Cla97C06G110290 (gene) Watermelon (97103) v2

NameCla97C06G110290
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionAmaranthin-like lectin
LocationCla97Chr06 : 940658 .. 941125 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTTCAACTACCAAAGTTCATTGGGCTCAAATCCAACAACTACAACGATAAATACTTACGCTACATCCACGAAGACTCTGAGGCACATGGCTTGCATCAATTCTCCAGCGGTGTCGCGTTGAGCGGCTACGCAAAATTCGAGGTGGAACAGGCAAAGATTGGCAATGGATTGGTCCATATCCGATCCGTGTACAACAACAAATATTGGGTTCGTCGGTCTTCAACTGAATGGTGGATCGCCGCCAATGCAGACGAGCCAGAAGAAGACCAATCCAAATGGACATGCACATTATTCGAACCCGTTCGTGTGAATGACGACGGTCTTACGATTCGCCTCCGCCACGTCCAACTAGGCCACTTTGCATGTCTTTGGCGAGTCCCTCTTCCCTACGAAGCTTGCTTGTATGCAGCATCGGCAAATCACGACCAATCGCTCTTAGACATCTTTCCAATTTTTGATTGA

mRNA sequence

ATGGCTCTTCAACTACCAAAGTTCATTGGGCTCAAATCCAACAACTACAACGATAAATACTTACGCTACATCCACGAAGACTCTGAGGCACATGGCTTGCATCAATTCTCCAGCGGTGTCGCGTTGAGCGGCTACGCAAAATTCGAGGTGGAACAGGCAAAGATTGGCAATGGATTGGTCCATATCCGATCCGTGTACAACAACAAATATTGGGTTCGTCGGTCTTCAACTGAATGGTGGATCGCCGCCAATGCAGACGAGCCAGAAGAAGACCAATCCAAATGGACATGCACATTATTCGAACCCGTTCGTGTGAATGACGACGGTCTTACGATTCGCCTCCGCCACGTCCAACTAGGCCACTTTGCATGTCTTTGGCGAGTCCCTCTTCCCTACGAAGCTTGCTTGTATGCAGCATCGGCAAATCACGACCAATCGCTCTTAGACATCTTTCCAATTTTTGATTGA

Coding sequence (CDS)

ATGGCTCTTCAACTACCAAAGTTCATTGGGCTCAAATCCAACAACTACAACGATAAATACTTACGCTACATCCACGAAGACTCTGAGGCACATGGCTTGCATCAATTCTCCAGCGGTGTCGCGTTGAGCGGCTACGCAAAATTCGAGGTGGAACAGGCAAAGATTGGCAATGGATTGGTCCATATCCGATCCGTGTACAACAACAAATATTGGGTTCGTCGGTCTTCAACTGAATGGTGGATCGCCGCCAATGCAGACGAGCCAGAAGAAGACCAATCCAAATGGACATGCACATTATTCGAACCCGTTCGTGTGAATGACGACGGTCTTACGATTCGCCTCCGCCACGTCCAACTAGGCCACTTTGCATGTCTTTGGCGAGTCCCTCTTCCCTACGAAGCTTGCTTGTATGCAGCATCGGCAAATCACGACCAATCGCTCTTAGACATCTTTCCAATTTTTGATTGA

Protein sequence

MALQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHIRSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHFACLWRVPLPYEACLYAASANHDQSLLDIFPIFD
BLAST of Cla97C06G110290 vs. NCBI nr
Match: XP_004140685.1 (PREDICTED: uncharacterized protein LOC101213433 [Cucumis sativus] >KGN46323.1 hypothetical protein Csa_6G084570 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 2.0e-65
Identity = 114/156 (73.08%), Postives = 136/156 (87.18%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           ++LP+FIGL+  NYN+KYLRYI+ED+EAHGLHQFSS   +SGYAKF+VE+A IGNG VHI
Sbjct: 1   MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRV---NDDGLTIRLRHVQL 122
           RS+YNNKYWVRRS TEWWI ANADEP+E++  WTCTLFEP++V   N+ GLTIRLRHVQL
Sbjct: 61  RSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPIQVDSCNNSGLTIRLRHVQL 120

Query: 123 GHFACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           GHF CLWR+P PYEACL+AAS +HD+S LDIF +FD
Sbjct: 121 GHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFD 156

BLAST of Cla97C06G110290 vs. NCBI nr
Match: XP_008460024.1 (PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 8.5e-61
Identity = 107/155 (69.03%), Postives = 131/155 (84.52%), Query Frame = 0

Query: 4   QLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHIR 63
           +LPKFIGL+  NYN+KYLRY++ED+EAHGL QFSS   +SGYAKF+VE+AK+G G VHIR
Sbjct: 3   ELPKFIGLQCKNYNNKYLRYVYEDNEAHGLQQFSSDTVVSGYAKFQVEKAKMGKGYVHIR 62

Query: 64  SVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRV---NDDGLTIRLRHVQLG 123
           S+YNNKYWVRRS TE+WI ANADEP+E++  WTCTLFEP+ V   N+ GLTIRLRHV L 
Sbjct: 63  SLYNNKYWVRRSPTEFWITANADEPDENEFTWTCTLFEPIPVDGCNNSGLTIRLRHVNLS 122

Query: 124 HFACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           H+ CLWR+P PYEAC++AAS +HD+S LDIF +FD
Sbjct: 123 HYLCLWRIPPPYEACMFAASPDHDESRLDIFTVFD 157

BLAST of Cla97C06G110290 vs. NCBI nr
Match: PSS21691.1 (Natterin-3 like [Actinidia chinensis var. chinensis])

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 96/153 (62.75%), Postives = 112/153 (73.20%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+F+ LKS NYNDKYLRYI+ED + HG  QFS    +S Y K+EVE AK G GLVHI
Sbjct: 1   MALPRFVVLKS-NYNDKYLRYINEDVQVHGFLQFSGEEVVSPYVKYEVEMAKNGKGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR SS+ WWI A ADEPEEDQSKW+CTLFEPV  +D    +R RHVQLGH 
Sbjct: 61  RCCYNNKYWVRWSSSHWWIVAGADEPEEDQSKWSCTLFEPVYADDAKTIVRFRHVQLGHN 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR   P+E+CL+A SA  D+   DI+ I D
Sbjct: 121 ACLWRAAPPHESCLFAGSAQPDKDRCDIYTIID 152

BLAST of Cla97C06G110290 vs. NCBI nr
Match: XP_002264098.1 (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera] >CBI37294.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 91/153 (59.48%), Postives = 115/153 (75.16%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+++ LKS  YNDKYLRYIHED + HG  QFS    ++ Y+K++VE+AK G GLVHI
Sbjct: 1   MALPRYVVLKS-KYNDKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGKGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR S   WWI A ADEP+EDQS W+CTLFEPV V+ +  T+R RHVQLGH+
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR+P PY +CL+A SA+ ++ L D+  I D
Sbjct: 121 ACLWRLPPPYGSCLFAGSASPNKDLCDVCTIID 152

BLAST of Cla97C06G110290 vs. NCBI nr
Match: XP_002264858.1 (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera])

HSP 1 Score: 205.3 bits (521), Expect = 1.5e-49
Identity = 91/153 (59.48%), Postives = 113/153 (73.86%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+++ LKS  YN+KYLRYIHED + HG  QFS    ++ Y+K++VE+AK G GLVHI
Sbjct: 1   MALPRYVVLKS-KYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGGGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR S   WWI A ADEP+EDQS W+CTLFEPV V+ D  T+R RHVQLGH+
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHY 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR+P PY +CL+A S + D  L D+  I D
Sbjct: 121 ACLWRLPPPYGSCLFAGSTSADNDLCDVCTIID 152

BLAST of Cla97C06G110290 vs. TrEMBL
Match: tr|A0A0A0KA14|A0A0A0KA14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084570 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65
Identity = 114/156 (73.08%), Postives = 136/156 (87.18%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           ++LP+FIGL+  NYN+KYLRYI+ED+EAHGLHQFSS   +SGYAKF+VE+A IGNG VHI
Sbjct: 1   MELPEFIGLQCKNYNNKYLRYIYEDNEAHGLHQFSSDTVVSGYAKFKVEKANIGNGYVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRV---NDDGLTIRLRHVQL 122
           RS+YNNKYWVRRS TEWWI ANADEP+E++  WTCTLFEP++V   N+ GLTIRLRHVQL
Sbjct: 61  RSLYNNKYWVRRSPTEWWITANADEPDENECTWTCTLFEPIQVDSCNNSGLTIRLRHVQL 120

Query: 123 GHFACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           GHF CLWR+P PYEACL+AAS +HD+S LDIF +FD
Sbjct: 121 GHFLCLWRIPPPYEACLFAASTDHDESHLDIFTVFD 156

BLAST of Cla97C06G110290 vs. TrEMBL
Match: tr|A0A1S3CB39|A0A1S3CB39_CUCME (uncharacterized protein LOC103498962 OS=Cucumis melo OX=3656 GN=LOC103498962 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.6e-61
Identity = 107/155 (69.03%), Postives = 131/155 (84.52%), Query Frame = 0

Query: 4   QLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHIR 63
           +LPKFIGL+  NYN+KYLRY++ED+EAHGL QFSS   +SGYAKF+VE+AK+G G VHIR
Sbjct: 3   ELPKFIGLQCKNYNNKYLRYVYEDNEAHGLQQFSSDTVVSGYAKFQVEKAKMGKGYVHIR 62

Query: 64  SVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRV---NDDGLTIRLRHVQLG 123
           S+YNNKYWVRRS TE+WI ANADEP+E++  WTCTLFEP+ V   N+ GLTIRLRHV L 
Sbjct: 63  SLYNNKYWVRRSPTEFWITANADEPDENEFTWTCTLFEPIPVDGCNNSGLTIRLRHVNLS 122

Query: 124 HFACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           H+ CLWR+P PYEAC++AAS +HD+S LDIF +FD
Sbjct: 123 HYLCLWRIPPPYEACMFAASPDHDESRLDIFTVFD 157

BLAST of Cla97C06G110290 vs. TrEMBL
Match: tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.5e-50
Identity = 96/153 (62.75%), Postives = 112/153 (73.20%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+F+ LKS NYNDKYLRYI+ED + HG  QFS    +S Y K+EVE AK G GLVHI
Sbjct: 1   MALPRFVVLKS-NYNDKYLRYINEDVQVHGFLQFSGEEVVSPYVKYEVEMAKNGKGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR SS+ WWI A ADEPEEDQSKW+CTLFEPV  +D    +R RHVQLGH 
Sbjct: 61  RCCYNNKYWVRWSSSHWWIVAGADEPEEDQSKWSCTLFEPVYADDAKTIVRFRHVQLGHN 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR   P+E+CL+A SA  D+   DI+ I D
Sbjct: 121 ACLWRAAPPHESCLFAGSAQPDKDRCDIYTIID 152

BLAST of Cla97C06G110290 vs. TrEMBL
Match: tr|D7U3H5|D7U3H5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 9.9e-50
Identity = 91/153 (59.48%), Postives = 115/153 (75.16%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+++ LKS  YNDKYLRYIHED + HG  QFS    ++ Y+K++VE+AK G GLVHI
Sbjct: 1   MALPRYVVLKS-KYNDKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGKGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR S   WWI A ADEP+EDQS W+CTLFEPV V+ +  T+R RHVQLGH+
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR+P PY +CL+A SA+ ++ L D+  I D
Sbjct: 121 ACLWRLPPPYGSCLFAGSASPNKDLCDVCTIID 152

BLAST of Cla97C06G110290 vs. TrEMBL
Match: tr|F6HZZ6|F6HZZ6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 9.9e-50
Identity = 91/153 (59.48%), Postives = 113/153 (73.86%), Query Frame = 0

Query: 3   LQLPKFIGLKSNNYNDKYLRYIHEDSEAHGLHQFSSGVALSGYAKFEVEQAKIGNGLVHI 62
           + LP+++ LKS  YN+KYLRYIHED + HG  QFS    ++ Y+K++VE+AK G GLVHI
Sbjct: 1   MALPRYVVLKS-KYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGGGLVHI 60

Query: 63  RSVYNNKYWVRRSSTEWWIAANADEPEEDQSKWTCTLFEPVRVNDDGLTIRLRHVQLGHF 122
           R  YNNKYWVR S   WWI A ADEP+EDQS W+CTLFEPV V+ D  T+R RHVQLGH+
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHY 120

Query: 123 ACLWRVPLPYEACLYAASANHDQSLLDIFPIFD 156
           ACLWR+P PY +CL+A S + D  L D+  I D
Sbjct: 121 ACLWRLPPPYGSCLFAGSTSADNDLCDVCTIID 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004140685.12.0e-6573.08PREDICTED: uncharacterized protein LOC101213433 [Cucumis sativus] >KGN46323.1 hy... [more]
XP_008460024.18.5e-6169.03PREDICTED: uncharacterized protein LOC103498962 [Cucumis melo][more]
PSS21691.16.7e-5062.75Natterin-3 like [Actinidia chinensis var. chinensis][more]
XP_002264098.11.5e-4959.48PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera] >CBI37294.3 unn... [more]
XP_002264858.11.5e-4959.48PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KA14|A0A0A0KA14_CUCSA1.3e-6573.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G084570 PE=4 SV=1[more]
tr|A0A1S3CB39|A0A1S3CB39_CUCME5.6e-6169.03uncharacterized protein LOC103498962 OS=Cucumis melo OX=3656 GN=LOC103498962 PE=... [more]
tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH4.5e-5062.75Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc107... [more]
tr|D7U3H5|D7U3H5_VITVI9.9e-5059.48Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=... [more]
tr|F6HZZ6|F6HZZ6_VITVI9.9e-5059.48Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036242Agglutinin_dom_sf
IPR008998Agglutinin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
molecular_function GO:0030246 carbohydrate binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C06G110290.1Cla97C06G110290.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008998Agglutinin domainSMARTSM00791agglutinincoord: 3..155
e-value: 1.7E-28
score: 110.7
IPR008998Agglutinin domainPFAMPF07468Agglutinincoord: 4..155
e-value: 1.6E-35
score: 122.5
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 3..155
e-value: 6.7E-60
score: 203.2
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 4..155
IPR036242Agglutinin domain superfamilySUPERFAMILYSSF50382Agglutinincoord: 3..154

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None