Cla97C06G117310 (gene) Watermelon (97103) v2

Overview
NameCla97C06G117310
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionlate embryogenesis abundant protein 2-like
LocationCla97Chr06 : 9024080 .. 9025786 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAAGTCAGTATATACTTATCCATATATTTTCTTATTCTTCTTCTTTATCGTTCTTTCATCAATCAATTTGTGCTTTCAGATTTGTTATCAATATTAGTGAAAATCATCTCTTAATTTTATTTTCTTTTGTATTTTGATTTTCTGGGTTTTAGTGATTTTCTTATTGTGATGCCTTTGGCTATAGTGATTCTTTCCTTAGGTCGAATTAATATTTTTTTTTTTTTTTTTTTTTTTTTTAAAAACTTGTGAATGCTTTATCTTGGATTGCAAAATTTTATTTTCTTTGTCTTTTCATTCTTCTTGGACCAAATGAGGTTTGATTAAATAAAAAGATATGTGTAGATATGTGTTTAAATCATATGAATTTTTGGATGTATTGAGAGTTTTGTAATTGATAAGAAAAATGTTTGGAAATGGCAGTCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTAAGCCAATTAATTCAAGATTCAATCTCCCCTTTCACTTATATTTATTTCATTCTATTTAAATTGAAATATCAATGAATCTTATAAATTAAAAAACCTTCCAAAAGGGTTTGGTTTAAAGTATGGGTTCCATCTCAAAATCAATTGACAAATGGGAGAAGAAATCTATTTATGTTAAAAAGTGATTTGAACTAGTAATTTAGTGGGGGTTAAATAAAATTAGTACTATTTATTCAAAATTAAATAAATGTTTAATTTTCATTTTAAAACACAGTTTTTACACTATTAAGATTGATTCTAATGATTTTGAAAATGAGAATAGTGATTTTAAACAATTCCCAAACATGCTCTCATCATTTTTTTTTTCATCACACCTGTAAAAGTGATTTTGATTTTGAATATTCATTAATGTTTGATTTTTATAATGGTTTTAGAATCATCAAATTACTAAATTAGATCTCTCAAATAATGGTTATTATCATTGAGATACCTCACAATCCTTATCAAATACATGGGTTGACCCTTTTGGAGGGAATTTCATGTCTATCAGATATGGAATTAGAGACAACAAATCTAAAGGTAGTTAAAAACTAACATTAATAAACTAACCAAAGAGGTATCTTCAAGGGACATTATGAAGATTACAAATATGTTTTACCCACATTTGTTCGTTTTCTTTATTTGTAAGTTCAACCAATGCATAACTGAGATATGAAACTATGGACACTGGAGAGATGATGATTTGATGATGATTTGTGTCTTATATATCCATTCACTTATGCATTAGTTTGTCTGTTTTAGACTTTTTTGGTTGGTTGGGATTTGACATTTTGAGAAATTTAATTGGAGGTATGATGTGATTTATAGGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

mRNA sequence

ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAATCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

Coding sequence (CDS)

ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAATCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

Protein sequence

MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK
Homology
[Close]
BLAST of Cla97C06G117310 vs. NCBI nr
Match: XP_022138632.1 (uncharacterized protein LOC111009748 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 3.7e-07
Identity = 37/54 (68.52%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 1  MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACI 54
          MSTLKHTAKLS +    L    SN + G KAFISSYPTLSKSK  DEETVDAC+
Sbjct: 1  MSTLKHTAKLSKY----LFTPKSNASFGHKAFISSYPTLSKSKTTDEETVDACV 50

The following BLAST results are available for this feature:
BLAST of Cla97C06G117310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022138632.13.7e-0768.52uncharacterized protein LOC111009748 [Momordica charantia][more]
BLAST of Cla97C06G117310 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Cla97C06G117310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C06G117310 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G117310.1Cla97C06G117310.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C06G117310Bhi12G001331Wax gourdwgowmbB097
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G117310Watermelon (97103) v2wmbwmbB137
Cla97C06G117310Watermelon (97103) v2wmbwmbB156
Cla97C06G117310Silver-seed gourdcarwmbB0230
Cla97C06G117310Silver-seed gourdcarwmbB0237
Cla97C06G117310Silver-seed gourdcarwmbB0819
Cla97C06G117310Silver-seed gourdcarwmbB1009
Cla97C06G117310Silver-seed gourdcarwmbB1133
Cla97C06G117310Cucumber (Gy14) v2cgybwmbB141
Cla97C06G117310Cucumber (Gy14) v2cgybwmbB219
Cla97C06G117310Cucumber (Gy14) v2cgybwmbB222
Cla97C06G117310Cucumber (Gy14) v1cgywmbB453
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB266
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB539
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB653
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB865
Cla97C06G117310Cucurbita maxima (Rimu)cmawmbB921
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB246
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB361
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB520
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB627
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB837
Cla97C06G117310Cucurbita moschata (Rifu)cmowmbB896
Cla97C06G117310Wild cucumber (PI 183967)cpiwmbB149
Cla97C06G117310Wild cucumber (PI 183967)cpiwmbB235
Cla97C06G117310Wild cucumber (PI 183967)cpiwmbB239
Cla97C06G117310Cucumber (Chinese Long) v3cucwmbB148
Cla97C06G117310Cucumber (Chinese Long) v3cucwmbB230
Cla97C06G117310Cucumber (Chinese Long) v3cucwmbB233
Cla97C06G117310Cucumber (Chinese Long) v2cuwmbB147
Cla97C06G117310Cucumber (Chinese Long) v2cuwmbB228
Cla97C06G117310Cucumber (Chinese Long) v2cuwmbB231
Cla97C06G117310Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G117310Bottle gourd (USVL1VR-Ls)lsiwmbB341
Cla97C06G117310Melon (DHL92) v3.6.1medwmbB378
Cla97C06G117310Melon (DHL92) v3.6.1medwmbB442
Cla97C06G117310Melon (DHL92) v3.5.1mewmbB388
Cla97C06G117310Melon (DHL92) v3.5.1mewmbB448
Cla97C06G117310Watermelon (Charleston Gray)wcgwmbB237
Cla97C06G117310Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G117310Watermelon (Charleston Gray)wcgwmbB305
Cla97C06G117310Watermelon (97103) v1wmwmbB217
Cla97C06G117310Watermelon (97103) v1wmwmbB406