Cla97C05G101280 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G101280
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Polyadenylate-binding protein 4
Location	Cla97Chr05 : 29920813 .. 29924114 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGGTTTAGTTTTCTCTCCCTGTACATTACTAGTCTAACAAGTCGTTTCGATGAATTGATGATATGATTATTTGCTGACTTGCTGGAATTTTGATTGTGATAGTTCCCAATTAAATCATTCTTTTTGATTAAGCGATAAATTCTATTCGTTAAATTAAGGGTCTAAATTCTATTCGTTAAATTACTGGAATTTAACAAATCTCAATGAGGAAGGATTGGTAACTGGTATGTGGTAAAGCAACATGGAGGTATGCTTTAAGACTTTATTAGTCCTGTTTAGAATTACTGTATCTTCTAACCTCTCCAATTCACTGCCTATTGAATATTGTGGAAAGGATACGAAGAAATATTTTATTGGACTATGTTATTAATAAATGGAAGATTACATTCTGTAGAGATAGAGAATGTGCAGATTCTATAGTCATGGGAAGATTGCATTATGTCATGATTAGATCATGTCAATTACTAGAGAATGTGTAGCATTTTATTTGAAAAATGTCAATGTCAATTACATTCTCTAGTAAATGGAAGATTACATTCTCTTGCAGTTCAGCTTTAGCGTTCTCTTAGAATCTTTTTTAGTCGAAAAATCTTGAATTGTTCTTAGGTTCGCATGGTCACGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGGTACATTTTAAATTTAGGGTTTAGTGTGCTTAAGCTTAGCCTAAAACTACTTCCAAGGAGTAGGATTAGTCTTTGGAGAGGGTGTGCAATTCTGGAATAAATGAAAGTATGAAAATTCTCTCTCCCCAGACATTTGGTTCAAGACATGGGGATATGTATCAAAAAAGGGTTATGAAAATGATAACTATAATTGTTCTCCTTAGAAATTTTGTAGCAGTTAATGTTTGTATGTCGAGACATCATGTTAGACAACAGAACACAAAAGCTATCCATTTATGTTGACTTACTTTTTGTAGATGTTTAGTAATTCAGACTGAAGTGGTTCATATGCTTAAACAGGGGTTACTTCCTCCTTATAATTCAGGCTGAAGATCGTATCTATTTGTTATATCTTTCGTTTTTCAGGCGTGCAATAATGCTACGTGTTTATTTAAGCGATTTTCTTTTGTGGAGTTACTTTTATCAATAAGATAGACCATCCAGGGTAAACTTGTGTTAGTAAGTTTTGAATCGAGGCCATTTTTATGGCATTTTCCTTTGACAACTTTAATAGAGTAATCTTATGAAAATTCTCTGTGAATCCTCGAGCAAAAGTAGTTCTGAATAGCATCTCCAAGAATTGAACTTTTTGAAATCACTGTCAGTTTGCATATGACACCAAATGAACAATTTTAAGGGTTTTATTCCTTGAATGCCTGTTTTCTTAGGGTTCACTCAAGGTTGTACACTTCCATACCTCATTTGGACTGCTTATATATATATTGGCCTGTGGTTTTTATAGGAGGATATTCGACAAATGGTTCCTTTAGCCATGGCCTCCAATCTGAAGGAGATTCTGCGAATACAACTGTGAGTTGCTTCTGTTATTTTGTTTGCATCGCTAGAGATTGCACCTCGTATTCTTGGGTTAACCTGAGCTTTCCTTTTAGATATTTGTTGGAGGGCTGGATCCTAATGTCACTGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAATCAGGTTTTCTTTTCTTATCATATGAACAATGAAATAGTAGTATCTATCTGATAATTGGTTTTGTTTATTTACTGAGTCACTAATTTATGTCACATATTCTTCTCAAATTTCCATTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCATTCTCTCCTACTGTGAAAATGATTACAATATATATATATTTTGTTATCATCACCCTCTCAATTTCCATGACTTTCCTGATGGGCAAGGATAGTAAAACAACTAAAAGCAGTCGTTTTTAGGATTCCAATTAAGTCTGAGCTTTACTTTGGTCGACGAATTTCCATAATTAATCTTTTGTCATTGACAAAAAAATGTTTTGGCCTAACTGAAAACTCATGTGGTACCATATGTGTACTTTCTATTTGAACCTTTCTCATTTATGGAACCGATTTTGGAAACAAGTACCCGAAGTATGTCTGGGTTACATTGCCTCTATATTCGTATCATTTGAAACATTGGATTTAGTTGGATAAACAAACTAACGGTAATTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTTGGAACCAGTGGAATGGATCTTACTACGGTGGCCACATATATGATGGCTATGGATATGGTCTGCAACCTCTTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTATTTATGGAAGCCATCAACAACAAGTAATCTGA

mRNA sequence

ATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGGAGGATATTCGACAAATGGTTCCTTTAGCCATGGCCTCCAATCTGAAGGAGATTCTGCGAATACAACTATATTTGTTGGAGGGCTGGATCCTAATGTCACTGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGTTCAGAGATTTTTGGAACCAGTGGAATGGATCTTACTACGGTGGCCACATATATGATGGCTATGGATATGGTCTGCAACCTCTTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTATTTATGGAAGCCATCAACAACAAGTAATCTGA

Coding sequence (CDS)

ATGCAGAGCAACAGTTCTGATTCGCAGCCGCAGGAACCAAATCAACGGCATCATCAGCCGCAGCAGCCGTGGATACCAATGCAGTACCCGCCGCCGGCCATGGTAATGCCTCACCATATGATGACGCCGCCCCTCCCCCCGCCGTATATGCATTATCATCACCATTATCAGCATCATCATCTCCCTATTCAGCATTCGCAACCGCTACCGGGATCTGGCGGCGAAAATAAGACGATTTGGGTCGGTGACTTGCATCATTGGATGGACGAGAGTTACCTCAATTCCTGCTTTTCTTCCATTGGCGAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCCGGAGTGTTCATGCCAAATACAAAGCAAACTTTCCGCCTCAATTGGGCAACATTTAGCACCAGTGACAAGCGATCGGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGACGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATTTCCTTCGGTTAAAGCAGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAACGAAAGGTCTCAAGCCATGACTGAAATGAATGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAAAAAGTCCTCTGGATTTCAGCAAAAGCATTCTCCACAAGGAGGATATTCGACAAATGGTTCCTTTAGCCATGGCCTCCAATCTGAAGGAGATTCTGCGAATACAACTATATTTGTTGGAGGGCTGGATCCTAATGTCACTGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGTTCAGAGATTTTTGGAACCAGTGGAATGGATCTTACTACGGTGGCCACATATATGATGGCTATGGATATGGTCTGCAACCTCTTCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTATTTATGGAAGCCATCAACAACAAGTAATCTGA

Protein sequence

MQSNSSDSQPQEPNQRHHQPQQPWIPMQYPPPAMVMPHHMMTPPLPPPYMHYHHHYQHHHLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQVI

Homology

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BLAST of Cla97C05G101280 vs. NCBI nr
Match: XP_004141245.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis sativus])

HSP 1 Score: 678.7 bits (1750), Expect = 1.2e-191
Identity = 370/420 (88.10%), Postives = 386/420 (91.90%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQRHXXXXXXWIP-------MQYXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQ+N SDSQPQEPNQRH      WIP          XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQNNGSDSQPQEPNQRHQQQPHPWIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 120
           XXXXXXXLPIQ SQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  XXXXXXXLPIQPSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIF 180
           TGLSEGYGFVEF SH TAEK LQNYSG+FMP+T+QTFRLNWATFST DKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240
           VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 GVYCSSRPMRIGAATPKKSSGFQQKHSPQ-GGYSTNGSFSHGLQSEGDSANTTIFVGGLD 300
           G+YCSSRPMRIGAATP+KSSG+QQ+HS Q GGYSTNG FS GLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLS 360
           PNVTDEDLRQPF QYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
           WGRNPANKQFRDF NQWNG+YYGGHIYDGYGYGL   HDPSMYHAAYGAYT+YG+HQQQV
Sbjct: 361 WGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of Cla97C05G101280 vs. NCBI nr
Match: XP_008452518.1 (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo])

HSP 1 Score: 678.7 bits (1750), Expect = 1.2e-191
Identity = 370/420 (88.10%), Postives = 387/420 (92.14%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQRHXXXXXXWI-------PMQYXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQSN SDSQPQEPNQRH      WI           XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 120
           XXXXXXXLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  XXXXXXXLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIF 180
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+T+QTFRLNWATFST DKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240
           VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 GVYCSSRPMRIGAATPKKSSGFQQKHSPQ-GGYSTNGSFSHGLQSEGDSANTTIFVGGLD 300
           G+YCSSRPMRIGAATP+KSSG+QQ+HS Q GGYSTNG FS GLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLS 360
           PNVTDEDLRQPF Q+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
           WGRNPANKQFR+F NQWNG+YYGGHIYDGYGYGL   HDPSMYHAAYGAYT+YG+HQQQV
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of Cla97C05G101280 vs. NCBI nr
Match: XP_022936173.1 (polyadenylate-binding protein RBP47C-like [Cucurbita moschata])

HSP 1 Score: 666.8 bits (1719), Expect = 4.9e-188
Identity = 365/420 (86.90%), Postives = 387/420 (92.14%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQRHXXXXXXWIPMQY-------XXXXXXXXXXXXXXXXXXXXXXXX 60
           MQSN SDSQPQEPNQRH      W+ MQY       XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRH-QQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 120
           XXXXXXX      QPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEIA++K+IRNKQ
Sbjct: 61  XXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEIASIKIIRNKQ 120

Query: 121 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIF 180
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+T+Q FRLNWATFST DKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240
           VGDLAADVTD+LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 241 GVYCSSRPMRIGAATPKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDP 300
           GVYCSSRPMRIGAATP+KSSG+QQ++S QGGYSTNG FS GLQSEGDSANTTIFVGGLDP
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPFSQGLQSEGDSANTTIFVGGLDP 300

Query: 301 NVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSW 360
           NVTDEDLRQPF QYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT+RLSW
Sbjct: 301 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSW 360

Query: 361 GRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQVI 414
           GRNPANKQFRDF NQWNG+YYGGHIYDGYGYGL P HDPSMY AAYGAYT+YGSHQQQVI
Sbjct: 361 GRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYQAAYGAYTVYGSHQQQVI 418

[Close]

BLAST of Cla97C05G101280 vs. NCBI nr
Match: XP_023535397.1 (polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.4 bits (1718), Expect = 6.3e-188
Identity = 364/420 (86.67%), Postives = 387/420 (92.14%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQRHXXXXXXWIPMQY-------XXXXXXXXXXXXXXXXXXXXXXXX 60
           MQSN SDSQPQEPNQRH      W+ MQY       XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRH-QQPQSWMSMQYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 120
           XXXXXXX      QPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++K+IRNKQ
Sbjct: 61  XXXXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHTCFASIGEISSIKIIRNKQ 120

Query: 121 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIF 180
           +GLSEGYGFVEFF+HATAEKALQNY+GV MP+T+Q FRLNWATFST DKRSDNDPDLSIF
Sbjct: 121 SGLSEGYGFVEFFAHATAEKALQNYAGVLMPSTEQPFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240
           VGDLAADVTD+LLY+TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAM+EMN
Sbjct: 181 VGDLAADVTDALLYDTFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMSEMN 240

Query: 241 GVYCSSRPMRIGAATPKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDP 300
           GVYCSSRPMRIGAATP+KSSG+QQ++S QGGYSTNG  S GLQSEGDSANTTIFVGGLDP
Sbjct: 241 GVYCSSRPMRIGAATPRKSSGYQQQNSSQGGYSTNGPLSQGLQSEGDSANTTIFVGGLDP 300

Query: 301 NVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSW 360
           NVTDEDLRQPF QYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQT+RLSW
Sbjct: 301 NVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTIRLSW 360

Query: 361 GRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQVI 414
           GRNPANKQFRDF NQWNG+YYGGHIYDGYGYGL P HDPSMYHAAYGAYT+YGSHQQQVI
Sbjct: 361 GRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLPP-HDPSMYHAAYGAYTVYGSHQQQVI 418

[Close]

BLAST of Cla97C05G101280 vs. NCBI nr
Match: XP_022140707.1 (polyadenylate-binding protein RBP47-like [Momordica charantia])

HSP 1 Score: 660.2 bits (1702), Expect = 4.5e-186
Identity = 369/418 (88.28%), Postives = 387/418 (92.58%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQ-----RHXXXXXXWIPMQYXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQSN SDSQPQEPNQ       XXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTG 120
           XXXXX      QPL GSGGENKTIWVGDLHHWMDESYL++CF+SIGEI+++KVIRNKQTG
Sbjct: 61  XXXXXXXXXXXQPLQGSGGENKTIWVGDLHHWMDESYLHNCFASIGEISSIKVIRNKQTG 120

Query: 121 LSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVG 180
           LSEGYGFVEFF+HATAEKALQNYSG+FMPNT+Q FRLNWATFST DKRSDNDPDLSIFVG
Sbjct: 121 LSEGYGFVEFFAHATAEKALQNYSGMFMPNTEQAFRLNWATFSTGDKRSDNDPDLSIFVG 180

Query: 181 DLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGV 240
           DLAADVTD+LLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGV
Sbjct: 181 DLAADVTDTLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGV 240

Query: 241 YCSSRPMRIGAATPKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNV 300
           YCSSRPMRIGAATP+KSSG+QQ++S QGGYS+NGSFS GLQSEGDSANTTIFVGGLDPNV
Sbjct: 241 YCSSRPMRIGAATPRKSSGYQQQYSSQGGYSSNGSFSQGLQSEGDSANTTIFVGGLDPNV 300

Query: 301 TDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGR 360
           TDEDLRQPF QYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQTVRLSWGR
Sbjct: 301 TDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWGR 360

Query: 361 NPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQVI 414
           NPANKQFRDF NQWNG+YYGGH+YDGYGYGL P HDPSMYHAAYGAY +YGSHQQQVI
Sbjct: 361 NPANKQFRDFGNQWNGAYYGGHMYDGYGYGLPP-HDPSMYHAAYGAYPVYGSHQQQVI 417

[Close]

BLAST of Cla97C05G101280 vs. TrEMBL
Match: tr|A0A1S3BUU0|A0A1S3BUU0_CUCME (polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 8.2e-192
Identity = 370/420 (88.10%), Postives = 387/420 (92.14%), Query Frame = 0


Query: 1   MQSNSSDSQPQEPNQRHXXXXXXWI-------PMQYXXXXXXXXXXXXXXXXXXXXXXXX 60
           MQSN SDSQPQEPNQRH      WI           XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MQSNGSDSQPQEPNQRHQQQPQPWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXLPIQHSQPLPGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQ 120
           XXXXXXXLPIQHSQPL GSG ENKTIWVGDLHHWMDESYL+SCFSS+GEI+++KVIRNKQ
Sbjct: 61  XXXXXXXLPIQHSQPLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQ 120

Query: 121 TGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIF 180
           TGLSEGYGFVEF SHATAEK LQNYSG+FMP+T+QTFRLNWATFST DKRSDNDPDLSIF
Sbjct: 121 TGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIF 180

Query: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240
           VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN
Sbjct: 181 VGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMN 240

Query: 241 GVYCSSRPMRIGAATPKKSSGFQQKHSPQ-GGYSTNGSFSHGLQSEGDSANTTIFVGGLD 300
           G+YCSSRPMRIGAATP+KSSG+QQ+HS Q GGYSTNG FS GLQSEGDSANTTIFVGGLD
Sbjct: 241 GIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSANTTIFVGGLD 300

Query: 301 PNVTDEDLRQPFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLS 360
           PNVTDEDLRQPF Q+GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLN TVIGKQTVRLS
Sbjct: 301 PNVTDEDLRQPFSQHGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLS 360

Query: 361 WGRNPANKQFRDFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
           WGRNPANKQFR+F NQWNG+YYGGHIYDGYGYGL   HDPSMYHAAYGAYT+YG+HQQQV
Sbjct: 361 WGRNPANKQFREFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYGAYTVYGNHQQQV 420

[Close]

BLAST of Cla97C05G101280 vs. TrEMBL
Match: tr|M5XWD8|M5XWD8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 8.5e-165
Identity = 287/341 (84.16%), Postives = 312/341 (91.50%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEK 133
           GENKTIWVGDLHHWMDE+YL++CF+S GEIA++KVIRNKQT LSEGYGFVEFFSHATAEK
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 134 ALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSK 193
            LQ Y+G+ MPNT+Q FRLNWATFST DKRSDN PDLSIFVGDLAADVTDSLL+ETFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 194 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSS 253
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMTEMNGVYCSSRPMRIGAATP+KSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 254 GFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSV 313
           G+QQ++S QGGY +NG+ + G QS+GDS NTTIFVGGLDPNVTDEDLR PF QYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 314 KIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR-DFWNQWNGS 373
           KIPVGKGCGFVQFANRN+AEEAL KLN TVIGKQTVRLSWGRNPANKQFR DF NQW G+
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQFRTDFGNQWAGA 396

Query: 374 YYGGHIYDGYGYGLQPLHDPSMY-HAAYGAYTIYGSHQQQV 413
           YYGG +YDGYGY L P HDPSMY  AAYGAY +YG+HQQQV
Sbjct: 397 YYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQV 437

[Close]

BLAST of Cla97C05G101280 vs. TrEMBL
Match: tr|A0A2C9U131|A0A2C9U131_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 9.4e-164
Identity = 279/340 (82.06%), Postives = 312/340 (91.76%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEK 133
           GENKTIW+GDLHHWMDE+YL++CF+S GEIA++KVIRNKQTGLSEGYGFVEFF+HATAEK
Sbjct: 96  GENKTIWIGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTGLSEGYGFVEFFTHATAEK 155

Query: 134 ALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSK 193
            LQNY+G+ MPNT+Q FRLNWATFST DKRSDN PDLSIFVGDLAADVTDS+L+ETF+S+
Sbjct: 156 VLQNYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSILHETFASR 215

Query: 194 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSS 253
           +PSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAMTEMNGV+CSSRPMRIGAATP+KSS
Sbjct: 216 YPSVKAAKVVFDANTGRSKGYGFVRFGDDSERAQAMTEMNGVHCSSRPMRIGAATPRKSS 275

Query: 254 GFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSV 313
           G+QQ    QGGY++NG+   G QS+GDS NTTIFVGGLDPNVTDEDL+QPF QYGE+VSV
Sbjct: 276 GYQQ----QGGYASNGASGQGFQSDGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEVVSV 335

Query: 314 KIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR-DFWNQWNGS 373
           KIPVGKGCGFVQF NR++AEEALQKLN TVIGKQTVRLSWGRNPANKQFR D  NQW+G+
Sbjct: 336 KIPVGKGCGFVQFGNRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRSDLGNQWSGA 395

Query: 374 YYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
           YYGG +YDGYGY L P HDPSMY AAYGAY +YGSHQQQV
Sbjct: 396 YYGGQVYDGYGYALPPPHDPSMYAAAYGAYPVYGSHQQQV 431

[Close]

BLAST of Cla97C05G101280 vs. TrEMBL
Match: tr|A0A251RCH6|A0A251RCH6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.1e-163
Identity = 287/342 (83.92%), Postives = 312/342 (91.23%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEK 133
           GENKTIWVGDLHHWMDE+YL++CF+S GEIA++KVIRNKQT LSEGYGFVEFFSHATAEK
Sbjct: 97  GENKTIWVGDLHHWMDENYLHTCFASTGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEK 156

Query: 134 ALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSK 193
            LQ Y+G+ MPNT+Q FRLNWATFST DKRSDN PDLSIFVGDLAADVTDSLL+ETFSSK
Sbjct: 157 VLQTYTGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSK 216

Query: 194 FPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSS 253
           +PSVKAAKVV DANTGRSKGYGFVRFGD+NERSQAMTEMNGVYCSSRPMRIGAATP+KSS
Sbjct: 217 YPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSS 276

Query: 254 GFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSV 313
           G+QQ++S QGGY +NG+ + G QS+GDS NTTIFVGGLDPNVTDEDLR PF QYGEIVSV
Sbjct: 277 GYQQQYSSQGGYVSNGTPTQGFQSDGDSTNTTIFVGGLDPNVTDEDLRHPFSQYGEIVSV 336

Query: 314 KIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANK-QFR-DFWNQWNG 373
           KIPVGKGCGFVQFANRN+AEEAL KLN TVIGKQTVRLSWGRNPANK QFR DF NQW G
Sbjct: 337 KIPVGKGCGFVQFANRNNAEEALPKLNGTVIGKQTVRLSWGRNPANKQQFRTDFGNQWAG 396

Query: 374 SYYGGHIYDGYGYGLQPLHDPSMY-HAAYGAYTIYGSHQQQV 413
           +YYGG +YDGYGY L P HDPSMY  AAYGAY +YG+HQQQV
Sbjct: 397 AYYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVYGTHQQQV 438

[Close]

BLAST of Cla97C05G101280 vs. TrEMBL
Match: tr|A0A2K1XPV7|A0A2K1XPV7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G034600v3 PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 3.6e-163
Identity = 289/354 (81.64%), Postives = 313/354 (88.42%), Query Frame = 0


Query: 64  QHSQPLPGSG-GENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGF 123
           QH+Q     G GENKTIW+GDLHHWMDE+YL+SCF S GEIA++KVIRNKQTGLSEGYGF
Sbjct: 79  QHTQKQQREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGF 138

Query: 124 VEFFSHATAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVT 183
           VEF +HATAEK LQNY G+ MPNT+Q FRLNWATFST DKRSDN PDLSIFVGDLAADVT
Sbjct: 139 VEFLTHATAEKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVT 198

Query: 184 DSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPM 243
           DSLL ETF SK+PSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAMTEMNGVYCSSRPM
Sbjct: 199 DSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPM 258

Query: 244 RIGAATPKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQ 303
           RIGAATP+KSSG+QQ    QGGY +NG+ + G QS+GDS NTTIFVGGLDPNVTDEDL+Q
Sbjct: 259 RIGAATPRKSSGYQQ----QGGYGSNGASAQGFQSDGDSNNTTIFVGGLDPNVTDEDLKQ 318

Query: 304 PFLQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQF 363
           PF QYGEIVSVKIPVGKGCGFVQFANR++AEEALQKLN TVIGKQTVRLSWGRNPANKQF
Sbjct: 319 PFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQF 378

Query: 364 R-DFWNQWNGSYYGGHIYDGYGYGLQPLHDPSMY---HAAYGAYTIYGSHQQQV 413
           R DF + WNG+YYGG +YDGYGY L P HDPSMY    AAYGAY IYGSHQQQV
Sbjct: 379 RADFGSPWNGAYYGGQVYDGYGYALPPPHDPSMYAAAAAAYGAYPIYGSHQQQV 428

[Close]

BLAST of Cla97C05G101280 vs. Swiss-Prot
Match: sp|Q9SX80|R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 9.8e-132
Identity = 244/343 (71.14%), Postives = 282/343 (82.22%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVEFFSHATA 133
           GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVEF SH  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 134 EKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLLYETF 193
           +K LQ ++G  MPNT Q FRLNWA+FST +KR +N+ PDLSIFVGDLA DV+D+LL+ETF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 194 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPK 253
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 254 KSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEI 313
           K++G+QQ    QGGY  +G+F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPF ++GEI
Sbjct: 280 KTNGYQQ----QGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 314 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRD-FWNQW 373
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN TVIGKQTVRLSWGRNPANKQ RD + NQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 374 NGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
              YYGG  Y+GYGY + P  DP MY AA   Y +YG HQQQV
Sbjct: 400 VDPYYGGQFYNGYGY-MVPQPDPRMYPAA-PYYPMYGGHQQQV 433

[Close]

BLAST of Cla97C05G101280 vs. Swiss-Prot
Match: sp|Q9SX79|RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 9.8e-132
Identity = 243/343 (70.85%), Postives = 281/343 (81.92%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFFSHATA 133
           GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF SH  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 134 EKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLLYETF 193
           +K L+ ++G  MPNT Q FRLNWA+FST +KR +N+ PDLSIFVGDL+ DV+D+LL+ETF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 194 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPK 253
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 254 KSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEI 313
           K++G+QQ    QGGY  NG+ +   + EGD  NTTIFVGGLD +VTDEDL+QPF ++GEI
Sbjct: 278 KTNGYQQ----QGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 314 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRD-FWNQW 373
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN TVIGKQTVRLSWGRNPANKQ RD + NQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 374 NGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
              YYGG  Y+GYGY + P  DP MY AA   Y +YG HQQQV
Sbjct: 398 VDPYYGGQFYNGYGY-MVPQPDPRMYPAA-PYYPMYGGHQQQV 431

[Close]

BLAST of Cla97C05G101280 vs. Swiss-Prot
Match: sp|Q9LEB3|RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 7.8e-129
Identity = 229/346 (66.18%), Postives = 276/346 (79.77%), Query Frame = 0


Query: 75  ENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKA 134
           +NKTIW+GDL  WMDESYL+SCFS  GE+ ++K+IRNKQTG SE YGFVEF +HA AEK 
Sbjct: 82  DNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKV 141

Query: 135 LQNYSGVFMPNTKQTFRLNWATFSTSDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKF 194
           LQ+Y+G  MPNT+Q FRLNWA FST +KR++   D SIFVGDLA+DVTD++L +TF+S++
Sbjct: 142 LQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRY 201

Query: 195 PSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSG 254
           PS+K AKVV+DANTG SKGYGFVRFGD++ERS+AMTEMNGVYCSSR MRIG ATPKK S 
Sbjct: 202 PSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSA 261

Query: 255 FQQKHSP----QGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEI 314
            +Q  S      GGY++NG+ +HG QS+GDS+NTTIFVGGLD  VTDE+LRQ F Q+GE+
Sbjct: 262 HEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEV 321

Query: 315 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR-DFWNQW 374
           VSVKIP GKGCGFVQF++R+ A+EA+QKL+  +IGKQ VRLSWGR+PANKQ R D  +QW
Sbjct: 322 VSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQW 381

Query: 375 NGSYYGGHIYDGYGYGLQPLHDPSMY--HAAYGAYT-IYGSHQQQV 413
           NG Y G   Y GYGYG     D  MY   AAYGA +  YG+HQQ V
Sbjct: 382 NGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASSNRYGNHQQPV 427

[Close]

BLAST of Cla97C05G101280 vs. Swiss-Prot
Match: sp|Q0WW84|RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-119
Identity = 210/307 (68.40%), Postives = 255/307 (83.06%), Query Frame = 0


Query: 71  GSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHAT 130
           GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK T  SEGYGFVEF S A 
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161

Query: 131 AEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRS-DNDPDLSIFVGDLAADVTDSLLYET 190
           AE+ LQNYSG  MPN+ Q FR+NWA+FST +KR+ +N PDLS+FVGDL+ DVTD LL+ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221

Query: 191 FSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATP 250
           FS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATP
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281

Query: 251 KKSSGFQQKHSPQ-----GGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPF 310
           K++   QQ+HS Q     GG+ +NGS  +G QS+G+S N TIFVGG+DP+V DEDLRQPF
Sbjct: 282 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 341

Query: 311 LQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR- 370
            Q+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN TVIGK TVRLSWGR+P NKQ+R 
Sbjct: 342 SQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRG 401

[Close]

BLAST of Cla97C05G101280 vs. Swiss-Prot
Match: sp|F4I3B3|RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 6.4e-115
Identity = 212/327 (64.83%), Postives = 258/327 (78.90%), Query Frame = 0


Query: 77  KTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQ 136
           KT+WVGDL HWMDE+YL++CFS   E++++KVIRNKQT  SEGYGFVEF S + AE+ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 137 NYSGVFMPNTKQTFRLNWATFSTSDKR-SDNDPDLSIFVGDLAADVTDSLLYETFSSKFP 196
           ++SGV MPN +Q FRLNWA+FST +KR S+N PDLSIFVGDLA DV+D++L ETF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 197 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGF 256
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ +
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 257 QQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSVKI 316
            Q++  Q      G   +G  S+G+S N+TIFVGGLD +VT+EDL QPF  +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 317 PVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR-DFWNQWNGSYY 376
           PVGKGCGFVQFANR  AEEA+  LN TVIGK TVRLSWGR+P NKQ+R D  NQWNG Y 
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYS 418

Query: 377 GGHIYDGYGYGLQPLHDPSMYHAAYGA 402
            G  Y+  GY  Q   D +MY  A  A
Sbjct: 419 RGQGYNN-GYANQ---DSNMYATAAAA 440

[Close]

BLAST of Cla97C05G101280 vs. TAIR10
Match: AT1G47500.1 (RNA-binding protein 47C')

HSP 1 Score: 471.5 bits (1212), Expect = 5.4e-133
Identity = 244/343 (71.14%), Postives = 282/343 (82.22%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSSI--GEIAALKVIRNKQTGLSEGYGFVEFFSHATA 133
           GENKTIWVGDL +WMDE+YLNS F+S    EI +LKVIRNK  G SEGYGFVEF SH  A
Sbjct: 100 GENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVA 159

Query: 134 EKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLLYETF 193
           +K LQ ++G  MPNT Q FRLNWA+FST +KR +N+ PDLSIFVGDLA DV+D+LL+ETF
Sbjct: 160 DKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETF 219

Query: 194 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPK 253
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+
Sbjct: 220 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 279

Query: 254 KSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEI 313
           K++G+QQ    QGGY  +G+F+   +SEGD+ NTTIFVGGLD +VTDEDL+QPF ++GEI
Sbjct: 280 KTNGYQQ----QGGYMPSGAFT---RSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEI 339

Query: 314 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRD-FWNQW 373
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN TVIGKQTVRLSWGRNPANKQ RD + NQW
Sbjct: 340 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 399

Query: 374 NGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
              YYGG  Y+GYGY + P  DP MY AA   Y +YG HQQQV
Sbjct: 400 VDPYYGGQFYNGYGY-MVPQPDPRMYPAA-PYYPMYGGHQQQV 433

[Close]

BLAST of Cla97C05G101280 vs. TAIR10
Match: AT1G47490.1 (RNA-binding protein 47C)

HSP 1 Score: 471.5 bits (1212), Expect = 5.4e-133
Identity = 243/343 (70.85%), Postives = 281/343 (81.92%), Query Frame = 0


Query: 74  GENKTIWVGDLHHWMDESYLNSCFSS--IGEIAALKVIRNKQTGLSEGYGFVEFFSHATA 133
           GENKTIWVGDLHHWMDE+YLNS F+S    EI ++KVIRNK  GLSEGYGFVEF SH  A
Sbjct: 98  GENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVA 157

Query: 134 EKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLLYETF 193
           +K L+ ++G  MPNT Q FRLNWA+FST +KR +N+ PDLSIFVGDL+ DV+D+LL+ETF
Sbjct: 158 DKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETF 217

Query: 194 SSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPK 253
           S K+PSVKAAKVV+DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATP+
Sbjct: 218 SEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPR 277

Query: 254 KSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEI 313
           K++G+QQ    QGGY  NG+ +   + EGD  NTTIFVGGLD +VTDEDL+QPF ++GEI
Sbjct: 278 KTNGYQQ----QGGYMPNGTLT---RPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEI 337

Query: 314 VSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRD-FWNQW 373
           VSVKIPVGKGCGFVQF NR +AEEAL+KLN TVIGKQTVRLSWGRNPANKQ RD + NQW
Sbjct: 338 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 397

Query: 374 NGSYYGGHIYDGYGYGLQPLHDPSMYHAAYGAYTIYGSHQQQV 413
              YYGG  Y+GYGY + P  DP MY AA   Y +YG HQQQV
Sbjct: 398 VDPYYGGQFYNGYGY-MVPQPDPRMYPAA-PYYPMYGGHQQQV 431

[Close]

BLAST of Cla97C05G101280 vs. TAIR10
Match: AT3G19130.1 (RNA-binding protein 47B)

HSP 1 Score: 431.0 bits (1107), Expect = 8.1e-121
Identity = 210/307 (68.40%), Postives = 255/307 (83.06%), Query Frame = 0


Query: 71  GSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHAT 130
           GSG + KT+WVGDL HWMDE+YL+SCFS  GE++++KVIRNK T  SEGYGFVEF S A 
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161

Query: 131 AEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRS-DNDPDLSIFVGDLAADVTDSLLYET 190
           AE+ LQNYSG  MPN+ Q FR+NWA+FST +KR+ +N PDLS+FVGDL+ DVTD LL+ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221

Query: 191 FSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATP 250
           FS ++PSVK+AKVVID+NTGRSKGYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATP
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281

Query: 251 KKSSGFQQKHSPQ-----GGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPF 310
           K++   QQ+HS Q     GG+ +NGS  +G QS+G+S N TIFVGG+DP+V DEDLRQPF
Sbjct: 282 KRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF 341

Query: 311 LQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR- 370
            Q+GE+VSVKIPVGKGCGFVQFA+R  AE+A++ LN TVIGK TVRLSWGR+P NKQ+R 
Sbjct: 342 SQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRG 401

[Close]

BLAST of Cla97C05G101280 vs. TAIR10
Match: AT1G49600.1 (RNA-binding protein 47A)

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-116
Identity = 212/327 (64.83%), Postives = 258/327 (78.90%), Query Frame = 0


Query: 77  KTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQ 136
           KT+WVGDL HWMDE+YL++CFS   E++++KVIRNKQT  SEGYGFVEF S + AE+ALQ
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178

Query: 137 NYSGVFMPNTKQTFRLNWATFSTSDKR-SDNDPDLSIFVGDLAADVTDSLLYETFSSKFP 196
           ++SGV MPN +Q FRLNWA+FST +KR S+N PDLSIFVGDLA DV+D++L ETF+ ++P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238

Query: 197 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPKKSSGF 256
           SVK AKVVID+NTGRSKGYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATPK+++ +
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298

Query: 257 QQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYGEIVSVKI 316
            Q++  Q      G   +G  S+G+S N+TIFVGGLD +VT+EDL QPF  +GE+VSVKI
Sbjct: 299 GQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKI 358

Query: 317 PVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFR-DFWNQWNGSYY 376
           PVGKGCGFVQFANR  AEEA+  LN TVIGK TVRLSWGR+P NKQ+R D  NQWNG Y 
Sbjct: 359 PVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQWNGGYS 418

Query: 377 GGHIYDGYGYGLQPLHDPSMYHAAYGA 402
            G  Y+  GY  Q   D +MY  A  A
Sbjct: 419 RGQGYNN-GYANQ---DSNMYATAAAA 440

[Close]

BLAST of Cla97C05G101280 vs. TAIR10
Match: AT5G54900.1 (RNA-binding protein 45A)

HSP 1 Score: 352.4 bits (903), Expect = 3.7e-97
Identity = 190/347 (54.76%), Postives = 238/347 (68.59%), Query Frame = 0


Query: 70  PGSGGENKTIWVGDLHHWMDESYLNSCFSSIGEIAALKVIRNKQTGLSEGYGFVEFFSHA 129
           PGS  + K++W+GDL  WMDE+Y+ S F+  GE  + KVIRNK TG SEGYGF+EF SH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 130 TAEKALQNYSGVFMPNTKQTFRLNWATFSTSDKRSDND-PDLSIFVGDLAADVTDSLLYE 189
            AE+ LQ Y+G  MP+T+QTFRLNWA     +KR   + PD +IFVGDLA +VTD +L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 190 TFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAAT 249
           TF + + SVK AKVV+D  TGRSKGYGFVRF D+NE+ +AMTEMNG YCS+RPMRIG A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 250 PKKSSGFQQKHSPQGGYSTNGSFSHGLQSEGDSANTTIFVGGLDPNVTDEDLRQPFLQYG 309
            K +   Q    P    +T G+ +     + D  NTTIFVGGLD NVTD++L+  F Q+G
Sbjct: 233 NKNALPMQ----PAMYQNTQGANA----GDNDPNNTTIFVGGLDANVTDDELKSIFGQFG 292

Query: 310 EIVSVKIPVGKGCGFVQFANRNDAEEALQKLNATVIGKQTVRLSWGRNPANKQFRDFWNQ 369
           E++ VKIP GK CGFVQ+AN+  AE AL  LN T +G Q++RLSWGR+P NKQ      Q
Sbjct: 293 ELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQSDQ--AQ 352

Query: 370 WNGSYYGGH---IYDGYGYGLQ-PLHDPSMYHAAYGAYTIYGSHQQQ 412
           WNG  Y G+      GYGY  Q P  DP+ Y   YG YT YG++QQQ
Sbjct: 353 WNGGGYYGYPPQPQGGYGYAAQPPTQDPNAY---YGGYTGYGNYQQQ 385

The following BLAST results are available for this feature:

BLAST of Cla97C05G101280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141245.1	1.2e-191	88.10	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis sativus]	[more]
XP_008452518.1	1.2e-191	88.10	PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo]	[more]
XP_022936173.1	4.9e-188	86.90	polyadenylate-binding protein RBP47C-like [Cucurbita moschata]	[more]
XP_023535397.1	6.3e-188	86.67	polyadenylate-binding protein RBP47C-like [Cucurbita pepo subsp. pepo]	[more]
XP_022140707.1	4.5e-186	88.28	polyadenylate-binding protein RBP47-like [Momordica charantia]	[more]

BLAST of Cla97C05G101280 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BUU0\|A0A1S3BUU0_CUCME	8.2e-192	88.10	polyadenylate-binding protein RBP47-like OS=Cucumis melo OX=3656 GN=LOC103493523...	[more]
tr\|M5XWD8\|M5XWD8_PRUPE	8.5e-165	84.16	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A2C9U131\|A0A2C9U131_MANES	9.4e-164	82.06	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_18G033900 PE=4 SV=...	[more]
tr\|A0A251RCH6\|A0A251RCH6_PRUPE	2.1e-163	83.92	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G440700 PE=4 SV=1	[more]
tr\|A0A2K1XPV7\|A0A2K1XPV7_POPTR	3.6e-163	81.64	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G034600v3 PE=...	[more]

BLAST of Cla97C05G101280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SX80\|R47CP_ARATH	9.8e-132	71.14	Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C'...	[more]
sp\|Q9SX79\|RB47C_ARATH	9.8e-132	70.85	Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C P...	[more]
sp\|Q9LEB3\|RBP47_NICPL	7.8e-129	66.18	Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4...	[more]
sp\|Q0WW84\|RB47B_ARATH	1.5e-119	68.40	Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B P...	[more]
sp\|F4I3B3\|RB47A_ARATH	6.4e-115	64.83	Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A P...	[more]

BLAST of Cla97C05G101280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G47500.1	5.4e-133	71.14	RNA-binding protein 47C'	[more]
AT1G47490.1	5.4e-133	70.85	RNA-binding protein 47C	[more]
AT3G19130.1	8.1e-121	68.40	RNA-binding protein 47B	[more]
AT1G49600.1	3.5e-116	64.83	RNA-binding protein 47A	[more]
AT5G54900.1	3.7e-97	54.76	RNA-binding protein 45A	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0016032	viral process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G101280.1	Cla97C05G101280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 78..153 e-value: 7.7E-14 score: 62.0 coord: 285..352 e-value: 2.6E-21 score: 86.8 coord: 171..245 e-value: 2.1E-18 score: 77.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 286..349 e-value: 3.1E-18 score: 65.3 coord: 172..241 e-value: 1.3E-15 score: 56.9 coord: 79..146 e-value: 2.8E-14 score: 52.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 77..157 score: 14.726
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 284..356 score: 18.052
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 170..249 score: 16.841
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 76..156 e-value: 1.0E-22 score: 82.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 169..245 e-value: 3.6E-21 score: 77.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 270..362 e-value: 1.1E-24 score: 88.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..266
None	No IPR available	PANTHER	PTHR43955:SF5	POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED	coord: 7..412
None	No IPR available	PANTHER	PTHR43955	FAMILY NOT NAMED	coord: 7..412
None	No IPR available	CDD	cd12345	RRM2_SECp43_like	coord: 169..248 e-value: 4.10303E-46 score: 154.359
None	No IPR available	CDD	cd12344	RRM1_SECp43_like	coord: 78..158 e-value: 2.53872E-42 score: 143.942
None	No IPR available	CDD	cd12346	RRM3_NGR1_NAM8_like	coord: 283..354 e-value: 1.08883E-39 score: 136.664
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 150..272
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 43..159
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 276..377

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G101280	Wax gourd	wgowmbB301
Cla97C05G101280	Wax gourd	wgowmbB579
Cla97C05G101280	Watermelon (97103) v2	wmbwmbB142
Cla97C05G101280	Silver-seed gourd	carwmbB0107
Cla97C05G101280	Silver-seed gourd	carwmbB0807
Cla97C05G101280	Cucumber (Gy14) v2	cgybwmbB127
Cla97C05G101280	Cucumber (Gy14) v2	cgybwmbB290
Cla97C05G101280	Cucumber (Gy14) v1	cgywmbB190
Cla97C05G101280	Cucumber (Gy14) v1	cgywmbB408
Cla97C05G101280	Cucurbita maxima (Rimu)	cmawmbB026
Cla97C05G101280	Cucurbita maxima (Rimu)	cmawmbB479
Cla97C05G101280	Cucurbita moschata (Rifu)	cmowmbB014
Cla97C05G101280	Cucurbita moschata (Rifu)	cmowmbB166
Cla97C05G101280	Cucurbita moschata (Rifu)	cmowmbB461
Cla97C05G101280	Wild cucumber (PI 183967)	cpiwmbB137
Cla97C05G101280	Wild cucumber (PI 183967)	cpiwmbB316
Cla97C05G101280	Cucumber (Chinese Long) v3	cucwmbB137
Cla97C05G101280	Cucumber (Chinese Long) v3	cucwmbB314
Cla97C05G101280	Cucumber (Chinese Long) v2	cuwmbB135
Cla97C05G101280	Cucumber (Chinese Long) v2	cuwmbB305
Cla97C05G101280	Bottle gourd (USVL1VR-Ls)	lsiwmbB288
Cla97C05G101280	Bottle gourd (USVL1VR-Ls)	lsiwmbB435
Cla97C05G101280	Melon (DHL92) v3.6.1	medwmbB277
Cla97C05G101280	Melon (DHL92) v3.6.1	medwmbB477
Cla97C05G101280	Melon (DHL92) v3.5.1	mewmbB293
Cla97C05G101280	Melon (DHL92) v3.5.1	mewmbB485
Cla97C05G101280	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G101280	Watermelon (Charleston Gray)	wcgwmbB327
Cla97C05G101280	Watermelon (97103) v1	wmwmbB091
Cla97C05G101280	Watermelon (97103) v1	wmwmbB207