Cla97C06G114890 (gene) Watermelon (97103) v2

Overview
NameCla97C06G114890
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr06 : 5785038 .. 5785406 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGGTAATTAACATCTATCAATTTTTCTGCGCTTTTCAATACTGGATTTTGGCATCTCAATTTGTAATTTTTTTATTTTTTTATTTTTTTAATTTCCTTTTAGTCTTTCCTTTTTCATTTTTCATTTTTGTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGATAAACTCCACCTGAAGCTACGCGATTGA

mRNA sequence

ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGATAAACTCCACCTGAAGCTACGCGATTGA

Coding sequence (CDS)

ATGGCGGCGAAGAAGATGATGGCAGTGTTTGTAATGTGCATTCTGGTGGTGGCGGCACTTGAGATATCCACCGTGGCGGCGGGGGAGGAGGCTAAATGTGATGGAAATTGCGGCGGAGTTGGTGGTTCTCCAAATACTACTCCGAGGAAAAAAACATTTTTCAGCCGCATTGCCGATAAACTCCACCTGAAGCTACGCGATTGA

Protein sequence

MAAKKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKLHLKLRD
Homology
[Close]
BLAST of Cla97C06G114890 vs. NCBI nr
Match: KGN47207.1 (hypothetical protein Csa_6G200320 [Cucumis sativus])

HSP 1 Score: 59.7 bits (143), Expect = 4.4e-06
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0 

Query: 4  KKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKL 62
          KKMMAVF++CILV+AALEIS VAAGEEA             N  PRKK+ FSRI DKL
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEA-------------NNIPRKKSLFSRIFDKL 47

[Close]
BLAST of Cla97C06G114890 vs. TrEMBL
Match: tr|A0A0A0KFK4|A0A0A0KFK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-06
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0 

Query: 4  KKMMAVFVMCILVVAALEISTVAAGEEAKCDGNCGGVGGSPNTTPRKKTFFSRIADKL 62
          KKMMAVF++CILV+AALEIS VAAGEEA             N  PRKK+ FSRI DKL
Sbjct: 3  KKMMAVFLLCILVLAALEISAVAAGEEA-------------NNIPRKKSLFSRIFDKL 47

The following BLAST results are available for this feature:
BLAST of Cla97C06G114890 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47207.14.4e-0662.07hypothetical protein Csa_6G200320 [Cucumis sativus][more]
BLAST of Cla97C06G114890 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFK4|A0A0A0KFK4_CUCSA2.9e-0662.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1[more]
BLAST of Cla97C06G114890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C06G114890 vs. TAIR10
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G114890.1Cla97C06G114890.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G114890Watermelon (97103) v2wmbwmbB137
Cla97C06G114890Watermelon (97103) v2wmbwmbB162
Cla97C06G114890Silver-seed gourdcarwmbB0070
Cla97C06G114890Silver-seed gourdcarwmbB0114
Cla97C06G114890Silver-seed gourdcarwmbB0334
Cla97C06G114890Silver-seed gourdcarwmbB0632
Cla97C06G114890Silver-seed gourdcarwmbB0868
Cla97C06G114890Cucumber (Gy14) v2cgybwmbB222
Cla97C06G114890Cucumber (Gy14) v1cgywmbB453
Cla97C06G114890Cucurbita maxima (Rimu)cmawmbB266
Cla97C06G114890Cucurbita maxima (Rimu)cmawmbB374
Cla97C06G114890Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G114890Cucurbita maxima (Rimu)cmawmbB865
Cla97C06G114890Cucurbita maxima (Rimu)cmawmbB921
Cla97C06G114890Cucurbita moschata (Rifu)cmowmbB246
Cla97C06G114890Cucurbita moschata (Rifu)cmowmbB359
Cla97C06G114890Cucurbita moschata (Rifu)cmowmbB361
Cla97C06G114890Cucurbita moschata (Rifu)cmowmbB837
Cla97C06G114890Cucurbita moschata (Rifu)cmowmbB896
Cla97C06G114890Wild cucumber (PI 183967)cpiwmbB239
Cla97C06G114890Cucumber (Chinese Long) v3cucwmbB233
Cla97C06G114890Cucumber (Chinese Long) v2cuwmbB231
Cla97C06G114890Bottle gourd (USVL1VR-Ls)lsiwmbB026
Cla97C06G114890Bottle gourd (USVL1VR-Ls)lsiwmbB198
Cla97C06G114890Bottle gourd (USVL1VR-Ls)lsiwmbB344
Cla97C06G114890Melon (DHL92) v3.6.1medwmbB118
Cla97C06G114890Melon (DHL92) v3.6.1medwmbB442
Cla97C06G114890Melon (DHL92) v3.5.1mewmbB128
Cla97C06G114890Melon (DHL92) v3.5.1mewmbB448
Cla97C06G114890Watermelon (Charleston Gray)wcgwmbB026
Cla97C06G114890Watermelon (Charleston Gray)wcgwmbB238
Cla97C06G114890Watermelon (Charleston Gray)wcgwmbB273
Cla97C06G114890Watermelon (97103) v1wmwmbB030
Cla97C06G114890Watermelon (97103) v1wmwmbB217
Cla97C06G114890Watermelon (97103) v1wmwmbB406
Cla97C06G114890Wax gourdwgowmbB087
Cla97C06G114890Wax gourdwgowmbB203