Cla97C06G116570 (gene) Watermelon (97103) v2

NameCla97C06G116570
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionrepetitive proline-rich cell wall protein 3-like
LocationCla97Chr06 : 7824799 .. 7825077 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTCAAATACTTTCTTCTGCTTCTTCTCGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACACCCCTCGGACTCCAACCAGGAAGTGATTCCGTTGACCGACGAAAGGCTTCCGACCACTACCACCACCAACACCGACCCGGACGAAGAATCCAAGTTCTACAAGAAGCCTTATTACAAGAGGCCTTATTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCGACTAA

mRNA sequence

ATGTTTCTCAAATACTTTCTTCTGCTTCTTCTCGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACACCCCTCGGACTCCAACCAGGAAGTGATTCCGTTGACCGACGAAAGGCTTCCGACCACTACCACCACCAACACCGACCCGGACGAAGAATCCAAGTTCTACAAGAAGCCTTATTACAAGAGGCCTTATTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCGACTAA

Coding sequence (CDS)

ATGTTTCTCAAATACTTTCTTCTGCTTCTTCTCGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACACCCCTCGGACTCCAACCAGGAAGTGATTCCGTTGACCGACGAAAGGCTTCCGACCACTACCACCACCAACACCGACCCGGACGAAGAATCCAAGTTCTACAAGAAGCCTTATTACAAGAGGCCTTATTACAAGAGGCCACCCTACAAGAAGTATCCACCCTACAAGAAACATCCTCCATACAAGAAGTACCCACCATCCTCCGACTAA

Protein sequence

MFLKYFLLLLLAVVLLTTTQALKHPSDSNQEVIPLTDERLPTTTTTNTDPDEESKFYKKPYYKRPYYKRPPYKKYPPYKKHPPYKKYPPSSD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G116570.1Cla97C06G116570.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..81

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G116570Watermelon (97103) v2wmbwmbB137
Cla97C06G116570Watermelon (97103) v2wmbwmbB156
Cla97C06G116570Silver-seed gourdcarwmbB0230
Cla97C06G116570Silver-seed gourdcarwmbB0237
Cla97C06G116570Silver-seed gourdcarwmbB0787
Cla97C06G116570Silver-seed gourdcarwmbB0819
Cla97C06G116570Silver-seed gourdcarwmbB1009
Cla97C06G116570Silver-seed gourdcarwmbB1133
Cla97C06G116570Cucumber (Gy14) v2cgybwmbB141
Cla97C06G116570Cucumber (Gy14) v2cgybwmbB222
Cla97C06G116570Cucumber (Gy14) v1cgywmbB038
Cla97C06G116570Cucumber (Gy14) v1cgywmbB453
Cla97C06G116570Cucumber (Gy14) v1cgywmbB658
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB266
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB539
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB653
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB865
Cla97C06G116570Cucurbita maxima (Rimu)cmawmbB921
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB246
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB361
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB520
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB627
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB837
Cla97C06G116570Cucurbita moschata (Rifu)cmowmbB896
Cla97C06G116570Wild cucumber (PI 183967)cpiwmbB149
Cla97C06G116570Wild cucumber (PI 183967)cpiwmbB239
Cla97C06G116570Wild cucumber (PI 183967)cpiwmbB242
Cla97C06G116570Cucumber (Chinese Long) v3cucwmbB148
Cla97C06G116570Cucumber (Chinese Long) v3cucwmbB233
Cla97C06G116570Cucumber (Chinese Long) v3cucwmbB236
Cla97C06G116570Cucumber (Chinese Long) v2cuwmbB147
Cla97C06G116570Cucumber (Chinese Long) v2cuwmbB231
Cla97C06G116570Cucumber (Chinese Long) v2cuwmbB234
Cla97C06G116570Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G116570Bottle gourd (USVL1VR-Ls)lsiwmbB341
Cla97C06G116570Bottle gourd (USVL1VR-Ls)lsiwmbB342
Cla97C06G116570Melon (DHL92) v3.6.1medwmbB378
Cla97C06G116570Melon (DHL92) v3.6.1medwmbB442
Cla97C06G116570Melon (DHL92) v3.5.1mewmbB388
Cla97C06G116570Melon (DHL92) v3.5.1mewmbB448
Cla97C06G116570Watermelon (Charleston Gray)wcgwmbB237
Cla97C06G116570Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G116570Watermelon (Charleston Gray)wcgwmbB305
Cla97C06G116570Watermelon (97103) v1wmwmbB165
Cla97C06G116570Watermelon (97103) v1wmwmbB217
Cla97C06G116570Watermelon (97103) v1wmwmbB406
Cla97C06G116570Wax gourdwgowmbB095
Cla97C06G116570Wax gourdwgowmbB204
Cla97C06G116570Wax gourdwgowmbB259