Cla97C05G101810 (gene) Watermelon (97103) v2

Overview
NameCla97C05G101810
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 30325680 .. 30326540 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGAAAAGAATTTTCAGAAAGAAGAAGAGATGCAGGCAGTGAAGATTATGTACGTCAGAGTCTAGCAGTGAAAGATCAATTTTTTTTGGAAAACCGTTCGCATTGTCTGAAAATGGCGGAGGAGGGTAGGATCAGAAAGTGATACAGCAACCACTAGAGCCCAAAAGAAGCTATAAAAAAAAAAAAATGAAAAATGAAAAAAGAAAAAAAAAATCCAGAGGTTCGAACAATGTAAGGGGAAAAAGATGGAAGAAAGAAAGTGAAATAGTTTAAAGGGGAAGGGAAGGGAAGGGAAGGTAAGAGGTGAGAGGAGAAGGGGTAGTTGAGGAATTAGAAGGATATGTGTTATAACTGTAGAGAGTTAACTGCTAGGACAACAACCACTATCATTTTCCTTAGTCTTCACTACACACCAGCACAGGCGGTTGCGTCTGTGAAACTTTTATTGTCGTCTTTCCCGAAATGCCCTTCTTCCCTTCCTGTCCTCACTGTGGTGTGCTTTGGGGAGATATTACCATAGTACCCCTGTAGGGGGCATAATACACGTAGAGTTGTTTTCTTGAATACCACGGTATCCGTATTATGGAATCATGGAGTAGCGTATCGCGATAATATCACATCCAAGAACGAGAATATACAGCAAAGGAAGCACGTGATGTGGAATCGAATCGGGTTCGTGTTGGTGTACGCTTATGATACACACGGATGAGTGGATGATTGAGAATGCATGAAAGCCAAGGTTAATGATGGAATGGCAAGGTTTGTTTTTTCAAAAGAAGTGGTATATGGTAGCGTGGTAAGGAATGCACGTGAGGGAAGGAGGCAAGTGGCGGAAGTTGGGAAAGGGATTATTTGA

mRNA sequence

ATGTTGGGAAAAGAATTTTCAGAAAGAAGAAGAGATGCAGGCAGTGAAGATTATGTACGTCAGAGTCTAGCAGTGAAAGATCAATTTTTTTTGGAAAACCGTTCGCATTGTCTGAAAATGGCGGAGGAGGCGTATCGCGATAATATCACATCCAAGAACGAGAATATACAGCAAAGGAAGCACGTGATGTGGAATCGAATCGGCGTGGTAAGGAATGCACGTGAGGGAAGGAGGCAAGTGGCGGAAGTTGGGAAAGGGATTATTTGA

Coding sequence (CDS)

ATGTTGGGAAAAGAATTTTCAGAAAGAAGAAGAGATGCAGGCAGTGAAGATTATGTACGTCAGAGTCTAGCAGTGAAAGATCAATTTTTTTTGGAAAACCGTTCGCATTGTCTGAAAATGGCGGAGGAGGCGTATCGCGATAATATCACATCCAAGAACGAGAATATACAGCAAAGGAAGCACGTGATGTGGAATCGAATCGGCGTGGTAAGGAATGCACGTGAGGGAAGGAGGCAAGTGGCGGAAGTTGGGAAAGGGATTATTTGA

Protein sequence

MLGKEFSERRRDAGSEDYVRQSLAVKDQFFLENRSHCLKMAEEAYRDNITSKNENIQQRKHVMWNRIGVVRNAREGRRQVAEVGKGII
Homology
[Close]
BLAST of Cla97C05G101810 vs. NCBI nr
Match: KGN55222.1 (hypothetical protein Csa_4G641560 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 2  LGKEFSE---RRRDAGSEDYVRQSLAVKDQFFLENRSHCLKMAEEA-YRDNITSK 53
          +GKEF E   RRRDAGS DYVRQSLAVKDQFFLENRSHCLKM EE   R  +T++
Sbjct: 1  MGKEFPEERRRRRDAGSVDYVRQSLAVKDQFFLENRSHCLKMVEEGRIRKELTAR 55

[Close]
BLAST of Cla97C05G101810 vs. TrEMBL
Match: tr|A0A0A0L3N2|A0A0A0L3N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641560 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 40/55 (72.73%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 2  LGKEFSE---RRRDAGSEDYVRQSLAVKDQFFLENRSHCLKMAEEA-YRDNITSK 53
          +GKEF E   RRRDAGS DYVRQSLAVKDQFFLENRSHCLKM EE   R  +T++
Sbjct: 1  MGKEFPEERRRRRDAGSVDYVRQSLAVKDQFFLENRSHCLKMVEEGRIRKELTAR 55

The following BLAST results are available for this feature:
BLAST of Cla97C05G101810 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55222.12.3e-1072.73hypothetical protein Csa_4G641560 [Cucumis sativus][more]
BLAST of Cla97C05G101810 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3N2|A0A0A0L3N2_CUCSA1.5e-1072.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G641560 PE=4 SV=1[more]
BLAST of Cla97C05G101810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G101810 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G101810.1Cla97C05G101810.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G101810Csa4G641560Cucumber (Chinese Long) v2cuwmbB312
Cla97C05G101810ClCG05G020120Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G101810CsaV3_4G034610Cucumber (Chinese Long) v3cucwmbB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G101810Watermelon (97103) v2wmbwmbB017
Cla97C05G101810Watermelon (97103) v2wmbwmbB142
Cla97C05G101810Silver-seed gourdcarwmbB0187
Cla97C05G101810Silver-seed gourdcarwmbB0429
Cla97C05G101810Silver-seed gourdcarwmbB0807
Cla97C05G101810Silver-seed gourdcarwmbB0828
Cla97C05G101810Cucumber (Gy14) v2cgybwmbB127
Cla97C05G101810Cucumber (Gy14) v2cgybwmbB290
Cla97C05G101810Cucumber (Gy14) v2cgybwmbB439
Cla97C05G101810Cucumber (Gy14) v1cgywmbB132
Cla97C05G101810Cucumber (Gy14) v1cgywmbB602
Cla97C05G101810Cucumber (Gy14) v1cgywmbB605
Cla97C05G101810Cucumber (Gy14) v1cgywmbB674
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB026
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB183
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB479
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB696
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB820
Cla97C05G101810Cucurbita maxima (Rimu)cmawmbB902
Cla97C05G101810Cucurbita moschata (Rifu)cmowmbB014
Cla97C05G101810Cucurbita moschata (Rifu)cmowmbB166
Cla97C05G101810Cucurbita moschata (Rifu)cmowmbB461
Cla97C05G101810Cucurbita moschata (Rifu)cmowmbB793
Cla97C05G101810Cucurbita moschata (Rifu)cmowmbB872
Cla97C05G101810Wild cucumber (PI 183967)cpiwmbB137
Cla97C05G101810Wild cucumber (PI 183967)cpiwmbB316
Cla97C05G101810Wild cucumber (PI 183967)cpiwmbB322
Cla97C05G101810Wild cucumber (PI 183967)cpiwmbB487
Cla97C05G101810Cucumber (Chinese Long) v3cucwmbB137
Cla97C05G101810Cucumber (Chinese Long) v3cucwmbB320
Cla97C05G101810Cucumber (Chinese Long) v3cucwmbB480
Cla97C05G101810Cucumber (Chinese Long) v2cuwmbB135
Cla97C05G101810Cucumber (Chinese Long) v2cuwmbB305
Cla97C05G101810Cucumber (Chinese Long) v2cuwmbB462
Cla97C05G101810Bottle gourd (USVL1VR-Ls)lsiwmbB145
Cla97C05G101810Bottle gourd (USVL1VR-Ls)lsiwmbB288
Cla97C05G101810Bottle gourd (USVL1VR-Ls)lsiwmbB435
Cla97C05G101810Melon (DHL92) v3.6.1medwmbB277
Cla97C05G101810Melon (DHL92) v3.6.1medwmbB475
Cla97C05G101810Melon (DHL92) v3.6.1medwmbB477
Cla97C05G101810Melon (DHL92) v3.6.1medwmbB542
Cla97C05G101810Melon (DHL92) v3.5.1mewmbB293
Cla97C05G101810Melon (DHL92) v3.5.1mewmbB482
Cla97C05G101810Melon (DHL92) v3.5.1mewmbB485
Cla97C05G101810Melon (DHL92) v3.5.1mewmbB548
Cla97C05G101810Watermelon (Charleston Gray)wcgwmbB106
Cla97C05G101810Watermelon (Charleston Gray)wcgwmbB327
Cla97C05G101810Watermelon (97103) v1wmwmbB091
Cla97C05G101810Watermelon (97103) v1wmwmbB207
Cla97C05G101810Watermelon (97103) v1wmwmbB264
Cla97C05G101810Wax gourdwgowmbB301
Cla97C05G101810Wax gourdwgowmbB439
Cla97C05G101810Wax gourdwgowmbB579