Cla97C05G098830 (gene) Watermelon (97103) v2

NameCla97C05G098830
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionRing finger protein, putative
LocationCla97Chr05 : 28020053 .. 28020475 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAGTTCGCTGTTATAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTGGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGAAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATGTAA

mRNA sequence

ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAGTTCGCTGTTATAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTGGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGAAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATGTAA

Coding sequence (CDS)

ATGGACTACAAAGAATTTCTGATGGATGGGTATTCCAGTAAACGAGTTCATATGGGAATTGTTTCTAGGAAGGGACTTGGTGTAGTTTTGAGGGATAACATGAAGCACGGGGATCAAAGTAATCAATACGATAACCGACTTGGCTGCACTGGCAGGATATGCTCCAGTAGTGGTGCAAAAGTTCGCTGTTATAATAAATCCAGCTCAAAAAGACCATTCCGCAGCTCAATTGGTAAAGAAGTTGTGGGAAGTTCCTCAAGTAGTTCCTCTGCAATCAGAAATCTCAGGAATTCTTTTCCATGGGCTTTTGGAAAGCTATCATCTAAGCTTGAAACAGATTCATCTGAAAATGATAGCATTCATGATGAGTTGGAAGAACTGGAATTCATCTCACCTCTTGGATTGCTCCATACGTTCATGTAA

Protein sequence

MDYKEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKSSSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEELEFISPLGLLHTFM
BLAST of Cla97C05G098830 vs. NCBI nr
Match: XP_022940547.1 (uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940548.1 uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940549.1 uncharacterized protein LOC111446115 [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 3.3e-48
Identity = 106/131 (80.92%), Postives = 114/131 (87.02%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKS 67
           MD YSSKRVHMGIVSRKG GVVLRDN+K+ DQSN+Y NRLGCTGRIC++SG +V C NK+
Sbjct: 1   MDEYSSKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRICTTSGVQVGCSNKT 60

Query: 68  SSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEEL 127
           SSKRPFRSS GKEVVGSSS SSSAIRNLR SFP  F KLSSKLETDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVVGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 128 EFISPLGLLHT 139
           EFISP  L HT
Sbjct: 121 EFISPPVLFHT 131

BLAST of Cla97C05G098830 vs. NCBI nr
Match: XP_022981972.1 (uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981973.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981974.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981975.1 uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981976.1 uncharacterized protein LOC111480963 [Cucurbita maxima])

HSP 1 Score: 199.5 bits (506), Expect = 7.4e-48
Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKS 67
           MD Y+SKRVHMGIVSRKG GVVLRDN+K+ DQSN+Y NRLGCTGRIC++SG +V C NK+
Sbjct: 1   MDEYASKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRICTTSGVQVGCSNKT 60

Query: 68  SSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEEL 127
           SSKRPFRSS GKEVVGSSS SSSAIRNLR SFP  F KLSSKLETDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVVGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 128 EFISPLGLLHT 139
           EFISP  L HT
Sbjct: 121 EFISPPVLFHT 131

BLAST of Cla97C05G098830 vs. NCBI nr
Match: XP_023524149.1 (uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524150.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524151.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524152.1 uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48
Identity = 104/131 (79.39%), Postives = 114/131 (87.02%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKS 67
           MD YSSKRVHMGIVSRKG GVVLRDN+K+ DQSN+Y NRLGCTGR+C++SG +V C NK+
Sbjct: 1   MDEYSSKRVHMGIVSRKGPGVVLRDNVKNRDQSNRYGNRLGCTGRVCTTSGVQVGCSNKT 60

Query: 68  SSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEEL 127
           SSKRPFRSS GKEV+GSSS SSSAIRNLR SFP  F KLSSKLETDSSENDSI D+LEEL
Sbjct: 61  SSKRPFRSSSGKEVLGSSSKSSSAIRNLRKSFPEPFAKLSSKLETDSSENDSIQDDLEEL 120

Query: 128 EFISPLGLLHT 139
           EFISP  L HT
Sbjct: 121 EFISPPVLFHT 131

BLAST of Cla97C05G098830 vs. NCBI nr
Match: KGN60171.1 (hypothetical protein Csa_3G881840 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 8.2e-47
Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0

Query: 1   MDYKEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAK 60
           +D KEFLMDGYSSKRVH+GIVSRKG GVVLRDNMKH DQSN+  NR GC GRICSSSGA+
Sbjct: 53  IDSKEFLMDGYSSKRVHVGIVSRKGPGVVLRDNMKHRDQSNKCSNRPGCNGRICSSSGAQ 112

Query: 61  VRCYNKSSSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSI 120
           V C +K SSKRPF SS GKE  G    SSS I+NLR SFP  FGKLSSKLETDSSENDSI
Sbjct: 113 VGCSSKFSSKRPFHSSSGKEGFG----SSSGIQNLRKSFPDPFGKLSSKLETDSSENDSI 172

Query: 121 HDELEELEFISPLGLLHT 139
            D+LEELEFISP GL HT
Sbjct: 173 QDDLEELEFISPHGLFHT 186

BLAST of Cla97C05G098830 vs. NCBI nr
Match: XP_023535824.1 (uncharacterized protein LOC111797139 [Cucurbita pepo subsp. pepo] >XP_023535825.1 uncharacterized protein LOC111797139 [Cucurbita pepo subsp. pepo] >XP_023535826.1 uncharacterized protein LOC111797139 [Cucurbita pepo subsp. pepo] >XP_023535827.1 uncharacterized protein LOC111797139 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 102/131 (77.86%), Postives = 110/131 (83.97%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKS 67
           MD Y SKRVH+GIVSRKG GVVLRDNMK  DQSN++ +RLGCTG+ICSSSGA+V C NK+
Sbjct: 1   MDEYCSKRVHVGIVSRKGPGVVLRDNMKQRDQSNRHGDRLGCTGKICSSSGAQVGCSNKA 60

Query: 68  SSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEEL 127
           SS R FRSS GKEVVG    SSSAIRN RNSFP  FGKLSSKLETDSS+NDSI DELEEL
Sbjct: 61  SSNRLFRSSSGKEVVG----SSSAIRNFRNSFPEPFGKLSSKLETDSSDNDSIQDELEEL 120

Query: 128 EFISPLGLLHT 139
           EF SP GLLHT
Sbjct: 121 EFTSPPGLLHT 127

BLAST of Cla97C05G098830 vs. TrEMBL
Match: tr|A0A0A0LJG2|A0A0A0LJG2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881840 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.4e-47
Identity = 106/138 (76.81%), Postives = 113/138 (81.88%), Query Frame = 0

Query: 1   MDYKEFLMDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAK 60
           +D KEFLMDGYSSKRVH+GIVSRKG GVVLRDNMKH DQSN+  NR GC GRICSSSGA+
Sbjct: 53  IDSKEFLMDGYSSKRVHVGIVSRKGPGVVLRDNMKHRDQSNKCSNRPGCNGRICSSSGAQ 112

Query: 61  VRCYNKSSSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSI 120
           V C +K SSKRPF SS GKE  G    SSS I+NLR SFP  FGKLSSKLETDSSENDSI
Sbjct: 113 VGCSSKFSSKRPFHSSSGKEGFG----SSSGIQNLRKSFPDPFGKLSSKLETDSSENDSI 172

Query: 121 HDELEELEFISPLGLLHT 139
            D+LEELEFISP GL HT
Sbjct: 173 QDDLEELEFISPHGLFHT 186

BLAST of Cla97C05G098830 vs. TrEMBL
Match: tr|A0A1S4E5I3|A0A1S4E5I3_CUCME (uncharacterized protein LOC103503755 OS=Cucumis melo OX=3656 GN=LOC103503755 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.6e-44
Identity = 101/131 (77.10%), Postives = 107/131 (81.68%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNKS 67
           MDGYSSKRVH+GIVSRKG GVVLRDNMK  DQSNQY NR GCTGRICSSSGA+V C +K 
Sbjct: 1   MDGYSSKRVHVGIVSRKGPGVVLRDNMKDRDQSNQYSNRPGCTGRICSSSGAQVGCSSKF 60

Query: 68  SSKRPFRSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELEEL 127
           SSKRPF SS GKE +G    SSS I+NLR SFP  FGKL SKLE DSSE+DSIHDELEEL
Sbjct: 61  SSKRPFCSSSGKEGLG----SSSGIQNLRKSFPDPFGKLPSKLEIDSSESDSIHDELEEL 120

Query: 128 EFISPLGLLHT 139
           E ISP GL HT
Sbjct: 121 ELISPHGLFHT 127

BLAST of Cla97C05G098830 vs. TrEMBL
Match: tr|A0A1Q3CCD5|A0A1Q3CCD5_CEPFO (Zf-RING_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21354 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19
Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = 0

Query: 8   MDGYSSKRVHMG-IVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNK 67
           MDGYS KR   G +VSRK  G+VLRD++K+ DQ+ Q+ NR+GC+GR+ S  GA V    K
Sbjct: 1   MDGYSGKRAAEGLVVSRKSTGLVLRDSVKNRDQNAQFCNRIGCSGRLNSIKGAHVGYAEK 60

Query: 68  SSSKRP-FR-SSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDEL 127
           S S RP FR SS GKE++GSSS + S + N R         LS +LETDSSE  S+ DE 
Sbjct: 61  SKSSRPAFRPSSSGKEIIGSSSRTCSTVSNARKISTSFRKNLSYQLETDSSETSSVQDEP 120

Query: 128 EELEFISPLG 135
           E  + I P G
Sbjct: 121 EASDLILPTG 130

BLAST of Cla97C05G098830 vs. TrEMBL
Match: tr|A0A2P4IE28|A0A2P4IE28_QUESU (Putative e3 ubiquitin-protein ligase hip1 OS=Quercus suber OX=58331 GN=CFP56_63908 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.8e-19
Identity = 65/129 (50.39%), Postives = 80/129 (62.02%), Query Frame = 0

Query: 8   MDGYSSKRVHMGI-VSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNK 67
           MD YS KRV  GI VSRKG G+ LR+N  + D + Q+ NR+GC GR  S+ G +  C  K
Sbjct: 1   MDEYSGKRVVDGIVVSRKGSGLALRENANNRDHNAQFCNRIGCNGRPNSARGVQYGCSEK 60

Query: 68  SSSKRPFR-SSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDELE 127
           +   RP R SS GKE++GSSS +SS I   R S      KLSS+LETDSSE  S+ DE E
Sbjct: 61  AKPSRPLRSSSSGKEIIGSSSKTSSVISKGRKSVTEPSKKLSSQLETDSSETSSVQDEPE 120

Query: 128 ELEFISPLG 135
             E  +P G
Sbjct: 121 VSELTAPPG 129

BLAST of Cla97C05G098830 vs. TrEMBL
Match: tr|A0A1U8LXD1|A0A1U8LXD1_GOSHI (E3 ubiquitin-protein ligase MBR2-like OS=Gossypium hirsutum OX=3635 GN=LOC107930835 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 0

Query: 8   MDGYSSKRVHMG-IVSRKGLGVVLRDNMKHGDQSNQYDNRLGCTGRICSSSGAKVRCYNK 67
           MDGY+SKR   G +V  KG G++L+D++ + +++ Q+ NR+GC+GR+ S  G    C  K
Sbjct: 1   MDGYTSKRAADGLVVPGKGSGIILKDHVNNRERNAQFCNRIGCSGRLNSMKGTLSGCSEK 60

Query: 68  SSSKRPF--RSSIGKEVVGSSSSSSSAIRNLRNSFPWAFGKLSSKLETDSSENDSIHDEL 127
           + S RP    SSIGKE++GSSS   SA  N R S      KLSS+LETDSSE  S+ DE 
Sbjct: 61  AKSSRPSYRTSSIGKEIIGSSSRVYSAPINSRKSSTNPQKKLSSQLETDSSETSSVQDEP 120

Query: 128 EELEFISPLG 135
           E  E ISP G
Sbjct: 121 EGSELISPPG 130

BLAST of Cla97C05G098830 vs. TAIR10
Match: AT5G24870.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.7e-10
Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0

Query: 8   MDGYSSKRVHMGIVSRKGLGVVLRDNMKHGDQSNQYD--NRLGCTGRICSSSGAKVRCYN 67
           MDG+  KR    I+ RK  G+VL +NMK  D  +     +R+GC+ R+ S+ G  +  + 
Sbjct: 1   MDGFKGKRTSRPIMPRKASGLVLHENMKKKDDKSVVPICSRIGCSSRVSSTKGDLID-HK 60

Query: 68  KSSSKRPFRSSI-GKEVVGSSSSSSSAIRNLRNSFPWAFGK--LSSKLETDSSENDSIHD 127
             ++   FRS + GKE VGSSS S S     + +     G+  LSS L+ DSSE+ S+++
Sbjct: 61  AKATVSSFRSPLSGKETVGSSSRSMSGFGGTKKASK-VIGRRQLSSLLDMDSSESSSVNE 120

Query: 128 ELEELEFISPLG 135
           +    E   P G
Sbjct: 121 DSPTSERSLPRG 130

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022940547.13.3e-4880.92uncharacterized protein LOC111446115 [Cucurbita moschata] >XP_022940548.1 unchar... [more]
XP_022981972.17.4e-4880.15uncharacterized protein LOC111480963 [Cucurbita maxima] >XP_022981973.1 uncharac... [more]
XP_023524149.19.7e-4879.39uncharacterized protein LOC111788150 [Cucurbita pepo subsp. pepo] >XP_023524150.... [more]
KGN60171.18.2e-4776.81hypothetical protein Csa_3G881840 [Cucumis sativus][more]
XP_023535824.11.3e-4477.86uncharacterized protein LOC111797139 [Cucurbita pepo subsp. pepo] >XP_023535825.... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LJG2|A0A0A0LJG2_CUCSA5.4e-4776.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881840 PE=4 SV=1[more]
tr|A0A1S4E5I3|A0A1S4E5I3_CUCME9.6e-4477.10uncharacterized protein LOC103503755 OS=Cucumis melo OX=3656 GN=LOC103503755 PE=... [more]
tr|A0A1Q3CCD5|A0A1Q3CCD5_CEPFO2.2e-1950.77Zf-RING_2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v... [more]
tr|A0A2P4IE28|A0A2P4IE28_QUESU2.8e-1950.39Putative e3 ubiquitin-protein ligase hip1 OS=Quercus suber OX=58331 GN=CFP56_639... [more]
tr|A0A1U8LXD1|A0A1U8LXD1_GOSHI1.4e-1848.46E3 ubiquitin-protein ligase MBR2-like OS=Gossypium hirsutum OX=3635 GN=LOC107930... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G24870.15.7e-1035.61RING/U-box superfamily protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
molecular_function GO:0061630 ubiquitin protein ligase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G098830.1Cla97C05G098830.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22937:SF53SUBFAMILY NOT NAMEDcoord: 8..130
NoneNo IPR availablePANTHERPTHR22937RING FINGER CONTAINING PROTEINcoord: 8..130

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla97C05G098830Cla97C08G155920Watermelon (97103) v2wmbwmbB148
The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G098830Wax gourdwgowmbB572
Cla97C05G098830Cucumber (Gy14) v1cgywmbB541
Cla97C05G098830Cucumber (Chinese Long) v2cuwmbB205
Cla97C05G098830Bottle gourd (USVL1VR-Ls)lsiwmbB285
Cla97C05G098830Melon (DHL92) v3.5.1mewmbB338
Cla97C05G098830Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G098830Watermelon (97103) v1wmwmbB207