Cla97C05G095580 (gene) Watermelon (97103) v2

Overview
NameCla97C05G095580
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptioncation/H(+) antiporter 15-like
LocationCla97Chr05 : 22415451 .. 22416172 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCATTGTAATGGAATCAGACGACATTATTGCCTACATCAATGCCGGAATTTCTCGTACCTCCAAAAACTTCACCACGATATGTACATTTTTCAACGGGCTTCACTGCAATAATGGTATTTTCGTCGTAACAAACCCTTTAGACTTCTTAGTTACTCTTCTTATTAAATAAGGCAATTTGATCTTTGATCCTTCAAGTTTAGAAATTAGTTCTAAATGTTTCCTTAGTTAAGCTGACGGTTGTAAAATGAGATGAGTGATGTGGCCATTTTTTAAGCGAAGTTTCATTTTCTATCCATTTAAAACTACTTTTATCTCATAAGAATTTTTCTTTCTATTATGTGCGTTTTCTTCATTTTTCTATTGGCACATAACAAAGTGATGTCATTTTGAAAATGTTCTTTTCGAAACCTTAGAAACCAAATAGATAGAAATCTCAAACAACAATGAAATTTCCCATAAGTTTTACTAAAAATATATGGAGATGTTTAGTTGTTTTGTTAATAGATGGATATATTTAAGAAAAGAAAAGAAAAGAAATAGACAAATAGGTGAGGGTGTATAGTTAATGGTTATGCAGGCCAGATCAGAATTGAAGTTAAAATTCATCCAAATTTGAACTGGCTTTTTATTGTTCATGAGGTTACCGGTTTTCCCATTAACCATCTTAAAAAATGGGTTCCATTACATAAATCCTCCATACCCATCGAATTTTGA

mRNA sequence

ATGGGTTCCATTGTAATGGAATCAGACGACATTATTGCCTACATCAATGCCGGAATTTCTCGTACCTCCAAAAACTTCACCACGATATGTACATTTTTCAACGGGCTTCACTGCAATAATGGCCAGATCAGAATTGAAGTTAAAATTCATCCAAATTTGAACTGGCTTTTTATTGTTCATGAGGTTACCGGTTTTCCCATTAACCATCTTAAAAAATGGGTTCCATTACATAAATCCTCCATACCCATCGAATTTTGA

Coding sequence (CDS)

ATGGGTTCCATTGTAATGGAATCAGACGACATTATTGCCTACATCAATGCCGGAATTTCTCGTACCTCCAAAAACTTCACCACGATATGTACATTTTTCAACGGGCTTCACTGCAATAATGGCCAGATCAGAATTGAAGTTAAAATTCATCCAAATTTGAACTGGCTTTTTATTGTTCATGAGGTTACCGGTTTTCCCATTAACCATCTTAAAAAATGGGTTCCATTACATAAATCCTCCATACCCATCGAATTTTGA

Protein sequence

MGSIVMESDDIIAYINAGISRTSKNFTTICTFFNGLHCNNGQIRIEVKIHPNLNWLFIVHEVTGFPINHLKKWVPLHKSSIPIEF
Homology
[Close]
BLAST of Cla97C05G095580 vs. NCBI nr
Match: XP_008450215.1 (PREDICTED: cation/H(+) antiporter 15-like [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 8.1e-05
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0 

Query: 1  MGSIVMESDDIIAYINAGIS-RTSKNFTTICTFFNGLHCNN 41
          MGSIVME +DI  YIN GI  R +KNFTTICTF N +HC +
Sbjct: 1  MGSIVMEPNDIATYINGGIGHRPTKNFTTICTFANHIHCTS 41

[Close]
BLAST of Cla97C05G095580 vs. TrEMBL
Match: tr|A0A1S3BNS6|A0A1S3BNS6_CUCME (cation/H(+) antiporter 15-like OS=Cucumis melo OX=3656 GN=LOC103491876 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.3e-05
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0 

Query: 1  MGSIVMESDDIIAYINAGIS-RTSKNFTTICTFFNGLHCNN 41
          MGSIVME +DI  YIN GI  R +KNFTTICTF N +HC +
Sbjct: 1  MGSIVMEPNDIATYINGGIGHRPTKNFTTICTFANHIHCTS 41

The following BLAST results are available for this feature:
BLAST of Cla97C05G095580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008450215.18.1e-0565.85PREDICTED: cation/H(+) antiporter 15-like [Cucumis melo][more]
BLAST of Cla97C05G095580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BNS6|A0A1S3BNS6_CUCME5.3e-0565.85cation/H(+) antiporter 15-like OS=Cucumis melo OX=3656 GN=LOC103491876 PE=4 SV=1[more]
BLAST of Cla97C05G095580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G095580 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006812 cation transport
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0015299 solute:proton antiporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G095580.1Cla97C05G095580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G095580Wax gourdwgowmbB181
Cla97C05G095580Wax gourdwgowmbB573
Cla97C05G095580Watermelon (97103) v2wmbwmbB053
Cla97C05G095580Watermelon (97103) v2wmbwmbB117
Cla97C05G095580Silver-seed gourdcarwmbB0385
Cla97C05G095580Silver-seed gourdcarwmbB0457
Cla97C05G095580Silver-seed gourdcarwmbB0948
Cla97C05G095580Silver-seed gourdcarwmbB1083
Cla97C05G095580Cucumber (Gy14) v2cgybwmbB208
Cla97C05G095580Cucurbita maxima (Rimu)cmawmbB030
Cla97C05G095580Cucurbita maxima (Rimu)cmawmbB126
Cla97C05G095580Cucurbita maxima (Rimu)cmawmbB265
Cla97C05G095580Cucurbita maxima (Rimu)cmawmbB474
Cla97C05G095580Cucurbita moschata (Rifu)cmowmbB018
Cla97C05G095580Cucurbita moschata (Rifu)cmowmbB110
Cla97C05G095580Cucurbita moschata (Rifu)cmowmbB245
Cla97C05G095580Cucurbita moschata (Rifu)cmowmbB455
Cla97C05G095580Wild cucumber (PI 183967)cpiwmbB061
Cla97C05G095580Wild cucumber (PI 183967)cpiwmbB217
Cla97C05G095580Wild cucumber (PI 183967)cpiwmbB223
Cla97C05G095580Cucumber (Chinese Long) v3cucwmbB219
Cla97C05G095580Cucumber (Chinese Long) v2cuwmbB217
Cla97C05G095580Bottle gourd (USVL1VR-Ls)lsiwmbB286
Cla97C05G095580Bottle gourd (USVL1VR-Ls)lsiwmbB402
Cla97C05G095580Melon (DHL92) v3.6.1medwmbB426
Cla97C05G095580Melon (DHL92) v3.6.1medwmbB429
Cla97C05G095580Melon (DHL92) v3.5.1mewmbB438
Cla97C05G095580Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G095580Watermelon (97103) v1wmwmbB068
Cla97C05G095580Watermelon (97103) v1wmwmbB135
Cla97C05G095580Watermelon (97103) v1wmwmbB207