Cla97C05G104790 (gene) Watermelon (97103) v2

Overview
NameCla97C05G104790
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 32562955 .. 32563212 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

mRNA sequence

ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

Coding sequence (CDS)

ATGTCGTTGCAACAGTGGCAGAGACCGGTGGACCAAGCAACTGGGGAGTGGGGTTTCGGTTCACAGGGATTTGGGGGAAAATTGGCCGGCGCCGCCATGCGGGAGTGGTTGAAAGTGGCAGAAAGAGAGGTTGGTGAGGGTGGCGGCAGTGGCGGTTGTGGCGGTGCCGATGGTAGAGAAGAGAAAGTAGCGTCCATAAACTTGAAGGAAGTGAATGCGATAAGAAATGTAAAAGGGCCGGCCGATATCTTTATTTGA

Protein sequence

MSLQQWQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVGEGGGSGGCGGADGREEKVASINLKEVNAIRNVKGPADIFI
Homology
[Close]
BLAST of Cla97C05G104790 vs. NCBI nr
Match: KGN52060.1 (hypothetical protein Csa_5G608480 [Cucumis sativus])

HSP 1 Score: 70.9 bits (172), Expect = 2.4e-09
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1  MSLQQWQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVG 46
          MSLQQWQRPVDQ T EWGFGS GF GKLAG AMR  LK+  +EVG
Sbjct: 1  MSLQQWQRPVDQPTVEWGFGSHGFWGKLAGVAMRVCLKLTGKEVG 45

[Close]
BLAST of Cla97C05G104790 vs. TrEMBL
Match: tr|A0A0A0KR25|A0A0A0KR25_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608480 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-09
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 1  MSLQQWQRPVDQATGEWGFGSQGFGGKLAGAAMREWLKVAEREVG 46
          MSLQQWQRPVDQ T EWGFGS GF GKLAG AMR  LK+  +EVG
Sbjct: 1  MSLQQWQRPVDQPTVEWGFGSHGFWGKLAGVAMRVCLKLTGKEVG 45

The following BLAST results are available for this feature:
BLAST of Cla97C05G104790 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52060.12.4e-0975.56hypothetical protein Csa_5G608480 [Cucumis sativus][more]
BLAST of Cla97C05G104790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KR25|A0A0A0KR25_CUCSA1.6e-0975.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608480 PE=4 SV=1[more]
BLAST of Cla97C05G104790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G104790 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G104790.1Cla97C05G104790.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G104790Cla020377Watermelon (97103) v1wmwmbB207
Cla97C05G104790Csa5G608480Cucumber (Chinese Long) v2cuwmbB383
Cla97C05G104790ClCG05G022910Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G104790CSPI05G25070Wild cucumber (PI 183967)cpiwmbB402
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G104790Watermelon (97103) v2wmbwmbB133
Cla97C05G104790Watermelon (97103) v2wmbwmbB124
Cla97C05G104790Watermelon (97103) v2wmbwmbB149
Cla97C05G104790Silver-seed gourdcarwmbB0413
Cla97C05G104790Silver-seed gourdcarwmbB0485
Cla97C05G104790Silver-seed gourdcarwmbB0622
Cla97C05G104790Silver-seed gourdcarwmbB0877
Cla97C05G104790Silver-seed gourdcarwmbB0878
Cla97C05G104790Silver-seed gourdcarwmbB1102
Cla97C05G104790Cucumber (Gy14) v2cgybwmbB057
Cla97C05G104790Cucumber (Gy14) v2cgybwmbB059
Cla97C05G104790Cucumber (Gy14) v2cgybwmbB365
Cla97C05G104790Cucumber (Gy14) v1cgywmbB367
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB423
Cla97C05G104790Cucumber (Gy14) v1cgywmbB498
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB073
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB128
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB238
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB766
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB758
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB760
Cla97C05G104790Cucurbita maxima (Rimu)cmawmbB768
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB062
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB220
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB403
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB729
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB732
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB738
Cla97C05G104790Cucurbita moschata (Rifu)cmowmbB740
Cla97C05G104790Wild cucumber (PI 183967)cpiwmbB062
Cla97C05G104790Wild cucumber (PI 183967)cpiwmbB064
Cla97C05G104790Wild cucumber (PI 183967)cpiwmbB493
Cla97C05G104790Cucumber (Chinese Long) v3cucwmbB058
Cla97C05G104790Cucumber (Chinese Long) v3cucwmbB060
Cla97C05G104790Cucumber (Chinese Long) v3cucwmbB398
Cla97C05G104790Cucumber (Chinese Long) v3cucwmbB486
Cla97C05G104790Cucumber (Chinese Long) v2cuwmbB061
Cla97C05G104790Cucumber (Chinese Long) v2cuwmbB062
Cla97C05G104790Bottle gourd (USVL1VR-Ls)lsiwmbB017
Cla97C05G104790Bottle gourd (USVL1VR-Ls)lsiwmbB191
Cla97C05G104790Bottle gourd (USVL1VR-Ls)lsiwmbB284
Cla97C05G104790Bottle gourd (USVL1VR-Ls)lsiwmbB369
Cla97C05G104790Melon (DHL92) v3.6.1medwmbB056
Cla97C05G104790Melon (DHL92) v3.6.1medwmbB241
Cla97C05G104790Melon (DHL92) v3.6.1medwmbB283
Cla97C05G104790Melon (DHL92) v3.5.1mewmbB060
Cla97C05G104790Melon (DHL92) v3.5.1mewmbB162
Cla97C05G104790Melon (DHL92) v3.5.1mewmbB255
Cla97C05G104790Watermelon (Charleston Gray)wcgwmbB266
Cla97C05G104790Watermelon (Charleston Gray)wcgwmbB333
Cla97C05G104790Watermelon (97103) v1wmwmbB097
Cla97C05G104790Watermelon (97103) v1wmwmbB267
Cla97C05G104790Watermelon (97103) v1wmwmbB300
Cla97C05G104790Watermelon (97103) v1wmwmbB400
Cla97C05G104790Wax gourdwgowmbB187
Cla97C05G104790Wax gourdwgowmbB530