Cla97C06G112310 (gene) Watermelon (97103) v2

NameCla97C06G112310
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding
LocationCla97Chr06 : 3288176 .. 3289449 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACGAAGCAGGTGTTCCAAATGAGAAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGAAGATGCAGTGGTAATACTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAAAGCGTTCTGGAATGGGGTCGTCGGTGCAGATAATGAAGACGACCCAAACAAGTTTGAAGTTGAAACCGAAGAAGATGCACCAAAGGGACTAGACCCAAACAAAGCTGAACCTGCACTTCCTGAAGATGTAGATGTCCCGAACAGGGGGGAGCTAGAAGCTGTAGCCGCGGCAGCAGAAGCGCCAAACAACGTTGATCCCGGACTTGCAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATATCCCTCCAAACAAGGACGCAGCCGAGGCAGCTGTAGATGGAGCAACCCCAACCAAGGGCGCAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAAGGAGGGCACAAGTGAGCTCCCAGAGGAGGAAGCAGCCCCAAACGAGGGCACAGGTGAGCTCGCAGAGGAGGGACCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAAGAGGGAGCAGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGTAGCCCCAAATGAGGTCCCAGAGGACGGAGCCGCCCCAAACGAGGGCGCAGACGAGTTTCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCAGCTGAGGATGAAGAAATCCCAAAGAAGGAAGAAGCTGGAGTTGCTGAAGAGGAAGGTGCGGCAGTGGAAGCGGCGGGGAGGGAGAAAGCGAAGGAAGGGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAGGAAGAAGAAGAAGCAGGATTGGAGGTTAGATTGGAAAAGGGAGAGGAAGAGGAGGTAGGGTTTGAGGATGAGGAAGATGAAAGAGATAAAGGGGATGATGATGATGATCCGAAGGAGAAGGCGGGGGTGGATCCGAAGGAGAAACCAGTGGTTGAGGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGGGAGAAGGAAGATCCAAACGTGAAACCCGACATCTCGATCGATGGATCTCCGGCGAAAGTGACTGTCAAGTGA

mRNA sequence

ATGCCGACGAAGCAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGAAGATGCAGTGGTAATACTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAAAGCGTTCTGGAATGGGGTCGTCGGTGCAGATAATGAAGACGACCCAAACAAGTTTGAAGTTGAAACCGAAGAAGATGCACCAAAGGGACTAGACCCAAACAAAGCTGAACCTGCACTTCCTGAAGATGTAGATGTCCCGAACAGGGGGGAGCTAGAAGCTGTAGCCGCGGCAGCAGAAGCGCCAAACAACGTTGATCCCGGACTTGCAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATATCCCTCCAAACAAGGACGCAGCCGAGGCAGCTGTAGATGGAGCAACCCCAACCAAGGGCGCAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAAGGAGGGCACAAGTGAGCTCCCAGAGGAGGAAGCAGCCCCAAACGAGGGCACAGGTGAGCTCGCAGAGGAGGGACCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAAGAGGGAGCAGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGTAGCCCCAAATGAGGTCCCAGAGGACGGAGCCGCCCCAAACGAGGGCGCAGACGAGTTTCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCAGCTGAGGATGAAGAAATCCCAAAGAAGGAAGAAGCTGGAGTTGCTGAAGAGGAAGGTGCGGCAGTGGAAGCGGCGGGGAGGGAGAAAGCGAAGGAAGGGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAGGAAGAAGAAGAAGCAGGATTGGAGGTTAGATTGGAAAAGGGAGAGGAAGAGGAGGTAGGGTTTGAGGATGAGGAAGATGAAAGAGATAAAGGGGATGATGATGATGATCCGAAGGAGAAGGCGGGGGTGGATCCGAAGGAGAAACCAGTGGTTGAGGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGGGAGAAGGAAGATCCAAACGTGAAACCCGACATCTCGATCGATGGATCTCCGGCGAAAGTGACTGTCAAGTGA

Coding sequence (CDS)

ATGCCGACGAAGCAGCTCGAGGAACTAGTAGAGGCTGATGTAAGAGAAGAAGAAGAAGATGCAGTGGTAATACTAGTAGTTTTGGACAAAGATGTGGTCGAAAATGAAAACCCAGAAGAAGAAGAAGAAGAAGAAGCCGCAAACGGTGAAGACGAACTCAAATTCTGGGAAGAACTCGAAGAAAAAGCGTTCTGGAATGGGGTCGTCGGTGCAGATAATGAAGACGACCCAAACAAGTTTGAAGTTGAAACCGAAGAAGATGCACCAAAGGGACTAGACCCAAACAAAGCTGAACCTGCACTTCCTGAAGATGTAGATGTCCCGAACAGGGGGGAGCTAGAAGCTGTAGCCGCGGCAGCAGAAGCGCCAAACAACGTTGATCCCGGACTTGCAGTGGATGCAGATGTGCCAAACAATGGTGCACTGGAAGTAGTTGCAGAAGATATCCCTCCAAACAAGGACGCAGCCGAGGCAGCTGTAGATGGAGCAACCCCAACCAAGGGCGCAGATGAGCTCCCAGAGGACGGAAGAGCCCCAAAGGAGGGCACAAGTGAGCTCCCAGAGGAGGAAGCAGCCCCAAACGAGGGCACAGGTGAGCTCGCAGAGGAGGGACCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGCAGCCCCAAACAAGGGCGCAGATGAGCTCCCAGAAGAGGGAGCAGCTCCAAACAAGGGCGCAGATGAGCTCCCAGAGGAGGGAGTAGCCCCAAATGAGGTCCCAGAGGACGGAGCCGCCCCAAACGAGGGCGCAGACGAGTTTCCTGATGAAGATGAAGCCCCAAATCCGAAAGAAGTCAATCCAGCTGAGGATGAAGAAATCCCAAAGAAGGAAGAAGCTGGAGTTGCTGAAGAGGAAGGTGCGGCAGTGGAAGCGGCGGGGAGGGAGAAAGCGAAGGAAGGGGAAGTGGAGGAGGGGAAAGAGGAAGAGCCAAAGCCGAAGGAAGAAGAAGAAGCAGGATTGGAGGTTAGATTGGAAAAGGGAGAGGAAGAGGAGGTAGGGTTTGAGGATGAGGAAGATGAAAGAGATAAAGGGGATGATGATGATGATCCGAAGGAGAAGGCGGGGGTGGATCCGAAGGAGAAACCAGTGGTTGAGGAAAATGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTGGGAGAAGGAAGATCCAAACGTGAAACCCGACATCTCGATCGATGGATCTCCGGCGAAAGTGACTGTCAAGTGA

Protein sequence

MPTKQLEELVEADVREEEEDAVVILVVLDKDVVENENPEEEEEEEAANGEDELKFWEELEEKAFWNGVVGADNEDDPNKFEVETEEDAPKGLDPNKAEPALPEDVDVPNRGELEAVAAAAEAPNNVDPGLAVDADVPNNGALEVVAEDIPPNKDAAEAAVDGATPTKGADELPEDGRAPKEGTSELPEEEAAPNEGTGELAEEGPAPNKGADELPEEGAAPNKGADELPEEGAAPNKGADELPEEGVAPNEVPEDGAAPNEGADEFPDEDEAPNPKEVNPAEDEEIPKKEEAGVAEEEGAAVEAAGREKAKEGEVEEGKEEEPKPKEEEEAGLEVRLEKGEEEEVGFEDEEDERDKGDDDDDPKEKAGVDPKEKPVVEENGEEEEEEEEEEEEDWEKEDPNVKPDISIDGSPAKVTVK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015031 protein transport
biological_process GO:0006810 transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009528 plastid inner membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G112310.1Cla97C06G112310.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 378..398
NoneNo IPR availableCOILSCoilCoilcoord: 30..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..398

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C06G112310Silver-seed gourdcarwmbB0628
Cla97C06G112310Silver-seed gourdcarwmbB0942
Cla97C06G112310Cucumber (Gy14) v2cgybwmbB446
Cla97C06G112310Cucurbita maxima (Rimu)cmawmbB377
Cla97C06G112310Cucurbita maxima (Rimu)cmawmbB917
Cla97C06G112310Cucurbita moschata (Rifu)cmowmbB891
Cla97C06G112310Wild cucumber (PI 183967)cpiwmbB495
Cla97C06G112310Cucumber (Chinese Long) v3cucwmbB487
Cla97C06G112310Cucumber (Chinese Long) v2cuwmbB468
Cla97C06G112310Bottle gourd (USVL1VR-Ls)lsiwmbB024
Cla97C06G112310Watermelon (97103) v1wmwmbB408
Cla97C06G112310Wax gourdwgowmbB094