Cla97C05G096100 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAATTTGATAACTTGGTAGCCACAGCAAGAGGTGTCGTGTCTATCGATGGAGATCCATTCCAGCGTCTTGGCGCTTACATGGTGGAAGGGTTGGTGGCGAGGAAAGAGGAATCGGGGGTGAATATATATCGGACTCTAAACTATAGAGAGCCTGCAAGTGATGATTAGTTATCTTTTATGCATATGGTATATGAAATCTGCCCCTATTTGAAGTTCGGTTACATGGCAGTGAATGGGGCAATTATCTAGGCCTATGGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGTAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCAAGTGGGCCTCCCCATGTGAGGATAACCGGTATCATTGA ATGAAGGAATTTGATAACTTGGTAGCCACAGCAAGAGGTGTCGTGTCTATCGATGGAGATCCATTCCAGCGTCTTGGCGCTTACATGGTGGAAGGGTTGGTGGCGAGGAAAGAGGAATCGGGGGTGAATATATATCGGACTCTAAACTATAGAGAGCCTGCAATTCGGTTACATGGCAGTGAATGGGGCAATTATCTAGGCCTATGGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGTAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCAAGTGGGCCTCCCCATGTGAGGATAACCGGTATCATTGA ATGAAGGAATTTGATAACTTGGTAGCCACAGCAAGAGGTGTCGTGTCTATCGATGGAGATCCATTCCAGCGTCTTGGCGCTTACATGGTGGAAGGGTTGGTGGCGAGGAAAGAGGAATCGGGGGTGAATATATATCGGACTCTAAACTATAGAGAGCCTGCAATTCGGTTACATGGCAGTGAATGGGGCAATTATCTAGGCCTATGGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGTAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCAAGTGGGCCTCCCCATGTGAGGATAACCGGTATCATTGA MKEFDNLVATARGVVSIDGDPFQRLGAYMVEGLVARKEESGVNIYRTLNYREPAIRLHGSEWGNYLGLWKRRPHPHHRLPDYSGDVVVNSSSGTCSKAKWASPCEDNRYH
BLAST of Cla97C05G096100 vs. NCBI nr
Match: XP_004151967.1 (PREDICTED: scarecrow-like protein 21 [Cucumis sativus] >KGN57951.1 hypothetical protein Csa_3G405510 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 5.3e-17 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of Cla97C05G096100 vs. NCBI nr
Match: XP_008454576.1 (PREDICTED: scarecrow-like protein 21 [Cucumis melo]) HSP 1 Score: 96.7 bits (239), Expect = 5.3e-17 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of Cla97C05G096100 vs. NCBI nr
Match: XP_022940516.1 (scarecrow-like protein 21 [Cucurbita moschata]) HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16 Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of Cla97C05G096100 vs. NCBI nr
Match: XP_022981431.1 (scarecrow-like protein 21 [Cucurbita maxima]) HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16 Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of Cla97C05G096100 vs. NCBI nr
Match: XP_023521994.1 (scarecrow-like protein 21 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16 Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TrEMBL
Match: tr|A0A1S3BYH5|A0A1S3BYH5_CUCME (scarecrow-like protein 21 OS=Cucumis melo OX=3656 GN=LOC103494964 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TrEMBL
Match: tr|A0A0A0LD17|A0A0A0LD17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G405510 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.5e-17 Identity = 46/54 (85.19%), Postives = 48/54 (88.89%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TrEMBL
Match: tr|A0A1U8KK40|A0A1U8KK40_GOSHI (scarecrow-like protein 21 OS=Gossypium hirsutum OX=3635 GN=LOC107917917 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.0e-13 Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TrEMBL
Match: tr|A0A2P5YXD1|A0A2P5YXD1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA00319 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.0e-13 Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TrEMBL
Match: tr|A0A2P5R6Y6|A0A2P5R6Y6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD20520 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.0e-13 Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Cla97C05G096100 vs. Swiss-Prot
Match: sp|Q69VG1|CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-12 Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of Cla97C05G096100 vs. Swiss-Prot
Match: sp|Q8GVE1|CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 6.2e-09 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Cla97C05G096100 vs. Swiss-Prot
Match: sp|Q9S7H5|SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Cla97C05G096100 vs. Swiss-Prot
Match: sp|Q9SDQ3|SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07 Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Cla97C05G096100 vs. Swiss-Prot
Match: sp|Q8H125|SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07 Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TAIR10
Match: AT2G04890.1 (SCARECROW-like 21) HSP 1 Score: 60.8 bits (146), Expect = 5.9e-10 Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TAIR10
Match: AT1G21450.1 (SCARECROW-like 1) HSP 1 Score: 57.0 bits (136), Expect = 8.5e-09 Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TAIR10
Match: AT1G50600.1 (scarecrow-like 5) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08 Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TAIR10
Match: AT4G17230.1 (SCARECROW-like 13) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07 Identity = 25/43 (58.14%), Postives = 29/43 (67.44%), Query Frame = 0
BLAST of Cla97C05G096100 vs. TAIR10
Match: AT5G48150.1 (GRAS family transcription factor) HSP 1 Score: 52.0 bits (123), Expect = 2.7e-07 Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |