Cla97C05G097070 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G097070
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	spindle and kinetochore-associated protein 2
Location	Cla97Chr05 : 26423542 .. 26427294 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCGTAAGATCAACACGATCTCTTTCTTTTTCTTCTTCTTCTTCTTCTTCTCGTTGATTGAATCAAGGCACTAATTAGATTAAGGAGGAAGTTCTAGGGCGTGAAATGAATGTGGAATTGTTTATTTCTCTCTTTCATGTTGGTATTTCACAGTGCAAGTACCAGATCTTTGAGCTTAATGTAGAATTACTTCATTCTACAGCGTGAGAGCATCATTGGCTTTCTCTATCTTCTTAATCGAGGCACTGTTTGGTTTGAGGATGGAGTTGGAGATCTGGAGCTCAATGTTTGACCTATTTTGTTCTTTCTTTGCCGTTATTTCACTGTACTAACACAAGATCATGAGCTTAATTTAGAATTATTCAATTCGAATGCGTAGGAGCAAGTAATTTATCCTGACACAGTAAGAGCAACATACGTTTTCCTTCTTCTAATTCTCCTTCTGATTGGAGGCACTATTTGGATTGAGGAGGACATACGAGTTCTTGAGCTTTTCGGAAAATTTGTTCACCCATAATTTCTTTTCATCTTCGAAATTCTGATTCTAGTAAGCTTTTTGATGCTCAGTAAAATGTCTGATTATTGCTGTTCGTTTCTCTACTATGTATGCAACTATGTGACAGTGAAAATGGATTCAAACACTCTTTATGATAGAGGTTGTTTGGCCTTTGTTTGACGGTTGAGATTAGAAATCCTCTTAGAACATATAATGGGCACGGGGCTTAAATATGTCAGTAGAAAGTATATGTCGCGGCAGCACAAAGTTAACCACGTATTAACGTGGAATTCGATCTCATATTTTCTTTCATATTCTTTCTAGAAAAATACAAATATGAATCTGTTGTTGATCAGGTGGTGGTCTTCATTCAAGATTTTGTGAATTGTTTGCAGGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGTACTTTTCTTCATTTACTTTCTTTGGAAAAGTATTGACTAGAGGAAACACACGCATTTACTTTTCCTCATCTTTTTTTTCTTTCTTCCAAGAATTAGTCGTCAACTCCATTTCACTTAGATTCCATGTGATGAAATGTTGATATATTATATCTAGAAAAATGAAAATATGAAGTTTGGGAATGTGATGGCTGATGATAACAGGATGAATGTATTTAGTGGGTGGAAATGTGATCTAGATTTTTATCATATATAACTTAAAATCTAATGATATGTTTCATAATATTTATATCGAGAATATTTTGTTTAACATATTACGCACACTGTATTCAAAATTATTTCTAGCAAATAATTTTAATTGAAACTAAGGTTTCTTTCAATAACCATTTTATTTTTAGTTTTAGGATTTTAAAATTTATGTTGGTTCGTTCTCAATATTTTTTACTATGGTTTTCACTTTTCTTAGAGAAATATTTGAACTCTTAGTCAAATACCCAAAATAAAAATAAGTTTTTAAAACTACTTTTTTAAGTTTTCAAAATTTGGTTTAGAATAATATTGGTAGGATGTGGAATGACAAAACAAAGGAACTTATAGGTAGGATGGTAGTGTAAAGTGTTTATAAGCTTAATTTTTAAAAATTAAAACTAAGACCCTCTTTAAAAATCATTTGATTTGTATTTATTTTTGTTTTCTTTTCTTTTGAAAATAAAACTACTATTCCAGCAAAAACTAAGTCAAGTTTTGATAGAAAAAAAGAATTTTAGCGAACGTCTTGATAGTTGGCGCATCTTTTACTCTTCTATCGGAGGGCAAGGATTGAGATAGACATTGGTAATTGGAGCAAACTGAAGTCGATTGATCCCGATACCTACTACTTATTATTTCTAGGAGGAATGACCCTGACATGTACTGTAGTTATTCTTGTTCTGGAACTGATATTCAGTGATTTCAATACCTATTGCTAATTTATGCAACGACGATGTGCTGTTCAATTACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGGTATTCATTGTTAATGTCCCTTGGTTTGCATTTTGTGGTCAGTACTCGTACAACGCATTGATTATTCCTTTGGCATAAGCCTGAATTTTTGGAACTCCTCTTCTCTGTGTCATTTCGTTTTCCACTTAACTAGTACAAGGTTTTTATTTATTCAAAATTTTGTTCTTCTTTAGCTATTGGAAAGATTACACAGTAAAATGGACATTTTAGCTATTTTTGTCTCAAGTGTTCTATCATCTGCTTTATTGTGATTTAACAGGGTTGCAATTTCCAAATGGTGCTTATAGTGTTTGTACCATTTGCCAGCAAGCAACCAATATTAAATATGCAAAAGGCTTTTCTTACGATTGAATATCCACATTAGAGAGTATGTGGGTCTTTCGATCTCTTGAATAAAGCGTACACAACCAAATGTCTCACCCTCTCCATGTAGAAGCGTCGTGTTTTTAAGTACTTGCAGAGTCATTGTTTAATGCTAAACCATTTCCTGATTTCCTCTCCTGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGGTACGGATTCTTTTCAAGCTTTCTACAGACATTTCTGATAAAAGTAAATTGTTTGTGCTTCTTGTTTGCAAAAGTGGTATGTATATTTCGTTACTTGCTCCTTTACCATCTACATTTAGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGTGGAGTCATCAAACTTATTCCGAAGTCCGACAATATAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAATTGAACTTTGCTCATAGTGGCATTATTAATGTTTAGACTTAAACTACCTCTTAAATTCTAGCTATGAAAATAAAAAATATATATATATATATTAGATTCCATGGCGATGACTCTAAAAAGTTCATTAACGGTTTGATGAGGCGAATTAGAAAATGGTTAGTATATTTTAATTAATATTTAGTTTAGTTATTAACTCAGTATTTAGTGTTTTAGAATTAATTAGTTAATTGAAATAGCCATTTAAGGTTTGTAATAGAAATCCTTTGAATATTCATTTTTAATATAGAACTTATGTTATTGGAGAATTTCTCTTAAAGGGAAGCAATGGACTTTCCTTGCTTGGTCATGGATTTGGTCTTAATACCTATCTATACCTGCTAGTTGCATCACAATTGCATTTGCTGCCACGTAGAAACTAAAGTTTGTGTGTTCTTTCTTGCTTTACCTTCATTGTGCTTTCCATGAAAGTGATGGGAATTATGAATTTTTTCTTTTCACAGATTATGAATGAAAGATCAAACTATCTTTCAAGATGGTAATTAGAATCTTATTTGTTAATTTGTCTGTTGGCTGGCGCTAATGCAGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAGTGCAGGCATGA

mRNA sequence

ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAGTGCAGGCATGA

Coding sequence (CDS)

ATGGGGCTCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCCAATCACGATCTCTCGGTGGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATTTATCCCGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAAATACGAGATGATATATCAACCTTGAAAGAGCAGTGTCGTGAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCGTCCCCTTTGTGAGCGATCTCGATGATCCTGCATTTGCGCAATTCAAGCAGATCACTGAAGAGTGGACGACACAAGTTCAATCAAAATTTGAACCAGAATTCCAAATTTCAACCTTCCCGGTAAAAATGCAAGTCACGACCGGTGGAACCACCGATTACAGGATTTTTTCCCCTCATGTGGCAGGGGAAGACGGCCAAGAGGACGCGGACTGTGATGACGTCAACAAGTTGCTATTCTCGGCGGTAGTGCAGGCATGA

Protein sequence

MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA

Homology

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BLAST of Cla97C05G097070 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 4.6e-69
Identity = 144/186 (77.42%), Postives = 146/186 (78.49%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNM+ KMQASMG PFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMVHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLL 180
           TEEWTTQVQSK                                GEDGQEDA+  DVNKLL
Sbjct: 121 TEEWTTQVQSKI-------------------------------GEDGQEDAESSDVNKLL 155

Query: 181 FSAVVQ 187
           FSAVVQ
Sbjct: 181 FSAVVQ 155

[Close]

BLAST of Cla97C05G097070 vs. NCBI nr
Match: XP_004145489.1 (PREDICTED: spindle and kinetochore-associated protein 2 isoform X1 [Cucumis sativus] >XP_011654215.1 PREDICTED: spindle and kinetochore-associated protein 2 isoform X1 [Cucumis sativus] >KGN55411.1 hypothetical protein Csa_4G651780 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 143/188 (76.06%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60
           MG+D HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQ 120
           DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNMLQKMQASMG+PFVSDLDDPAF++FKQ
Sbjct: 61  DDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLDDPAFSEFKQ 120

Query: 121 ITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKL 180
           ITEEWTTQVQSKF                              +GEDGQEDADC+DVNKL
Sbjct: 121 ITEEWTTQVQSKF------------------------------SGEDGQEDADCNDVNKL 158

Query: 181 LFSAVVQA 188
           LFSAVVQA
Sbjct: 181 LFSAVVQA 158

[Close]

BLAST of Cla97C05G097070 vs. NCBI nr
Match: XP_022141272.1 (spindle and kinetochore-associated protein 2 [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 142/185 (76.76%), Postives = 148/185 (80.00%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           MGL HLHQHHQAADGL NLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD
Sbjct: 1   MGLHHLHQHHQAADGLANLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQI 120
           DISTL+EQCRE+LMAKQDVIDKARTVLVGNRNMLQKMQASMG+P VSDLDD AFAQFK+I
Sbjct: 61  DISTLQEQCREILMAKQDVIDKARTVLVGNRNMLQKMQASMGIPLVSDLDDHAFAQFKKI 120

Query: 121 TEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLL 180
           TEEWTTQVQSK                                G+DGQEDAD +DVNKLL
Sbjct: 121 TEEWTTQVQSKI-------------------------------GDDGQEDADSNDVNKLL 154

Query: 181 FSAVV 186
           FSAVV
Sbjct: 181 FSAVV 154

[Close]

BLAST of Cla97C05G097070 vs. NCBI nr
Match: XP_008452819.1 (PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 5.1e-68
Identity = 143/188 (76.06%), Postives = 150/188 (79.79%), Query Frame = 0


Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60
           MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQASMG+PFVSDLDDPA A+FKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKL 180
           ITEEWTTQVQSKF                               GED QEDADC +VNKL
Sbjct: 121 ITEEWTTQVQSKF-------------------------------GEDAQEDADCSNVNKL 157

Query: 181 LFSAVVQA 188
           LFSAVVQA
Sbjct: 181 LFSAVVQA 157

[Close]

BLAST of Cla97C05G097070 vs. NCBI nr
Match: XP_023534877.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 8.7e-68
Identity = 143/186 (76.88%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MGLDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRD 60
           M LD LHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKL  RIKKIRD
Sbjct: 1   MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRD 60

Query: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQI 120
           DISTLKEQCREVLMAKQDVIDKARTVLVGNRNML KMQASMG PFVSD DDPAF QFKQI
Sbjct: 61  DISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLHKMQASMGKPFVSDDDDPAFVQFKQI 120

Query: 121 TEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLL 180
           TEEWTTQVQSK                                GEDGQEDA+  DVNKLL
Sbjct: 121 TEEWTTQVQSKI-------------------------------GEDGQEDAESSDVNKLL 155

Query: 181 FSAVVQ 187
           FSAVVQ
Sbjct: 181 FSAVVQ 155

[Close]

BLAST of Cla97C05G097070 vs. TrEMBL
Match: tr|A0A0A0L5I9|A0A0A0L5I9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.8e-69
Identity = 143/188 (76.06%), Postives = 154/188 (81.91%), Query Frame = 0


Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60
           MG+D HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQ 120
           DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNMLQKMQASMG+PFVSDLDDPAF++FKQ
Sbjct: 61  DDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLDDPAFSEFKQ 120

Query: 121 ITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKL 180
           ITEEWTTQVQSKF                              +GEDGQEDADC+DVNKL
Sbjct: 121 ITEEWTTQVQSKF------------------------------SGEDGQEDADCNDVNKL 158

Query: 181 LFSAVVQA 188
           LFSAVVQA
Sbjct: 181 LFSAVVQA 158

[Close]

BLAST of Cla97C05G097070 vs. TrEMBL
Match: tr|A0A1S3BUQ8|A0A1S3BUQ8_CUCME (spindle and kinetochore-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103493729 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.4e-68
Identity = 143/188 (76.06%), Postives = 150/188 (79.79%), Query Frame = 0


Query: 1   MGLD-HLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIR 60
           MG+D HLHQHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+
Sbjct: 1   MGIDHHLHQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQ 60

Query: 61  DDISTLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQ 120
           DDISTLKEQCREVL AKQDVIDKARTVL+GNRNMLQKMQASMG+PFVSDLDDPA A+FKQ
Sbjct: 61  DDISTLKEQCREVLTAKQDVIDKARTVLLGNRNMLQKMQASMGIPFVSDLDDPALAEFKQ 120

Query: 121 ITEEWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKL 180
           ITEEWTTQVQSKF                               GED QEDADC +VNKL
Sbjct: 121 ITEEWTTQVQSKF-------------------------------GEDAQEDADCSNVNKL 157

Query: 181 LFSAVVQA 188
           LFSAVVQA
Sbjct: 181 LFSAVVQA 157

[Close]

BLAST of Cla97C05G097070 vs. TrEMBL
Match: tr|A0A2I4G6M5|A0A2I4G6M5_9ROSI (spindle and kinetochore-associated protein 2 isoform X2 OS=Juglans regia OX=51240 GN=LOC109005193 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 106/184 (57.61%), Postives = 133/184 (72.28%), Query Frame = 0


Query: 3   LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDI 62
           ++H H+HHQA D L NLFTKANHDL+VVQ+RLEKEFQQ+YPD+ANPMKLVSRIKKI++D+
Sbjct: 1   MEHSHEHHQATDSLVNLFTKANHDLTVVQHRLEKEFQQVYPDNANPMKLVSRIKKIQEDL 60

Query: 63  STLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQITE 122
            TLKEQC E+L AKQD+IDKA+T LVGNR++LQ+MQAS+G+PF SD DDPA+A F Q+ +
Sbjct: 61  LTLKEQCHELLAAKQDLIDKAQTTLVGNRSLLQRMQASVGIPFTSDSDDPAYANFNQVVD 120

Query: 123 EWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLLFS 182
           EW  QV+S+                 TG               D Q ++D  D+NKLLFS
Sbjct: 121 EWAVQVRSR-----------------TG---------------DEQHESDSKDINKLLFS 152

Query: 183 AVVQ 187
           A+VQ
Sbjct: 181 AIVQ 152

[Close]

BLAST of Cla97C05G097070 vs. TrEMBL
Match: tr|A0A2I4G6M6|A0A2I4G6M6_9ROSI (spindle and kinetochore-associated protein 2 isoform X1 OS=Juglans regia OX=51240 GN=LOC109005193 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 106/190 (55.79%), Postives = 135/190 (71.05%), Query Frame = 0


Query: 3   LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDI 62
           ++H H+HHQA D L NLFTKANHDL+VVQ+RLEKEFQQ+YPD+ANPMKLVSRIKKI++D+
Sbjct: 1   MEHSHEHHQATDSLVNLFTKANHDLTVVQHRLEKEFQQVYPDNANPMKLVSRIKKIQEDL 60

Query: 63  STLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQI-- 122
            TLKEQC E+L AKQD+IDKA+T LVGNR++LQ+MQAS+G+PF SD DDPA+A F Q+  
Sbjct: 61  LTLKEQCHELLAAKQDLIDKAQTTLVGNRSLLQRMQASVGIPFTSDSDDPAYANFNQVAF 120

Query: 123 --TEEWT--TQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDV 182
             +  W+  T  Q   + E     F   +  T+    D           D Q ++D  D+
Sbjct: 121 FPSGVWSVCTTCQQATKIEHMAGLF--LLGNTSENVVDEWAVQVRSRTGDEQHESDSKDI 180

Query: 183 NKLLFSAVVQ 187
           NKLLFSA+VQ
Sbjct: 181 NKLLFSAIVQ 188

[Close]

BLAST of Cla97C05G097070 vs. TrEMBL
Match: tr|A0A1U8P8Y9|A0A1U8P8Y9_GOSHI (spindle and kinetochore-associated protein 2 OS=Gossypium hirsutum OX=3635 GN=LOC107956580 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.9e-47
Identity = 103/179 (57.54%), Postives = 124/179 (69.27%), Query Frame = 0


Query: 9   HHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDISTLKEQ 68
           HHQAAD L NLFTKANHDL VVQYRLEKEFQQIYPD+ANPMKLVSRIKKI++++S+L EQ
Sbjct: 13  HHQAADNLVNLFTKANHDLLVVQYRLEKEFQQIYPDNANPMKLVSRIKKIQEELSSLTEQ 72

Query: 69  CREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQITEEWTTQV 128
           CRE+L AKQD+IDKART+LVGNRN+LQ+MQAS G    SD DDPA   F QI +EWT QV
Sbjct: 73  CRELLSAKQDLIDKARTILVGNRNLLQRMQASTGTSLTSDSDDPALTNFNQIIDEWTDQV 132

Query: 129 QSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLLFSAVVQA 188
           +S+                                  D   +++ +D+NKLLFSA+VQ+
Sbjct: 133 RSRI--------------------------------GDQMRESEPEDINKLLFSAIVQS 159

[Close]

BLAST of Cla97C05G097070 vs. Swiss-Prot
Match: sp|Q8WVK7|SKA2_HUMAN (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.2e-05
Identity = 29/88 (32.95%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCR 73
          D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  I+    TL  + +
Sbjct: 6  DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSVIKSRYQTLYARFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNMLQKMQ 99
           V + +++   +    +    NM+QK+Q
Sbjct: 66 PVAVEQKESKSRICATVKKTMNMIQKLQ 93

[Close]

BLAST of Cla97C05G097070 vs. Swiss-Prot
Match: sp|Q4R8E8|SKA2_MACFA (Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 27/88 (30.68%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCR 73
          D L  +F KA  DL  +QYRLE E +  +PDSA   NP+ L+  +  ++    TL  + +
Sbjct: 6  DKLELMFQKAESDLDYIQYRLEYEIKTNHPDSASEKNPVTLLKELSALKSRYQTLYARFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNMLQKMQ 99
           V + +++   +    +    N++QK+Q
Sbjct: 66 PVAVEQKETKSRICATVNKTMNVIQKLQ 93

[Close]

BLAST of Cla97C05G097070 vs. Swiss-Prot
Match: sp|Q2TBY0|SKA2_BOVIN (Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-04
Identity = 30/90 (33.33%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 14 DGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSA---NPMKLVSRIKKIRDDISTLKEQCR 73
          D L  +F KA+ DL  +QYRLE E +  YPDSA   NP+ L+  +  I+    TL  + +
Sbjct: 6  DKLELMFQKADSDLDYIQYRLEYEIKTNYPDSAGKKNPVTLLKELSAIKSRYQTLHVRFK 65

Query: 74 EVLMAKQDVIDKARTVLVGNRNM--LQKMQ 99
           + + +++   K+R     N+ M  +Q++Q
Sbjct: 66 PIAVEQKET--KSRICATFNKTMTLIQELQ 93

[Close]

BLAST of Cla97C05G097070 vs. TAIR10
Match: AT2G24970.1 (unknown protein)

HSP 1 Score: 159.5 bits (402), Expect = 2.1e-39
Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 3   LDHLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLVSRIKKIRDDI 62
           + H H HHQA D L N+F++A+HDL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+++D+
Sbjct: 1   MTHNH-HHQAVDNLLNVFSRASHDLTVVHSKLDKEFQQMYPANANPMKLIQRIKKLQEDV 60

Query: 63  STLKEQCREVLMAKQDVIDKARTVLVGNRNMLQKMQASMGVPFVSDLDDPAFAQFKQITE 122
           + LK QC ++L AKQD+IDKA+T LVGN N++QKM AS+G     D DD A A F QI +
Sbjct: 61  TLLKHQCLDLLSAKQDLIDKAQTTLVGNCNLIQKMNASLGESTNGDTDD-ALADFNQIID 120

Query: 123 EWTTQVQSKFEPEFQISTFPVKMQVTTGGTTDYRIFSPHVAGEDGQEDADCDDVNKLLFS 182
           EWT QV+S+                T G T                EDAD +D+NK+LFS
Sbjct: 121 EWTMQVRSR----------------TVGET----------------EDADKEDINKMLFS 148

Query: 183 AV 185
           A+
Sbjct: 181 AI 148

The following BLAST results are available for this feature:

BLAST of Cla97C05G097070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935897.1	4.6e-69	77.42	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_004145489.1	1.0e-68	76.06	PREDICTED: spindle and kinetochore-associated protein 2 isoform X1 [Cucumis sati...	[more]
XP_022141272.1	1.3e-68	76.76	spindle and kinetochore-associated protein 2 [Momordica charantia]	[more]
XP_008452819.1	5.1e-68	76.06	PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]	[more]
XP_023534877.1	8.7e-68	76.88	spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of Cla97C05G097070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5I9\|A0A0A0L5I9_CUCSA	6.8e-69	76.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651780 PE=4 SV=1	[more]
tr\|A0A1S3BUQ8\|A0A1S3BUQ8_CUCME	3.4e-68	76.06	spindle and kinetochore-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
tr\|A0A2I4G6M5\|A0A2I4G6M5_9ROSI	2.9e-51	57.61	spindle and kinetochore-associated protein 2 isoform X2 OS=Juglans regia OX=5124...	[more]
tr\|A0A2I4G6M6\|A0A2I4G6M6_9ROSI	1.0e-48	55.79	spindle and kinetochore-associated protein 2 isoform X1 OS=Juglans regia OX=5124...	[more]
tr\|A0A1U8P8Y9\|A0A1U8P8Y9_GOSHI	1.9e-47	57.54	spindle and kinetochore-associated protein 2 OS=Gossypium hirsutum OX=3635 GN=LO...	[more]

BLAST of Cla97C05G097070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8WVK7\|SKA2_HUMAN	4.2e-05	32.95	Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=...	[more]
sp\|Q4R8E8\|SKA2_MACFA	1.2e-04	30.68	Spindle and kinetochore-associated protein 2 OS=Macaca fascicularis OX=9541 GN=S...	[more]
sp\|Q2TBY0\|SKA2_BOVIN	2.1e-04	33.33	Spindle and kinetochore-associated protein 2 OS=Bos taurus OX=9913 GN=SKA2 PE=2 ...	[more]

BLAST of Cla97C05G097070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24970.1	2.1e-39	48.35	unknown protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0000940	condensed chromosome outer kinetochore
GO:0005876	spindle microtubule

Vocabulary: **Biological Process**
Term	Definition
GO:0051301	cell division
GO:0007059	chromosome segregation

Vocabulary: **Molecular Function**
Term	Definition
GO:0008017	microtubule binding

Vocabulary: **INTERPRO**
Term	Definition
IPR026762	Ska2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0007059	chromosome segregation
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000940	condensed chromosome outer kinetochore
cellular_component	GO:0005876	spindle microtubule
cellular_component	GO:0045298	tubulin complex
molecular_function	GO:0008017	microtubule binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G097070.1	Cla97C05G097070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026762	Spindle and kinetochore-associated protein 2	PFAM	PF16740	SKA2	coord: 10..118 e-value: 2.2E-41 score: 140.0
IPR026762	Spindle and kinetochore-associated protein 2	PANTHER	PTHR32017	FAMILY NOT NAMED	coord: 11..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G097070	Cla021046	Watermelon (97103) v1	wmwmbB207
Cla97C05G097070	Csa4G651780	Cucumber (Chinese Long) v2	cuwmbB306
Cla97C05G097070	MELO3C016945	Melon (DHL92) v3.5.1	mewmbB484
Cla97C05G097070	ClCG05G016110	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G097070	CSPI04G26060	Wild cucumber (PI 183967)	cpiwmbB315
Cla97C05G097070	Cucsa.271350	Cucumber (Gy14) v1	cgywmbB471
Cla97C05G097070	CmaCh09G003940	Cucurbita maxima (Rimu)	cmawmbB027
Cla97C05G097070	CmoCh09G003960	Cucurbita moschata (Rifu)	cmowmbB015
Cla97C05G097070	Lsi04G013550	Bottle gourd (USVL1VR-Ls)	lsiwmbB289
Cla97C05G097070	CsGy4G024370	Cucumber (Gy14) v2	cgybwmbB289
Cla97C05G097070	MELO3C032324.2	Melon (DHL92) v3.6.1	medwmbB478
Cla97C05G097070	Carg02823	Silver-seed gourd	carwmbB0659
Cla97C05G097070	CsaV3_4G036380	Cucumber (Chinese Long) v3	cucwmbB313
Cla97C05G097070	Bhi09G002498	Wax gourd	wgowmbB580

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G097070	Silver-seed gourd	carwmbB0808
Cla97C05G097070	Cucurbita maxima (Rimu)	cmawmbB480
Cla97C05G097070	Cucurbita moschata (Rifu)	cmowmbB462