Cla97C05G098380 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G098380
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	polyadenylate-binding protein-interacting protein 5
Location	Cla97Chr05 : 27572136 .. 27572882 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCACATGGATCATCTTTGAATCCGTATGCAACATCCTACATTCCAATCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCAGAAAACTCTTCGAGGGAAATTATCGGGGCTAACTTGCCGGGATATTCTGAACAGGGTGTATATAATCCTCCATATAGCAACATTTCCCCTCGTTTAAATATGCATTATGGTAAAAAGGCACCTGTTGCAGCTGATTCTGCTGTGAGGAATCACCCTTTTCATGGATCATTGTCACAACACAGTGGTGATTTGACAGAAATGGAGATGTTTGATAGAGAAGTTAACATGGATCTGGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAGTCCCTTACTGATGTCTATTTTGCTAACAAGGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGGTTTTCTCTATCTGCCCTCGTTCGATTTCTTGCTTTTATCTTAAACGGTTGTTTTAGTTACTACTGAACAAACTTGGTTGATGAACATTGTTTATTCTTGTGATTTGCATTATTTATAGCATCTATAATGATCTTTTGTTGGTTTAATTTGATATTTAGAACAAACATCCACCTGATGTCGAATATGACCCTGAAAGTCTCCCAGATACTTTGGACATCGGTGATATCTCCGAATCCGGGTTTGTAGCTGTCGATCAACCCTCTTTCAGAATGAAGAATGTAGCCAATGATGCAAGTACTTCATCCAGATTCTAG

mRNA sequence

ATGAAGCCACATGGATCATCTTTGAATCCGTATGCAACATCCTACATTCCAATCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCAGAAAACTCTTCGAGGGAAATTATCGGGGCTAACTTGCCGGGATATTCTGAACAGGGTGTATATAATCCTCCATATAGCAACATTTCCCCTCGTTTAAATATGCATTATGGTAAAAAGGCACCTGTTGCAGCTGATTCTGCTGTGAGGAATCACCCTTTTCATGGATCATTGTCACAACACAGTGGTGATTTGACAGAAATGGAGATGTTTGATAGAGAAGTTAACATGGATCTGGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAGTCCCTTACTGATGTCTATTTTGCTAACAAGGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGAACAAACATCCACCTGATGTCGAATATGACCCTGAAAGTCTCCCAGATACTTTGGACATCGGTGATATCTCCGAATCCGGGTTTGTAGCTGTCGATCAACCCTCTTTCAGAATGAAGAATGTAGCCAATGATGCAAGTACTTCATCCAGATTCTAG

Coding sequence (CDS)

ATGAAGCCACATGGATCATCTTTGAATCCGTATGCAACATCCTACATTCCAATCTCCCAGAGAGGGGCTAACAGAACTTTTATAGCAGAAAACTCTTCGAGGGAAATTATCGGGGCTAACTTGCCGGGATATTCTGAACAGGGTGTATATAATCCTCCATATAGCAACATTTCCCCTCGTTTAAATATGCATTATGGTAAAAAGGCACCTGTTGCAGCTGATTCTGCTGTGAGGAATCACCCTTTTCATGGATCATTGTCACAACACAGTGGTGATTTGACAGAAATGGAGATGTTTGATAGAGAAGTTAACATGGATCTGGAATTGCTTCAAGTCAGTTTCCCTGGACTATCTGAACAGTCCCTTACTGATGTCTATTTTGCTAACAAGGGTGATTTGGATGCTGCTATAGACATGCTGAGCCAGCTTGAGAACAAACATCCACCTGATGTCGAATATGACCCTGAAAGTCTCCCAGATACTTTGGACATCGGTGATATCTCCGAATCCGGGTTTGTAGCTGTCGATCAACCCTCTTTCAGAATGAAGAATGTAGCCAATGATGCAAGTACTTCATCCAGATTCTAG

Protein sequence

MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPRLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSFRMKNVANDASTSSRF

Homology

[Close]

BLAST of Cla97C05G098380 vs. NCBI nr
Match: XP_004136335.1 (PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis sativus] >KGN60127.1 hypothetical protein Csa_3G878960 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 2.2e-90
Identity = 174/196 (88.78%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSN-ISP 60
           MKPHGSSLNP+ATSYIP+SQRGANRTFI EN+SRE IGANLPGYSEQ VYNPPY+N ISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIGENTSRENIGANLPGYSEQCVYNPPYNNSISP 60

Query: 61  RLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           RLNM++GKKA VA  +AV+NHPF GSLSQ S DLTEMEMFDREVNMD+ELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAG-AAVKNHPFLGSLSQQSSDLTEMEMFDREVNMDIELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHP DVEYDPESLPDTLDIGDISESGFV VDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANDASTSSRF 196
           FRMKNVAN ASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of Cla97C05G098380 vs. NCBI nr
Match: XP_008466368.1 (PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 4.9e-90
Identity = 173/196 (88.27%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSN-ISP 60
           MKPHGSSLNP+ATSYIP+SQRGANRTFIAEN+SRE IGAN+PGYSEQ +Y PPY+N ISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLY-PPYNNSISP 60

Query: 61  RLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           RLNM++GKKA VAA SAV+NHPFHGSLSQ S DL+EME+FDREVNMDLELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHP DVEYD ESLPDTLDIGDISESGFV VDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANDASTSSRF 196
           FRMKNVAN ASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of Cla97C05G098380 vs. NCBI nr
Match: XP_022935877.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata])

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 141/196 (71.94%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKPHGSSLNPYATSYIPIS+R AN+ FIAE+SSRE IGANLPG SEQ +           
Sbjct: 16  MKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSEQKMCG--------- 75

Query: 61  LNMHYGKKAP-VAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           LN+  GKKAP  A  SAV+NHPFHGSLS+ + +  EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 76  LNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICFPGLSE 135

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFAN  DLDAA+DML+QLENKHP D EYDPESLPD+LDIGDISESGF A DQ S
Sbjct: 136 QSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 195

Query: 181 FRMKNVANDASTSSRF 196
            RMKNVA+ ASTS+RF
Sbjct: 196 SRMKNVASGASTSTRF 202

[Close]

BLAST of Cla97C05G098380 vs. NCBI nr
Match: XP_023536366.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 140/196 (71.43%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKPHGSSLNPYATSYIPIS+R AN+ FIAE+SSRE IGANLPG SEQ +           
Sbjct: 16  MKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSEQKMCG--------- 75

Query: 61  LNMHYGKKAP-VAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           LN+  GKKAP  A  SAV+NHPFHGSLS+ + +  EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 76  LNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICFPGLSE 135

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFAN  DLDAA+DML+QLE+KHP D EYDPESLPD+LDIGDISESGF A DQ S
Sbjct: 136 QSLTDVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 195

Query: 181 FRMKNVANDASTSSRF 196
            RMKNVA+ ASTS+RF
Sbjct: 196 SRMKNVASGASTSTRF 202

[Close]

BLAST of Cla97C05G098380 vs. NCBI nr
Match: XP_023524390.1 (polyadenylate-binding protein-interacting protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 3.8e-66
Identity = 135/196 (68.88%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP GSSLNPYATSYIP+S+R AN+TFI ENSSR  +GA +PGYSE  +YNP Y +ISP 
Sbjct: 1   MKPIGSSLNPYATSYIPLSKREANKTFIPENSSRGNVGAIIPGYSEHHIYNPQYDDISPF 60

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEME-MFDREVNMDLELLQVSFPGLSE 120
           LNMH G+KAP +  SAV+NHPFHG  S+     TEM  MF RE+ M+LELL  SFPGLS+
Sbjct: 61  LNMHRGEKAPGSVASAVKNHPFHGPSSRR----TEMAMMFGREMFMELELLHESFPGLSD 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QS+T+VYFANKGDLDAAIDML+QLENKH  D EY P+SLPD+LDIGDISESGF  V QPS
Sbjct: 121 QSITEVYFANKGDLDAAIDMLNQLENKHSADFEYAPQSLPDSLDIGDISESGFADVSQPS 180

Query: 181 FRMKNVANDASTSSRF 196
           FRMK+      TSSRF
Sbjct: 181 FRMKSANGGPGTSSRF 192

[Close]

BLAST of Cla97C05G098380 vs. TrEMBL
Match: tr|A0A0A0LHC3|A0A0A0LHC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.5e-90
Identity = 174/196 (88.78%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSN-ISP 60
           MKPHGSSLNP+ATSYIP+SQRGANRTFI EN+SRE IGANLPGYSEQ VYNPPY+N ISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIGENTSRENIGANLPGYSEQCVYNPPYNNSISP 60

Query: 61  RLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           RLNM++GKKA VA  +AV+NHPF GSLSQ S DLTEMEMFDREVNMD+ELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAG-AAVKNHPFLGSLSQQSSDLTEMEMFDREVNMDIELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHP DVEYDPESLPDTLDIGDISESGFV VDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANDASTSSRF 196
           FRMKNVAN ASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of Cla97C05G098380 vs. TrEMBL
Match: tr|A0A1S3CR41|A0A1S3CR41_CUCME (polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=LOC103503796 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.3e-90
Identity = 173/196 (88.27%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSN-ISP 60
           MKPHGSSLNP+ATSYIP+SQRGANRTFIAEN+SRE IGAN+PGYSEQ +Y PPY+N ISP
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLY-PPYNNSISP 60

Query: 61  RLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSE 120
           RLNM++GKKA VAA SAV+NHPFHGSLSQ S DL+EME+FDREVNMDLELLQVSFPGLSE
Sbjct: 61  RLNMNHGKKASVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120

Query: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPS 180
           QSLTDVYFANKGDLDAAIDMLSQLENKHP DVEYD ESLPDTLDIGDISESGFV VDQPS
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPS 180

Query: 181 FRMKNVANDASTSSRF 196
           FRMKNVAN ASTSSRF
Sbjct: 181 FRMKNVANQASTSSRF 195

[Close]

BLAST of Cla97C05G098380 vs. TrEMBL
Match: tr|A0A1R3G2N3|A0A1R3G2N3_COCAP (Ubiquitin system component Cue OS=Corchorus capsularis OX=210143 GN=CCACVL1_29256 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34
Identity = 93/193 (48.19%), Postives = 127/193 (65.80%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP  SSLNPYA SYIP+++R AN    A++S+R    A     S    ++  +S+ S  
Sbjct: 1   MKPGVSSLNPYAASYIPLAKREANDNLTAKDSNRGNEAAWFES-SSHFAHHQHHSSASLD 60

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQ 120
              H   K      S++++HP HGSL+Q+ G++TE ++ D E +MDLE L+++FPGLS +
Sbjct: 61  SVTHATGKHQTTEASSLKSHPAHGSLTQNPGEMTEKQVMDEEFDMDLEYLRMNFPGLSNE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSF 180
           SL DVY AN GDL+AA+DML+QLE      VE   E+LPDTLDIGD+SESG  A    S 
Sbjct: 121 SLMDVYLANHGDLEAAVDMLNQLEMY---TVE-SSETLPDTLDIGDVSESGSSATCS-SL 180

Query: 181 RMKNVANDASTSS 194
           ++KNVA +AS+SS
Sbjct: 181 KLKNVAGEASSSS 187

[Close]

BLAST of Cla97C05G098380 vs. TrEMBL
Match: tr|A0A0D2R2I2|A0A0D2R2I2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G053700 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 89/193 (46.11%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP  SSLNPYA SYIP+++R A+    A++       A     S    YNP  SN    
Sbjct: 1   MKPGVSSLNPYAASYIPLAKREASDNVTAKDIKHGNENAWFKP-SSHFAYNPQSSNAFLG 60

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQ 120
            + +  +K  VA  SAV++HP HGSL Q+ G++T+ ++ D E +MDLE L+++FPGLS +
Sbjct: 61  SSAYGTEKHQVAEGSAVKSHPAHGSLMQNPGEMTDKQIVDEEFDMDLEYLRMTFPGLSNE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSF 180
           SL DVY AN GD +A +DML+QLE  H  +     E+LPDTLDIGD+SESG  A      
Sbjct: 121 SLLDVYLANDGDFEATVDMLNQLE-MHTVE---SSETLPDTLDIGDVSESGSSAT-CVGL 180

Query: 181 RMKNVANDASTSS 194
           ++KN+A + S SS
Sbjct: 181 KLKNMAGETSASS 187

[Close]

BLAST of Cla97C05G098380 vs. TrEMBL
Match: tr|A0A0D2U9I1|A0A0D2U9I1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G053700 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 89/193 (46.11%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP  SSLNPYA SYIP+++R A+    A++       A     S    YNP  SN    
Sbjct: 4   MKPGVSSLNPYAASYIPLAKREASDNVTAKDIKHGNENAWFKP-SSHFAYNPQSSNAFLG 63

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQ 120
            + +  +K  VA  SAV++HP HGSL Q+ G++T+ ++ D E +MDLE L+++FPGLS +
Sbjct: 64  SSAYGTEKHQVAEGSAVKSHPAHGSLMQNPGEMTDKQIVDEEFDMDLEYLRMTFPGLSNE 123

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSF 180
           SL DVY AN GD +A +DML+QLE  H  +     E+LPDTLDIGD+SESG  A      
Sbjct: 124 SLLDVYLANDGDFEATVDMLNQLE-MHTVE---SSETLPDTLDIGDVSESGSSAT-CVGL 183

Query: 181 RMKNVANDASTSS 194
           ++KN+A + S SS
Sbjct: 184 KLKNMAGETSASS 190

[Close]

BLAST of Cla97C05G098380 vs. Swiss-Prot
Match: sp|Q6NQH9|CID6_ARATH (Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3702 GN=CID6 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-17
Identity = 69/198 (34.85%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSR-----EIIGANLPGYSEQGVYNPPYS 60
           MK   S+LNPYA +Y+P+S+R  +       + +             GY  QG+ +   +
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGSLVDTKPVTQQXXXXXXXXXXXXXGYGVQGMGSYQGT 60

Query: 61  NISPRLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFP 120
            +SP       KK+P      V NH              +++  D E++MD+E L  ++P
Sbjct: 61  QMSP-------KKSP---SEMVYNH--------------QLKDEDLEMDMDIEYLLATYP 120

Query: 121 GLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAV 180
           GLS++S+ DVY AN  DLDA I+ML+QLE       EY    LPDTLDIGD+ E     +
Sbjct: 121 GLSQESINDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----I 165

Query: 181 DQPSFRMKNVANDASTSS 194
              S + KN  + AS+SS
Sbjct: 181 ITESSKQKNDGSSASSSS 165

[Close]

BLAST of Cla97C05G098380 vs. Swiss-Prot
Match: sp|Q9LYE5|CID5_ARATH (Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3702 GN=CID5 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 66/193 (34.20%), Postives = 90/193 (46.63%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP   +LNP+A SY+PIS+R                     G  + G+    ++  SP 
Sbjct: 1   MKPGAFALNPHAASYVPISKRVDY------------------GGGDDGLV---FAAKSPT 60

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQ 120
           + +   KK+   A   +R+               +              L V+F GLS++
Sbjct: 61  VEVSMPKKSSEMAYKQIRD---------------DDXXXXXXXXXXXXYLLVTFSGLSQE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSF 180
           S+TDVY AN GDL+A I+ML+QLE           E+LP+TLDIGDISESG      PS 
Sbjct: 121 SITDVYLANGGDLEATIEMLNQLEIYSTE----SEENLPETLDIGDISESG------PS- 146

Query: 181 RMKNVANDASTSS 194
             K+    ASTSS
Sbjct: 181 TSKSTEVAASTSS 146

[Close]

BLAST of Cla97C05G098380 vs. Swiss-Prot
Match: sp|O64843|CID7_ARATH (Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana OX=3702 GN=CID7 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.7e-04
Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 80  HPFHGSLSQHS--GDLTEMEMFDREVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAI 139
           +PF G  S+H    D+      D EVN  ++ L   FPG + +SL +VYFAN  DL   I
Sbjct: 194 NPFSGK-SRHGFVNDMITESPGDMEVN-PVDFLASQFPGFAAESLAEVYFANGCDLQLTI 253

Query: 140 DMLSQLE-------NKHPPDVEYDPESL 159
           +ML+QLE       N++     Y P SL
Sbjct: 254 EMLTQLELQVDGGLNQNISPKTYAPPSL 279

[Close]

BLAST of Cla97C05G098380 vs. TAIR10
Match: AT5G25540.1 (CTC-interacting domain 6)

HSP 1 Score: 91.3 bits (225), Expect = 7.2e-19
Identity = 69/198 (34.85%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSR-----EIIGANLPGYSEQGVYNPPYS 60
           MK   S+LNPYA +Y+P+S+R  +       + +             GY  QG+ +   +
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGSLVDTKPVTQQXXXXXXXXXXXXXGYGVQGMGSYQGT 60

Query: 61  NISPRLNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFP 120
            +SP       KK+P      V NH              +++  D E++MD+E L  ++P
Sbjct: 61  QMSP-------KKSP---SEMVYNH--------------QLKDEDLEMDMDIEYLLATYP 120

Query: 121 GLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAV 180
           GLS++S+ DVY AN  DLDA I+ML+QLE       EY    LPDTLDIGD+ E     +
Sbjct: 121 GLSQESINDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----I 165

Query: 181 DQPSFRMKNVANDASTSS 194
              S + KN  + AS+SS
Sbjct: 181 ITESSKQKNDGSSASSSS 165

[Close]

BLAST of Cla97C05G098380 vs. TAIR10
Match: AT5G11440.1 (CTC-interacting domain 5)

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-14
Identity = 66/193 (34.20%), Postives = 90/193 (46.63%), Query Frame = 0


Query: 1   MKPHGSSLNPYATSYIPISQRGANRTFIAENSSREIIGANLPGYSEQGVYNPPYSNISPR 60
           MKP   +LNP+A SY+PIS+R                     G  + G+    ++  SP 
Sbjct: 1   MKPGAFALNPHAASYVPISKRVDY------------------GGGDDGLV---FAAKSPT 60

Query: 61  LNMHYGKKAPVAADSAVRNHPFHGSLSQHSGDLTEMEMFDREVNMDLELLQVSFPGLSEQ 120
           + +   KK+   A   +R+               +              L V+F GLS++
Sbjct: 61  VEVSMPKKSSEMAYKQIRD---------------DDXXXXXXXXXXXXYLLVTFSGLSQE 120

Query: 121 SLTDVYFANKGDLDAAIDMLSQLENKHPPDVEYDPESLPDTLDIGDISESGFVAVDQPSF 180
           S+TDVY AN GDL+A I+ML+QLE           E+LP+TLDIGDISESG      PS 
Sbjct: 121 SITDVYLANGGDLEATIEMLNQLEIYSTE----SEENLPETLDIGDISESG------PS- 146

Query: 181 RMKNVANDASTSS 194
             K+    ASTSS
Sbjct: 181 TSKSTEVAASTSS 146

[Close]

BLAST of Cla97C05G098380 vs. TAIR10
Match: AT2G26280.1 (CTC-interacting domain 7)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05
Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 0


Query: 80  HPFHGSLSQHS--GDLTEMEMFDREVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAI 139
           +PF G  S+H    D+      D EVN  ++ L   FPG + +SL +VYFAN  DL   I
Sbjct: 194 NPFSGK-SRHGFVNDMITESPGDMEVN-PVDFLASQFPGFAAESLAEVYFANGCDLQLTI 253

Query: 140 DMLSQLE-------NKHPPDVEYDPESL 159
           +ML+QLE       N++     Y P SL
Sbjct: 254 EMLTQLELQVDGGLNQNISPKTYAPPSL 279

The following BLAST results are available for this feature:

BLAST of Cla97C05G098380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136335.1	2.2e-90	88.78	PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis sativus]...	[more]
XP_008466368.1	4.9e-90	88.27	PREDICTED: polyadenylate-binding protein-interacting protein 5 [Cucumis melo]	[more]
XP_022935877.1	4.0e-68	71.94	polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata]	[more]
XP_023536366.1	1.5e-67	71.43	polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. ...	[more]
XP_023524390.1	3.8e-66	68.88	polyadenylate-binding protein-interacting protein 6-like [Cucurbita pepo subsp. ...	[more]

BLAST of Cla97C05G098380 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHC3\|A0A0A0LHC3_CUCSA	1.5e-90	88.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV=1	[more]
tr\|A0A1S3CR41\|A0A1S3CR41_CUCME	3.3e-90	88.27	polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1R3G2N3\|A0A1R3G2N3_COCAP	1.5e-34	48.19	Ubiquitin system component Cue OS=Corchorus capsularis OX=210143 GN=CCACVL1_2925...	[more]
tr\|A0A0D2R2I2\|A0A0D2R2I2_GOSRA	1.4e-32	46.11	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G053700 PE=4 ...	[more]
tr\|A0A0D2U9I1\|A0A0D2U9I1_GOSRA	1.4e-32	46.11	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_010G053700 PE=4 ...	[more]

BLAST of Cla97C05G098380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NQH9\|CID6_ARATH	1.3e-17	34.85	Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q9LYE5\|CID5_ARATH	1.3e-12	34.20	Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3...	[more]
sp\|O64843\|CID7_ARATH	3.7e-04	38.64	Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cla97C05G098380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25540.1	7.2e-19	34.85	CTC-interacting domain 6	[more]
AT5G11440.1	7.0e-14	34.20	CTC-interacting domain 5	[more]
AT2G26280.1	2.0e-05	38.64	CTC-interacting domain 7	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf
IPR038981	CID5/CID6
IPR003892	CUE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G098380.1	Cla97C05G098380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003892	Ubiquitin system component Cue	PFAM	PF02845	CUE	coord: 108..143 e-value: 4.1E-5 score: 23.1
IPR003892	Ubiquitin system component Cue	PROSITE	PS51140	CUE	coord: 102..145 score: 12.496
None	No IPR available	GENE3D	G3DSA:1.10.8.10		coord: 102..149 e-value: 1.2E-5 score: 26.7
None	No IPR available	CDD	cd14371	CUE_CID7_like	coord: 104..146 e-value: 2.54654E-17 score: 71.522
IPR038981	Polyadenylate-binding protein-interacting protein 5/6	PANTHER	PTHR37252	FAMILY NOT NAMED	coord: 1..193
IPR009060	UBA-like superfamily	SUPERFAMILY	SSF46934	UBA-like	coord: 102..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G098380	Cla020944	Watermelon (97103) v1	wmwmbB207
Cla97C05G098380	Csa3G878960	Cucumber (Chinese Long) v2	cuwmbB205
Cla97C05G098380	MELO3C003669	Melon (DHL92) v3.5.1	mewmbB338
Cla97C05G098380	ClCG05G017210	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G098380	CSPI03G44220	Wild cucumber (PI 183967)	cpiwmbB210
Cla97C05G098380	Cucsa.310610	Cucumber (Gy14) v1	cgywmbB541
Cla97C05G098380	CmaCh01G015290	Cucurbita maxima (Rimu)	cmawmbB475
Cla97C05G098380	CmaCh09G004810	Cucurbita maxima (Rimu)	cmawmbB027
Cla97C05G098380	CmoCh09G004860	Cucurbita moschata (Rifu)	cmowmbB015
Cla97C05G098380	CmoCh01G015800	Cucurbita moschata (Rifu)	cmowmbB457
Cla97C05G098380	Lsi04G021580	Bottle gourd (USVL1VR-Ls)	lsiwmbB285
Cla97C05G098380	CsGy3G041720	Cucumber (Gy14) v2	cgybwmbB197
Cla97C05G098380	MELO3C003669.2	Melon (DHL92) v3.6.1	medwmbB325
Cla97C05G098380	Carg02902	Silver-seed gourd	carwmbB0659
Cla97C05G098380	Carg00478	Silver-seed gourd	carwmbB0696
Cla97C05G098380	CsaV3_3G046690	Cucumber (Chinese Long) v3	cucwmbB207
Cla97C05G098380	Bhi09G001961	Wax gourd	wgowmbB572

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G098380	Watermelon (97103) v2	wmbwmbB148
Cla97C05G098380	Silver-seed gourd	carwmbB1031
Cla97C05G098380	Cucumber (Gy14) v2	cgybwmbB134
Cla97C05G098380	Cucumber (Gy14) v1	cgywmbB278
Cla97C05G098380	Cucurbita maxima (Rimu)	cmawmbB185
Cla97C05G098380	Cucurbita moschata (Rifu)	cmowmbB170
Cla97C05G098380	Wild cucumber (PI 183967)	cpiwmbB143
Cla97C05G098380	Cucumber (Chinese Long) v3	cucwmbB138
Cla97C05G098380	Cucumber (Chinese Long) v2	cuwmbB140
Cla97C05G098380	Melon (DHL92) v3.6.1	medwmbB284
Cla97C05G098380	Melon (DHL92) v3.6.1	medwmbB324
Cla97C05G098380	Melon (DHL92) v3.5.1	mewmbB294
Cla97C05G098380	Melon (DHL92) v3.5.1	mewmbB337
Cla97C05G098380	Watermelon (Charleston Gray)	wcgwmbB331
Cla97C05G098380	Watermelon (97103) v1	wmwmbB094
Cla97C05G098380	Wax gourd	wgowmbB304