PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.3e-45
Identity = 93/97 (95.88%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 308 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 367

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWT  A
Sbjct: 368 SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTAGA 404

[Close]

BLAST of Cla97C06G117650 vs. TrEMBL
Match: tr|M9YPZ8|M9YPZ8_MAGST (Cytochrome c biogenesis FN (Fragment) OS=Magnolia stellata OX=54733 GN=ccmFn PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-42
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 297 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 356

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG L+DTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 357 SLWTGALMDTGREQAKRVVRNGKKDTTTSPLCWTAGA 393

[Close]

BLAST of Cla97C06G117650 vs. TrEMBL
Match: tr|M9WBA8|M9WBA8_LIRTU (Cytochrome c maturation protein CcmFN OS=Liriodendron tulipifera OX=3415 GN=ccmFN PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-42
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 311 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 370

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG L+DTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 371 SLWTGALMDTGREQAKRVVRNGKKDTTTSPLCWTAGA 407

[Close]

BLAST of Cla97C06G117650 vs. TrEMBL
Match: tr|A0A0M4JAG1|A0A0M4JAG1_TOBAC (Cytochrome c maturation protein CcmFN OS=Nicotiana tabacum OX=4097 GN=CcmFN PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 89/97 (91.75%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D VEKNGTL RS GCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 298 DAVEKNGTLFRSVGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 357

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG LVDTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 358 SLWTGALVDTGREQAKRVVRNGKKDTTTSPLCWTAGA 394

[Close]

BLAST of Cla97C06G117650 vs. TrEMBL
Match: tr|A0A1S4EUC2|A0A1S4EUC2_TOBAC (cytochrome c maturation protein CcmFN OS=Nicotiana tabacum OX=4097 GN=ccmFN PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 89/97 (91.75%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D VEKNGTL RS GCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS
Sbjct: 305 DAVEKNGTLFRSVGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 364

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG LVDTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 365 SLWTGALVDTGREQAKRVVRNGKKDTTTSPLCWTAGA 401

[Close]

BLAST of Cla97C06G117650 vs. Swiss-Prot
Match: sp|Q04647|CCBS_DAUCA (Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.0e-43
Identity = 86/97 (88.66%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTL RSAGCVGSRITSELFTLKFKHVG KCYPALLLRSNRS LMLLRRRFFA S
Sbjct: 310 DAAEKNGTLFRSAGCVGSRITSELFTLKFKHVGEKCYPALLLRSNRSPLMLLRRRFFALS 369

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
           SLWTG LVDTGREQAKRVVRNGKK+TTTS LCWT  A
Sbjct: 370 SLWTGALVDTGREQAKRVVRNGKKDTTTSPLCWTAGA 406

[Close]

BLAST of Cla97C06G117650 vs. Swiss-Prot
Match: sp|Q04648|CCBS_OENBE (Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 SV=3)

HSP 1 Score: 160.6 bits (405), Expect = 9.1e-39
Identity = 82/97 (84.54%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNG LL SAGCVG RITSELFTLKFK VGAKCYPALLLRSNRS LMLLRRRFFAFS
Sbjct: 308 DAAEKNGRLLCSAGCVGFRITSELFTLKFKDVGAKCYPALLLRSNRSPLMLLRRRFFAFS 367

Query: 62  SLWTGGLVDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
            LWTG LVDTGREQAKRVVRNGKK+T TS L WT  A
Sbjct: 368 LLWTGALVDTGREQAKRVVRNGKKDTATSPLSWTAGA 404

[Close]

BLAST of Cla97C06G117650 vs. Swiss-Prot
Match: sp|Q9T6H8|CCMF1_ARATH (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidopsis thaliana OX=3702 GN=CCMFN1 PE=1 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26
Identity = 59/65 (90.77%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLL SAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRS LMLLRRRFFAFS
Sbjct: 309 DAAEKNGTLLCSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSPLMLLRRRFFAFS 368

Query: 62  SLWTG 67
           S W G
Sbjct: 369 SFWAG 373

[Close]

BLAST of Cla97C06G117650 vs. Swiss-Prot
Match: sp|Q33884|CCMF2_ARATH (Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) OS=Arabidopsis thaliana OX=3702 GN=CCMFN2 PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-07
Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = 0


Query: 69 VDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
          VDTGREQAKRVVRNGKKETTT  LCWT  A
Sbjct: 1  VDTGREQAKRVVRNGKKETTTLPLCWTAGA 30

[Close]

BLAST of Cla97C06G117650 vs. TAIR10
Match: ATMG00830.1 (cytochrome C biogenesis 382)

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-28
Identity = 60/65 (92.31%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 2   DTVEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSLLMLLRRRFFAFS 61
           D  EKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRS LMLLRRRFFAFS
Sbjct: 309 DAAEKNGTLLRSAGCVGSRITSELFTLKFKHVGAKCYPALLLRSNRSPLMLLRRRFFAFS 368

Query: 62  SLWTG 67
           S W G
Sbjct: 369 SFWAG 373

[Close]

BLAST of Cla97C06G117650 vs. TAIR10
Match: ATMG00960.1 (Cytochrome C assembly protein)

HSP 1 Score: 58.2 bits (139), Expect = 3.5e-09
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0


Query: 69 VDTGREQAKRVVRNGKKETTTSLLCWTVSA 99
          VDTGREQAKRVVRNGKKETTTS LCWT  A
Sbjct: 1  VDTGREQAKRVVRNGKKETTTSPLCWTAGA 30

The following BLAST results are available for this feature:

BLAST of Cla97C06G117650 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_003587247.1	9.6e-45	95.88	cytochrome c biogenesis FN [Citrullus lanatus] >ACV96628.1 cytochrome c biogenes...	[more]
YP_007905715.1	1.5e-42	91.75	cytochrome c maturation protein CcmFN (mitochondrion) [Liriodendron tulipifera] ...	[more]
AGK25079.1	1.5e-42	91.75	cytochrome c biogenesis FN, partial (mitochondrion) [Magnolia stellata]	[more]
ALD61779.1	2.0e-42	91.75	cytochrome c maturation protein CcmFN (mitochondrion) [Nicotiana tabacum]	[more]
YP_173394.1	2.0e-42	91.75	cytochrome c maturation protein CcmFN [Nicotiana tabacum] >YP_009241427.1 cytoch...	[more]

BLAST of Cla97C06G117650 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|D5I3B7\|D5I3B7_CITLA	6.3e-45	95.88	Cytochrome c biogenesis FN OS=Citrullus lanatus OX=3654 GN=ccmFn PE=4 SV=1	[more]
tr\|M9YPZ8\|M9YPZ8_MAGST	1.0e-42	91.75	Cytochrome c biogenesis FN (Fragment) OS=Magnolia stellata OX=54733 GN=ccmFn PE=...	[more]
tr\|M9WBA8\|M9WBA8_LIRTU	1.0e-42	91.75	Cytochrome c maturation protein CcmFN OS=Liriodendron tulipifera OX=3415 GN=ccmF...	[more]
tr\|A0A0M4JAG1\|A0A0M4JAG1_TOBAC	1.3e-42	91.75	Cytochrome c maturation protein CcmFN OS=Nicotiana tabacum OX=4097 GN=CcmFN PE=4...	[more]
tr\|A0A1S4EUC2\|A0A1S4EUC2_TOBAC	1.3e-42	91.75	cytochrome c maturation protein CcmFN OS=Nicotiana tabacum OX=4097 GN=ccmFN PE=4...	[more]

BLAST of Cla97C06G117650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q04647\|CCBS_DAUCA	8.0e-43	88.66	Probable cytochrome c biosynthesis protein OS=Daucus carota OX=4039 PE=2 SV=1	[more]
sp\|Q04648\|CCBS_OENBE	9.1e-39	84.54	Probable cytochrome c biosynthesis protein OS=Oenothera berteroana OX=3950 PE=2 ...	[more]
sp\|Q9T6H8\|CCMF1_ARATH	1.8e-26	90.77	Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 1 OS=Arabidop...	[more]
sp\|Q33884\|CCMF2_ARATH	3.2e-07	86.67	Cytochrome c biogenesis CcmF N-terminal-like mitochondrial protein 2 (Fragment) ...	[more]

BLAST of Cla97C06G117650 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00830.1	1.2e-28	92.31	cytochrome C biogenesis 382	[more]
ATMG00960.1	3.5e-09	90.00	Cytochrome C assembly protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0020037	heme binding
molecular_function	GO:0015232	heme transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G117650.1	Cla97C06G117650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR30009:SF23	CYTOCHROME C BIOGENESIS CCMF N-TERMINAL-LIKE MITOCHONDRIAL PROTEIN 1	coord: 2..67
None	No IPR available	PANTHER	PTHR30009	CYTOCHROME C-TYPE SYNTHESIS PROTEIN AND PTS TRANSMEMBRANE COMPONENT	coord: 2..67

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G117650	Watermelon (97103) v2	wmbwmbB137
Cla97C06G117650	Silver-seed gourd	carwmbB0230
Cla97C06G117650	Silver-seed gourd	carwmbB1009
Cla97C06G117650	Silver-seed gourd	carwmbB1133
Cla97C06G117650	Silver-seed gourd	carwmbB1136
Cla97C06G117650	Cucumber (Gy14) v2	cgybwmbB135
Cla97C06G117650	Cucumber (Gy14) v2	cgybwmbB222
Cla97C06G117650	Cucumber (Gy14) v1	cgywmbB358
Cla97C06G117650	Cucumber (Gy14) v1	cgywmbB453
Cla97C06G117650	Cucurbita maxima (Rimu)	cmawmbB266
Cla97C06G117650	Cucurbita maxima (Rimu)	cmawmbB377
Cla97C06G117650	Cucurbita maxima (Rimu)	cmawmbB865
Cla97C06G117650	Cucurbita maxima (Rimu)	cmawmbB919
Cla97C06G117650	Cucurbita maxima (Rimu)	cmawmbB921
Cla97C06G117650	Cucurbita moschata (Rifu)	cmowmbB246
Cla97C06G117650	Cucurbita moschata (Rifu)	cmowmbB361
Cla97C06G117650	Cucurbita moschata (Rifu)	cmowmbB837
Cla97C06G117650	Cucurbita moschata (Rifu)	cmowmbB896
Cla97C06G117650	Cucurbita moschata (Rifu)	cmowmbB893
Cla97C06G117650	Wild cucumber (PI 183967)	cpiwmbB144
Cla97C06G117650	Wild cucumber (PI 183967)	cpiwmbB239
Cla97C06G117650	Cucumber (Chinese Long) v3	cucwmbB142
Cla97C06G117650	Cucumber (Chinese Long) v3	cucwmbB233
Cla97C06G117650	Cucumber (Chinese Long) v2	cuwmbB141
Cla97C06G117650	Cucumber (Chinese Long) v2	cuwmbB231
Cla97C06G117650	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G117650	Bottle gourd (USVL1VR-Ls)	lsiwmbB341
Cla97C06G117650	Melon (DHL92) v3.6.1	medwmbB378
Cla97C06G117650	Melon (DHL92) v3.6.1	medwmbB442
Cla97C06G117650	Melon (DHL92) v3.5.1	mewmbB388
Cla97C06G117650	Melon (DHL92) v3.5.1	mewmbB448
Cla97C06G117650	Watermelon (Charleston Gray)	wcgwmbB237
Cla97C06G117650	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G117650	Watermelon (97103) v1	wmwmbB217
Cla97C06G117650	Watermelon (97103) v1	wmwmbB406
Cla97C06G117650	Wax gourd	wgowmbB097
Cla97C06G117650	Wax gourd	wgowmbB206