Cla97C06G112960 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTCCTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTTTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGGGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTTGATGTCAGCAACAACCGTTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGATATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTTTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATTGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTTATCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAACTAACTTCACTTTCTCGTTTAATTATTTTGACGGCAAAGATGCAGCATGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAATGGACTGTGGAAACTGTGGTAGTGGTGGTTTAGGTTCTCCCAAAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCACCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGTACCACCAGTTCATTCACCACCACCTCCCGTTCATTCACCACCACCCCCAGTTCATTCCCCACCACCACCAATTCATTCCCCACCACCTCCTGTTAACTCTCCTCCACCACCGGTCCATTCTCCTCCACCACCAGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCGCCAGTCCACTCCCCTCCACCTCCTGTTCACTCCCCACCACCACCTGTCTCTTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCGGTCCACTCCCCACCTCCTCCTATCTACTCTCCACCACCACCGATCCACTACCCACCTCCACCGGTCCACTCCCCACCTCCACCAGTCCATTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCTACTCTCCACCGCCACTGGTCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCTCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA ATGGCTTCTCCTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTTTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGGGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTTGATGTCAGCAACAACCGTTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGATATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTTTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATTGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTTATCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAACTAACTTCACTTTCTCGTTTAATTATTTTGACGGCAAAGATGCAGCATGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAATGGACTGTGGAAACTGTGGTAGTGGTGGTTTAGGTTCTCCCAAAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCACCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGTACCACCAGTTCATTCACCACCACCTCCCGTTCATTCACCACCACCCCCAGTTCATTCCCCACCACCACCAATTCATTCCCCACCACCTCCTGTTAACTCTCCTCCACCACCGGTCCATTCTCCTCCACCACCAGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCGCCAGTCCACTCCCCTCCACCTCCTGTTCACTCCCCACCACCACCTGTCTCTTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCGGTCCACTCCCCACCTCCTCCTATCTACTCTCCACCACCACCGATCCACTACCCACCTCCACCGGTCCACTCCCCACCTCCACCAGTCCATTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCTACTCTCCACCGCCACTGGTCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCTCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA ATGGCTTCTCCTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCTCTTCCTCTTTTTGTCTCTGCCATCTCTCTCCGTCTCCATCTCAGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGGGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTTGATGTCAGCAACAACCGTTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGATATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTTTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATTGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTTATCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAACTAACTTCACTTTCTCGTTTAATTATTTTGACGGCAAAGATGCAGCATGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTAAAGAAATCAATGGACTGTGGAAACTGTGGTAGTGGTGGTTTAGGTTCTCCCAAAGTGCCAATGACTCCTGAGGATCCATTTGATCAATCTCCATCACCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTGAATCGATCGTACCACCAGTTCATTCACCACCACCTCCCGTTCATTCACCACCACCCCCAGTTCATTCCCCACCACCACCAATTCATTCCCCACCACCTCCTGTTAACTCTCCTCCACCACCGGTCCATTCTCCTCCACCACCAGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCGCCAGTCCACTCCCCTCCACCTCCTGTTCACTCCCCACCACCACCTGTCTCTTCTCCTCCACCACCAGTTCACTCCCCACCTCCACCTGTGTACTCTCCACCACCACCGGTCCACTCCCCACCTCCTCCTATCTACTCTCCACCACCACCGATCCACTACCCACCTCCACCGGTCCACTCCCCACCTCCACCAGTCCATTCCCCACCACCACCGGTCCACTCCCCACCTCCACCGGTCTACTCTCCACCGCCACTGGTCTACTCCCCACCACCCCCGGTCCATTCTCCACCAACTCCTGTTTACTCTCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACATCATCCTCCCCCCAAATATCGGCTTCCAATATGCATCACCACCTCCACCACAATTCCCTGGCTACTGA MASPHRKQANHACFLLLFLFLSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMGVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFIGQLPETLSGLQNLEIMDVSNNELRGSVPGGFCKLPKLTNFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSMDCGNCGSGGLGSPKVPMTPEDPFDQSPSPRYRSPPPPVTSPPESIVPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVNSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVYSPPPPVHSPPPPIYSPPPPIHYPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPLVYSPPPPVHSPPTPVYSPPPPVQSPPPPTASPPPDSSPPPSFEDIILPPNIGFQYASPPPPQFPGY
BLAST of Cla97C06G112960 vs. NCBI nr
Match: XP_016902246.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3, partial [Cucumis melo]) HSP 1 Score: 273.1 bits (697), Expect = 2.4e-69 Identity = 332/390 (85.13%), Postives = 352/390 (90.26%), Query Frame = 0
BLAST of Cla97C06G112960 vs. NCBI nr
Match: XP_011656352.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 isoform X1 [Cucumis sativus] >XP_011656353.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.2e-68 Identity = 348/396 (87.88%), Postives = 366/396 (92.42%), Query Frame = 0
BLAST of Cla97C06G112960 vs. NCBI nr
Match: XP_016902247.1 (PREDICTED: LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis melo]) HSP 1 Score: 267.7 bits (683), Expect = 1.0e-67 Identity = 351/394 (89.09%), Postives = 367/394 (93.15%), Query Frame = 0
HSP 2 Score: 54.7 bits (130), Expect = 1.4e-03 Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0
BLAST of Cla97C06G112960 vs. NCBI nr
Match: KGN45680.1 (hypothetical protein Csa_6G006180 [Cucumis sativus]) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66 Identity = 330/394 (83.76%), Postives = 350/394 (88.83%), Query Frame = 0
HSP 2 Score: 50.4 bits (119), Expect = 2.6e-02 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of Cla97C06G112960 vs. NCBI nr
Match: XP_011656354.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis sativus]) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-66 Identity = 330/394 (83.76%), Postives = 350/394 (88.83%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TrEMBL
Match: tr|A0A1S4E1Z4|A0A1S4E1Z4_CUCME (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498004 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 1.6e-69 Identity = 332/390 (85.13%), Postives = 352/390 (90.26%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TrEMBL
Match: tr|A0A1S4E1Z5|A0A1S4E1Z5_CUCME (LOW QUALITY PROTEIN: pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103497703 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 6.8e-68 Identity = 351/394 (89.09%), Postives = 367/394 (93.15%), Query Frame = 0
HSP 2 Score: 54.7 bits (130), Expect = 9.0e-04 Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TrEMBL
Match: tr|A0A0A0K7H4|A0A0A0K7H4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006180 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 7.5e-67 Identity = 330/394 (83.76%), Postives = 350/394 (88.83%), Query Frame = 0
HSP 2 Score: 50.4 bits (119), Expect = 1.7e-02 Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TrEMBL
Match: tr|A0A1S3C8I6|A0A1S3C8I6_CUCME (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103498003 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 2.2e-66 Identity = 325/358 (90.78%), Postives = 339/358 (94.69%), Query Frame = 0
HSP 2 Score: 54.3 bits (129), Expect = 1.2e-03 Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TrEMBL
Match: tr|A0A1S4E2P1|A0A1S4E2P1_CUCME (pollen-specific leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC107991605 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 5.9e-64 Identity = 326/389 (83.80%), Postives = 344/389 (88.43%), Query Frame = 0
BLAST of Cla97C06G112960 vs. Swiss-Prot
Match: sp|Q9LJ64|PLRX1_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.4e-39 Identity = 76/113 (67.26%), Postives = 91/113 (80.53%), Query Frame = 0
HSP 2 Score: 47.0 bits (110), Expect = 9.3e-04 Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0
BLAST of Cla97C06G112960 vs. Swiss-Prot
Match: sp|Q9XIL9|PLRX3_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 3.2e-36 Identity = 266/356 (74.72%), Postives = 305/356 (85.67%), Query Frame = 0
BLAST of Cla97C06G112960 vs. Swiss-Prot
Match: sp|O81765|PLRX4_ARATH (Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 8.1e-32 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Cla97C06G112960 vs. Swiss-Prot
Match: sp|Q9SN46|LRX5_ARATH (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 1.4e-31 Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cla97C06G112960 vs. Swiss-Prot
Match: sp|Q9T0K5|LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 6.8e-31 Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TAIR10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 166.0 bits (419), Expect = 7.6e-41 Identity = 76/113 (67.26%), Postives = 91/113 (80.53%), Query Frame = 0
HSP 2 Score: 47.0 bits (110), Expect = 5.1e-05 Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TAIR10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 154.8 bits (390), Expect = 1.8e-37 Identity = 266/356 (74.72%), Postives = 305/356 (85.67%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TAIR10
Match: AT4G33970.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 140.2 bits (352), Expect = 4.5e-33 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0
HSP 2 Score: 39.3 bits (90), Expect = 1.1e-02 Identity = 16/23 (69.57%), Postives = 18/23 (78.26%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TAIR10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 139.4 bits (350), Expect = 7.6e-33 Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of Cla97C06G112960 vs. TAIR10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein) HSP 1 Score: 137.1 bits (344), Expect = 3.8e-32 Identity = 64/113 (56.64%), Postives = 81/113 (71.68%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |